FFCP PHASE1:Hg19::chr9:116263811..116263822,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:116263811..116263822,+ to FFCP PHASE1:Hg19::chr9:116263811..116263822,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUB2 | |UniProt=B3KUB2 | ||
|association_with_transcript=24bp_to_ENST00000394646_5end | |||
|cluster_id=chr9:116263811..116263822,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_14_at_RGS3_5end | |||
|id=chr9:116263811..116263822,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.87e-37!24;CL:0000115!4.84e-35!35;CL:0000071!2.60e-28!18;CL:0002546!2.60e-28!18;CL:0002078!1.27e-25!44;CL:0000213!2.11e-17!57;CL:0000215!2.11e-17!57;CL:1000413!5.63e-15!9;CL:0002543!1.27e-10!6;CL:0002544!1.51e-10!6;CL:0005020!1.82e-10!6;CL:0002138!1.82e-10!6;CL:0005022!1.82e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.91e-87;24!CL:0000115;1.54e-74;36!CL:0000071;1.64e-65;18!CL:0002078;4.09e-44;45!CL:1000413;1.49e-33;9!CL:0000213;2.06e-31;58!CL:0000215;2.06e-31;58!CL:0002543;4.62e-23;6!CL:0002544;6.01e-23;6!CL:0002138;1.05e-22;6!CL:0002618;2.91e-12;3!CL:0002188;4.14e-12;5!CL:0002144;4.92e-12;3!CL:0000076;7.07e-10;63!CL:0002545;7.57e-09;2!CL:0002262;1.15e-08;2!CL:1000398;1.15e-08;2!CL:1000746;1.17e-08;7!CL:1000612;1.17e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.53e-89,36;CL:0002139,5.68e-87,24;CL:0002078,2.04e-69,45;CL:0000071,1.92e-65,18;CL:0002546,1.92e-65,18;CL:0000213,4.36e-52,58;CL:0000215,4.36e-52,58;CL:1000413,1.80e-33,9;CL:0002543,4.38e-23,6;CL:0002544,6.62e-23,6;CL:0005020,1.04e-22,6;CL:0002138,1.04e-22,6;CL:0005022,1.04e-22,6;CL:0000222,6.49e-21,121;CL:0000076,2.39e-15,63;CL:0002618,2.76e-12,3;CL:0002188,4.66e-12,5;CL:0002144,5.02e-12,3;CL:0002545,8.18e-09,2;CL:0002262,1.07e-08,2;CL:1000398,1.07e-08,2;CL:1000746,1.27e-08,7;CL:1000612,1.27e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.64e-65;18!CL:0005022;1.05e-22;6!CL:0000222;1.88e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-58!115;UBERON:0001986!2.60e-28!18;UBERON:0004638!2.60e-28!18;UBERON:0004852!2.60e-28!18;UBERON:0004111!3.63e-27!241;UBERON:0000477!1.02e-24!286;UBERON:0000025!1.77e-24!194;UBERON:0000487!5.93e-22!22;UBERON:0001049!9.00e-21!57;UBERON:0005068!9.00e-21!57;UBERON:0006241!9.00e-21!57;UBERON:0007135!9.00e-21!57;UBERON:0006914!1.53e-18!25;UBERON:0002616!4.05e-17!59;UBERON:0003075!5.11e-17!86;UBERON:0007284!5.11e-17!86;UBERON:0000055!1.57e-16!69;UBERON:0001017!7.87e-16!82;UBERON:0002346!1.02e-15!90;UBERON:0005743!1.13e-15!86;UBERON:0000955!4.06e-15!69;UBERON:0006238!4.06e-15!69;UBERON:0003915!5.63e-15!9;UBERON:0004700!5.63e-15!9;UBERON:0001917!5.63e-15!9;UBERON:0000483!9.02e-15!309;UBERON:0000119!2.14e-14!312;UBERON:0003080!2.56e-14!42;UBERON:0002780!2.87e-13!41;UBERON:0001890!2.87e-13!41;UBERON:0006240!2.87e-13!41;UBERON:0000073!4.13e-13!94;UBERON:0001016!4.13e-13!94;UBERON:0002049!4.31e-13!79;UBERON:0007798!4.31e-13!79;UBERON:0004872!8.98e-13!84;UBERON:0001009!2.98e-12!113;UBERON:0002465!7.12e-12!10;UBERON:0001981!4.56e-11!60;UBERON:0007500!4.56e-11!60;UBERON:0004537!4.56e-11!60;UBERON:0006965!4.56e-11!60;UBERON:0004535!1.36e-10!110;UBERON:0001893!2.16e-10!34;UBERON:0002020!3.46e-10!34;UBERON:0003528!3.46e-10!34;UBERON:0001473!5.82e-10!8;UBERON:0004536!5.82e-10!8;UBERON:0006558!5.82e-10!8;UBERON:0000467!9.10e-10!625;UBERON:0002298!1.04e-09!8;UBERON:0000480!1.07e-09!626;UBERON:0002791!1.28e-09!33;UBERON:0000468!1.29e-09!659;UBERON:0001869!6.84e-09!32;UBERON:0003914!7.40e-09!118;UBERON:0000153!7.41e-09!129;UBERON:0007811!7.41e-09!129;UBERON:0003056!1.12e-08!61;UBERON:0001638!1.20e-08!9;UBERON:0003920!1.20e-08!9;UBERON:0004582!1.20e-08!9;UBERON:0003076!8.06e-08!15;UBERON:0003057!8.06e-08!15;UBERON:0000064!1.11e-07!219;UBERON:0000033!1.75e-07!123;UBERON:0003103!4.97e-07!69;UBERON:0004121!5.84e-07!169;UBERON:0004733!9.51e-07!12;UBERON:0002028!9.51e-07!12;UBERON:0007277!9.