FFCP PHASE1:Hg19::chr8:41435743..41435781,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:41435743..41435781,+ to FFCP PHASE1:Hg19::chr8:41435743..41435781,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=137964 | |EntrezGene=137964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20880 | |HGNC=20880 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIA1 | |UniProt=E5RIA1 | ||
|association_with_transcript=9bp_to_ENST00000519853_5end | |||
|cluster_id=chr8:41435743..41435781,+ | |||
|coexpression_cluster_id=C1903 | |||
|description=CAGE_peak_2_at_AGPAT6_5end | |||
|id=chr8:41435743..41435781,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.18e-19!42;CL:0000860!6.87e-19!45;CL:0000766!1.20e-18!76;CL:0000548!1.32e-15!679;CL:0000004!1.32e-15!679;CL:0000255!1.32e-15!679;CL:0000012!1.33e-15!682;CL:0000839!3.21e-15!70;CL:0000557!8.37e-15!71;CL:0000144!1.62e-14!625;CL:0002009!1.68e-14!65;CL:0002194!3.49e-14!63;CL:0000576!3.49e-14!63;CL:0000040!3.49e-14!63;CL:0000559!3.49e-14!63;CL:0000219!1.56e-13!390;CL:0000763!1.63e-13!112;CL:0000049!1.63e-13!112;CL:0002371!1.64e-13!591;CL:0000738!4.92e-13!140;CL:0000003!8.91e-13!722;CL:0000034!7.29e-12!444;CL:0000048!4.57e-11!430;CL:0000723!5.28e-11!436;CL:0000063!1.07e-10!578;CL:0000988!1.16e-09!182;CL:0000134!1.59e-09!358;CL:0000037!1.61e-09!172;CL:0000566!1.61e-09!172;CL:0002032!7.41e-09!165;CL:0000837!7.41e-09!165;CL:0002031!1.20e-08!124;CL:0002320!2.24e-08!365;CL:0002087!2.54e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.77e-16;33!CL:0002057;3.77e-16;33!CL:0000576;3.36e-11;48!CL:0000473;5.93e-11;39!CL:0000234;5.93e-11;39!CL:0000766;1.41e-09;69!CL:0000148;5.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.04e-19,42;CL:0002057,3.04e-19,42;CL:0000766,9.84e-19,72;CL:0000473,7.63e-16,48;CL:0000234,7.63e-16,48;CL:0000839,2.98e-15,66;CL:0000557,8.09e-15,67;CL:0002009,1.50e-14,61;CL:0002194,3.09e-14,59;CL:0000576,3.09e-14,59;CL:0000040,3.09e-14,59;CL:0000559,3.09e-14,59;CL:0000763,2.53e-13,108;CL:0000049,2.53e-13,108;CL:0000219,5.20e-13,386;CL:0000738,8.70e-13,136;CL:0000034,4.00e-11,441;CL:0000048,2.37e-10,427;CL:0000723,2.68e-10,433;CL:0000988,3.00e-09,177;CL:0000037,3.07e-09,168;CL:0000134,4.34e-09,354;CL:0002032,1.40e-08,161;CL:0000837,1.40e-08,161;CL:0002031,2.08e-08,120;CL:0002087,4.37e-08,115;CL:0002320,5.79e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.57e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.32e-15!86;UBERON:0002371!4.35e-15!80;UBERON:0002390!1.03e-13!102;UBERON:0003061!1.03e-13!102;UBERON:0004765!1.57e-13!101;UBERON:0001434!1.57e-13!101;UBERON:0002193!1.77e-13!112;UBERON:0002405!2.04e-11!115;UBERON:0003081!1.93e-10!216;UBERON:0002384!1.11e-08!375;UBERON:0002204!3.06e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.61e-15,82;UBERON:0002371,4.65e-15,76;UBERON:0002405,9.11e-14,93;UBERON:0002390,1.38e-13,98;UBERON:0003061,1.38e-13,98;UBERON:0002193,2.52e-13,108;UBERON:0004765,9.33e-13,90;UBERON:0001434,6.38e-12,100;UBERON:0003081,5.51e-10,203;UBERON:0002384,2.98e-08,371;UBERON:0002204,5.55e-07,167 | |||
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| ||
|short_description=p2@AGPAT6 | |||
}} | }} |
Latest revision as of 06:31, 18 September 2015
Short description: | p2@AGPAT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGPAT6_5end |
Coexpression cluster: | C1903_Neutrophils_Melanocyte_melanoma_large_Eosinophils_Dendritic_smallcell |
Association with transcript: | 9bp_to_ENST00000519853_5end |
EntrezGene: | AGPAT6 |
HGNC: | 20880 |
UniProt: | E5RIA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.04e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.04e-19 | 42 |
myeloid leukocyte | 9.84e-19 | 72 |
defensive cell | 7.63e-16 | 48 |
phagocyte | 7.63e-16 | 48 |
myeloid lineage restricted progenitor cell | 2.98e-15 | 66 |
granulocyte monocyte progenitor cell | 8.09e-15 | 67 |
macrophage dendritic cell progenitor | 1.50e-14 | 61 |
monopoietic cell | 3.09e-14 | 59 |
monocyte | 3.09e-14 | 59 |
monoblast | 3.09e-14 | 59 |
promonocyte | 3.09e-14 | 59 |
myeloid cell | 2.53e-13 | 108 |
common myeloid progenitor | 2.53e-13 | 108 |
motile cell | 5.20e-13 | 386 |
leukocyte | 8.70e-13 | 136 |
stem cell | 4.00e-11 | 441 |
multi fate stem cell | 2.37e-10 | 427 |
somatic stem cell | 2.68e-10 | 433 |
hematopoietic cell | 3.00e-09 | 177 |
hematopoietic stem cell | 3.07e-09 | 168 |
mesenchymal cell | 4.34e-09 | 354 |
hematopoietic oligopotent progenitor cell | 1.40e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 2.08e-08 | 120 |
nongranular leukocyte | 4.37e-08 | 115 |
connective tissue cell | 5.79e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.61e-15 | 82 |
bone marrow | 4.65e-15 | 76 |
immune system | 9.11e-14 | 93 |
hematopoietic system | 1.38e-13 | 98 |
blood island | 1.38e-13 | 98 |
hemolymphoid system | 2.52e-13 | 108 |
skeletal element | 9.33e-13 | 90 |
skeletal system | 6.38e-12 | 100 |
lateral plate mesoderm | 5.51e-10 | 203 |
connective tissue | 2.98e-08 | 371 |
musculoskeletal system | 5.55e-07 | 167 |