FFCP PHASE1:Hg19::chr7:27141947..27141965,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27141947..27141965,- to FFCP PHASE1:Hg19::chr7:27141947..27141965,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=156bp_to_AB464572_5end | |||
|cluster_id=chr7:27141947..27141965,- | |||
|description=CAGE_peak_1_at_AB464572_5end | |||
|id=chr7:27141947..27141965,- | |||
|ontology_enrichment_celltype=CL:0000222!1.18e-14!119;CL:0000213!8.34e-10!57;CL:0000215!8.34e-10!57;CL:0002321!3.10e-08!248;CL:0002681!4.75e-08!13;CL:0002584!4.75e-08!13;CL:0000220!9.73e-08!246;CL:1000449!2.33e-07!16;CL:1000507!6.84e-07!12;CL:1000494!6.84e-07!12;CL:0000183!8.55e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.03e-10;2!CL:1000500;2.03e-10;2!CL:1000618;2.03e-10;2!CL:1001318;2.03e-10;2!CL:0002262;2.03e-10;2!CL:1000398;2.03e-10;2!CL:0002173;2.03e-10;2!CL:0000077;7.41e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.26e-10,2;CL:1000398,1.26e-10,2;CL:0000650,1.46e-10,2;CL:1000500,1.46e-10,2;CL:1000618,1.46e-10,2;CL:1001318,1.46e-10,2;CL:0002173,1.46e-10,2;CL:0000222,6.62e-09,121;CL:0000077,6.68e-09,19;CL:1000746,9.99e-07,7;CL:1000612,9.99e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.80e-07;3!UBERON:0003057;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!4.32e-10!17;UBERON:0000055!2.90e-09!69;UBERON:0003914!3.65e-09!118;UBERON:0000483!6.39e-09!309;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0000119!1.28e-08!312;UBERON:0009569!1.41e-08!113;UBERON:0002100!2.65e-08!216;UBERON:0000025!2.69e-08!194;UBERON:0001225!4.75e-08!13;UBERON:0008987!4.75e-08!13;UBERON:0006555!4.76e-08!17;UBERON:0005103!4.76e-08!17;UBERON:0000083!4.76e-08!17;UBERON:0009201!4.76e-08!17;UBERON:0004819!4.76e-08!17;UBERON:0006553!4.76e-08!17;UBERON:0003074!4.76e-08!17;UBERON:0003060!4.76e-08!17;UBERON:0003887!4.92e-08!21;UBERON:0004872!9.01e-08!84;UBERON:0005177!1.24e-07!107;UBERON:0004876!1.36e-07!20;UBERON:0004573!1.38e-07!33;UBERON:0004571!1.38e-07!33;UBERON:0000489!1.43e-07!32;UBERON:0002049!1.52e-07!79;UBERON:0007798!1.52e-07!79;UBERON:0000080!2.03e-07!18;UBERON:0002120!2.03e-07!18;UBERON:0004875!2.03e-07!18;UBERON:0005721!2.03e-07!18;UBERON:0005754!2.03e-07!18;UBERON:0007297!2.03e-07!18;UBERON:0001851!2.28e-07!16;UBERON:0004211!2.33e-07!16;UBERON:0001285!2.33e-07!16;UBERON:0007684!2.33e-07!16;UBERON:0003220!2.33e-07!16;UBERON:0004208!2.33e-07!16;UBERON:0000947!5.18e-07!21;UBERON:0010191!5.18e-07!21;UBERON:0002385!5.86e-07!63;UBERON:0001015!5.86e-07!63;UBERON:0000383!5.86e-07!63;UBERON:0009773!6.84e-07!12;UBERON:0001231!6.84e-07!12;UBERON:0004810!6.84e-07!12;UBERON:0001134!9.32e-07!61;UBERON:0002036!9.32e-07!61;UBERON:0003082!9.32e-07!61;UBERON:0004111!9.63e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;2.89e-11;7!UBERON:0000353;8.84e-11;15!UBERON:0001281;2.03e-10;2!UBERON:0003497;2.03e-10;2!UBERON:0003909;2.03e-10;2!UBERON:0003567;2.03e-10;2!UBERON:0003835;2.03e-10;2!UBERON:0003838;2.03e-10;2!UBERON:0003586;2.03e-10;2!UBERON:0005169;2.03e-10;2!UBERON:0002321;2.03e-10;2!UBERON:0005215;2.03e-10;2!UBERON:0002303;2.03e-10;2!UBERON:0002319;2.03e-10;2!UBERON:0002240;1.80e-07;3!UBERON:0005174;1.80e-07;3!UBERON:0001137;1.80e-07;3!UBERON:0001280;3.20e-07;3!UBERON:0004647;3.