FFCP PHASE1:Hg19::chr7:143085953..143085988,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:143085953..143085988,+ to FFCP PHASE1:Hg19::chr7:143085953..143085988,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:143085953..143085988,+ | |||
|coexpression_cluster_id=C1091 | |||
|description=CAGE_peak_at_chr7:143085953..143085988,+ | |||
|id=chr7:143085953..143085988,+ | |||
|ontology_enrichment_celltype=CL:0002371!6.18e-26!591;CL:0000144!1.57e-25!625;CL:0000548!3.84e-19!679;CL:0000004!3.84e-19!679;CL:0000255!3.84e-19!679;CL:0000012!5.27e-18!682;CL:0000723!3.27e-16!436;CL:0000048!6.26e-16!430;CL:0000034!7.57e-16!444;CL:0000055!4.63e-14!180;CL:0000003!8.47e-14!722;CL:0000222!9.13e-13!119;CL:0000183!5.40e-11!59;CL:0000057!1.44e-10!75;CL:0000680!1.73e-09!57;CL:0000056!1.73e-09!57;CL:0000355!1.73e-09!57;CL:0000063!1.86e-09!578;CL:0000187!2.11e-09!54;CL:0002320!9.59e-09!365;CL:0000192!1.28e-08!42;CL:0000514!1.28e-08!42;CL:0002057!1.49e-08!42;CL:0000393!2.37e-08!60;CL:0000211!2.37e-08!60;CL:0000860!2.65e-08!45;CL:0000220!3.40e-08!246;CL:0002321!3.69e-08!248;CL:0000134!8.62e-08!358;CL:0000766!1.74e-07!76;CL:0000359!6.38e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-09;33!CL:0002057;1.52e-09;33!CL:0000473;6.86e-09;39!CL:0000234;6.86e-09;39!CL:0000192;3.94e-07;43!CL:0002334;8.52e-07;12!CL:0000359;9.96e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.56e-19,433;CL:0000034,3.00e-19,441;CL:0000048,1.23e-18,427;CL:0000473,2.29e-11,48;CL:0000234,2.29e-11,48;CL:0000222,4.04e-11,121;CL:0002320,1.02e-10,361;CL:0000057,1.10e-10,76;CL:0000860,4.43e-10,42;CL:0002057,4.43e-10,42;CL:0000134,6.91e-10,354;CL:0000680,1.20e-09,58;CL:0000056,1.20e-09,58;CL:0000355,1.20e-09,58;CL:0000187,1.60e-09,55;CL:0000192,1.27e-08,43;CL:0000514,1.27e-08,43;CL:0000766,8.16e-08,72;CL:0000393,9.63e-08,61;CL:0000211,9.63e-08,61;CL:0002194,1.36e-07,59;CL:0000576,1.36e-07,59;CL:0000040,1.36e-07,59;CL:0000559,1.36e-07,59;CL:0000219,1.92e-07,386;CL:0002334,6.17e-07,12;CL:0000359,6.51e-07,32;CL:0002009,6.72e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-07;42!CL:0000514;3.94e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.38e-16!216;UBERON:0002204!2.57e-13!167;UBERON:0000926!6.35e-13!448;UBERON:0004120!6.35e-13!448;UBERON:0006603!6.35e-13!448;UBERON:0000486!3.14e-11!82;UBERON:0004535!4.07e-11!110;UBERON:0000914!1.34e-10!83;UBERON:0002329!1.34e-10!83;UBERON:0003077!1.34e-10!83;UBERON:0003059!1.34e-10!83;UBERON:0007282!1.34e-10!83;UBERON:0009618!1.34e-10!83;UBERON:0007285!1.34e-10!83;UBERON:0004290!1.42e-10!70;UBERON:0002049!1.50e-10!79;UBERON:0007798!1.50e-10!79;UBERON:0001009!2.56e-10!113;UBERON:0000055!1.06e-09!69;UBERON:0004872!1.42e-09!84;UBERON:0001637!1.98e-09!42;UBERON:0003509!1.98e-09!42;UBERON:0004572!1.98e-09!42;UBERON:0001981!4.65e-09!60;UBERON:0007500!4.65e-09!60;UBERON:0004537!4.65e-09!60;UBERON:0006965!4.65e-09!60;UBERON:0001134!1.62e-08!61;UBERON:0002036!1.62e-08!61;UBERON:0003082!1.62e-08!61;UBERON:0002385!4.31e-08!63;UBERON:0001015!4.31e-08!63;UBERON:0000383!4.31e-08!63;UBERON:0000468!4.36e-08!659;UBERON:0005256!4.45e-08!143;UBERON:0002384!5.35e-08!375;UBERON:0003102!9.44e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.17e-07;42!UBERON:0003509;6.17e-07;42!UBERON:0004572;6.17e-07;42 | |||
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| ||
|short_description=p@chr7:143085953..143085988,+ | |||
}} | }} |
Latest revision as of 07:07, 31 July 2015
Short description: | p@chr7:143085953..143085988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:143085953..143085988, + |
Coexpression cluster: | C1091_Neutrophils_Mesenchymal_Monocytederived_Smooth_Hepatic_Prostate_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.56e-19 | 433 |
stem cell | 3.00e-19 | 441 |
multi fate stem cell | 1.23e-18 | 427 |
defensive cell | 2.29e-11 | 48 |
phagocyte | 2.29e-11 | 48 |
mesodermal cell | 4.04e-11 | 121 |
connective tissue cell | 1.02e-10 | 361 |
fibroblast | 1.10e-10 | 76 |
classical monocyte | 4.43e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.43e-10 | 42 |
mesenchymal cell | 6.91e-10 | 354 |
muscle precursor cell | 1.20e-09 | 58 |
myoblast | 1.20e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-09 | 58 |
muscle cell | 1.60e-09 | 55 |
smooth muscle cell | 1.27e-08 | 43 |
smooth muscle myoblast | 1.27e-08 | 43 |
myeloid leukocyte | 8.16e-08 | 72 |
electrically responsive cell | 9.63e-08 | 61 |
electrically active cell | 9.63e-08 | 61 |
monopoietic cell | 1.36e-07 | 59 |
monocyte | 1.36e-07 | 59 |
monoblast | 1.36e-07 | 59 |
promonocyte | 1.36e-07 | 59 |
motile cell | 1.92e-07 | 386 |
preadipocyte | 6.17e-07 | 12 |
vascular associated smooth muscle cell | 6.51e-07 | 32 |
macrophage dendritic cell progenitor | 6.72e-07 | 61 |