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.11e-11,7;UBERON:0000353,5.86e-11,15;UBERON:0001281,1.26e-10,2;UBERON:0003497,1.26e-10,2;UBERON:0003909,1.26e-10,2;UBERON:0003835,1.26e-10,2;UBERON:0003567,1.46e-10,2;UBERON:0003838,1.46e-10,2;UBERON:0003586,1.46e-10,2;UBERON:0005169,1.46e-10,2;UBERON:0002321,1.46e-10,2;UBERON:0005215,1.46e-10,2;UBERON:0002303,1.46e-10,2;UBERON:0002319,1.46e-10,2;UBERON:0002240,1.18e-07,3;UBERON:0005174,1.18e-07,3;UBERON:0001137,1.18e-07,3;UBERON:0001280,2.34e-07,3;UBERON:0004647,2.34e-07,3;UBERON:0005171,2.34e-07,3;UBERON:0010532,9.99e-07,7;UBERON:0000074,9.99e-07,7;UBERON:0001229,9.99e-07,7;UBERON:0001230,9.99e-07,7;UBERON:0003220,9.99e-07,7;UBERON:0005749,9.99e-07,7;UBERON:0004199,9.99e-07,7;UBERON:0004209,9.99e-07,7;UBERON:0004198,9.99e-07,7 | |||
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| ||
|short_description=p1@AB464572 | |||
}} | }} |
Latest revision as of 08:59, 31 July 2015
Short description: | p1@AB464572 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464572_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_AB464572_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.26e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.26e-10 | 2 |
mesangial cell | 1.46e-10 | 2 |
kidney interstitial cell | 1.46e-10 | 2 |
juxtaglomerular complex cell | 1.46e-10 | 2 |
renal interstitial pericyte | 1.46e-10 | 2 |
extraglomerular mesangial cell | 1.46e-10 | 2 |
mesodermal cell | 6.62e-09 | 121 |
mesothelial cell | 6.68e-09 | 19 |
glomerular cell | 9.99e-07 | 7 |
kidney corpuscule cell | 9.99e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 3.11e-11 | 7 |
parenchyma | 5.86e-11 | 15 |
hepatic sinusoid | 1.26e-10 | 2 |
abdomen blood vessel | 1.26e-10 | 2 |
sinusoid | 1.26e-10 | 2 |
abdominal segment blood vessel | 1.26e-10 | 2 |
abdomen connective tissue | 1.46e-10 | 2 |
abdominal segment connective tissue | 1.46e-10 | 2 |
trunk connective tissue | 1.46e-10 | 2 |
interstitial tissue | 1.46e-10 | 2 |
extraglomerular mesangium | 1.46e-10 | 2 |
kidney interstitium | 1.46e-10 | 2 |
juxtaglomerular apparatus | 1.46e-10 | 2 |
mesangium | 1.46e-10 | 2 |
spinal cord | 1.18e-07 | 3 |
dorsal region element | 1.18e-07 | 3 |
dorsum | 1.18e-07 | 3 |
liver parenchyma | 2.34e-07 | 3 |
liver lobule | 2.34e-07 | 3 |
hepatic duct | 2.34e-07 | 3 |
primitive nephron | 9.99e-07 | 7 |
renal glomerulus | 9.99e-07 | 7 |
renal corpuscle | 9.99e-07 | 7 |
glomerular capsule | 9.99e-07 | 7 |
metanephric mesenchyme | 9.99e-07 | 7 |
glomerular tuft | 9.99e-07 | 7 |
S-shaped body | 9.99e-07 | 7 |
renal vesicle | 9.99e-07 | 7 |
comma-shaped body | 9.99e-07 | 7 |