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.64e-65;18!UBERON:0001986;1.64e-65;18!UBERON:0004852;1.64e-65;18!UBERON:0000487;9.95e-53;22!UBERON:0006914;7.95e-46;25!UBERON:0003915;1.49e-33;9!UBERON:0004700;1.49e-33;9!UBERON:0001917;1.49e-33;9!UBERON:0000490;7.00e-31;33!UBERON:0000055;5.45e-19;65!UBERON:0001473;7.42e-17;8!UBERON:0004536;7.42e-17;8!UBERON:0006558;7.42e-17;8!UBERON:0001638;3.88e-15;9!UBERON:0003920;3.88e-15;9!UBERON:0004582;3.88e-15;9!UBERON:0007500;3.50e-14;56!UBERON:0001981;3.50e-14;56!UBERON:0004537;3.50e-14;56!UBERON:0002465;2.42e-13;10!UBERON:0002049;3.46e-12;75!UBERON:0007798;3.46e-12;75!UBERON:0010523;4.92e-12;3!UBERON:0001915;4.92e-12;3!UBERON:0001982;4.92e-12;3!UBERON:0003914;2.15e-11;74!UBERON:0000025;1.37e-09;93!UBERON:0001009;3.88e-09;112!UBERON:0005800;7.57e-09;2!UBERON:0001515;7.57e-09;2!UBERON:0004535;7.81e-09;109!UBERON:0001281;1.15e-08;2!UBERON:0003497;1.15e-08;2!UBERON:0003909;1.15e-08;2!UBERON:0003835;1.15e-08;2!UBERON:0000074;1.17e-08;7!UBERON:0001229;1.17e-08;7!UBERON:0000353;2.07e-08;15!UBERON:0002405;1.10e-07;27!UBERON:0002066;1.65e-07;5!UBERON:0004111;5.80e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.92e-65,18;UBERON:0001986,1.92e-65,18;UBERON:0004852,1.92e-65,18;UBERON:0000487,1.13e-52,22;UBERON:0006914,8.90e-46,25;UBERON:0000055,2.69e-34,68;UBERON:0003915,1.80e-33,9;UBERON:0004700,1.80e-33,9;UBERON:0001917,1.80e-33,9;UBERON:0002049,5.47e-29,78;UBERON:0007798,5.47e-29,78;UBERON:0007500,2.55e-23,59;UBERON:0001981,2.55e-23,59;UBERON:0004537,2.55e-23,59;UBERON:0006965,2.55e-23,59;UBERON:0004872,3.80e-22,83;UBERON:0004535,4.49e-22,109;UBERON:0001009,2.77e-21,112;UBERON:0001473,7.34e-17,8;UBERON:0004536,7.34e-17,8;UBERON:0006558,7.34e-17,8;UBERON:0003914,1.01e-16,117;UBERON:0001638,3.75e-15,9;UBERON:0003920,3.75e-15,9;UBERON:0004582,3.75e-15,9;UBERON:0004111,2.46e-14,240;UBERON:0002465,2.40e-13,10;UBERON:0010523,5.02e-12,3;UBERON:0001915,5.02e-12,3;UBERON:0001982,5.02e-12,3;UBERON:0000025,6.57e-11,192;UBERON:0003887,1.91e-10,12;UBERON:0003081,3.53e-09,203;UBERON:0005800,8.18e-09,2;UBERON:0001515,8.18e-09,2;UBERON:0001281,1.07e-08,2;UBERON:0003497,1.07e-08,2;UBERON:0003909,1.07e-08,2;UBERON:0003835,1.07e-08,2;UBERON:0010532,1.27e-08,7;UBERON:0000074,1.27e-08,7;UBERON:0001229,1.27e-08,7;UBERON:0001230,1.27e-08,7;UBERON:0003220,1.27e-08,7;UBERON:0005749,1.27e-08,7;UBERON:0004199,1.27e-08,7;UBERON:0004209,1.27e-08,7;UBERON:0004198,1.27e-08,7;UBERON:0000058,1.38e-08,19;UBERON:0000353,2.13e-08,15;UBERON:0004876,3.66e-08,11;UBERON:0005103,1.51e-07,8;UBERON:0000083,1.51e-07,8;UBERON:0009201,1.51e-07,8;UBERON:0006553,1.51e-07,8;UBERON:0003074,1.51e-07,8;UBERON:0003060,1.51e-07,8;UBERON:0002066,1.59e-07,5;UBERON:0000926,2.80e-07,315;UBERON:0004120,2.80e-07,315;UBERON:0006603,2.80e-07,315;UBERON:0000490,5.02e-07,148 | |||
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|short_description=p14@RGS3 | |||
}} | }} |
Latest revision as of 07:06, 20 September 2015
Short description: | p14@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RGS3_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 24bp_to_ENST00000394646_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | B3KUB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.53e-89 | 36 |
endothelial cell of vascular tree | 5.68e-87 | 24 |
meso-epithelial cell | 2.04e-69 | 45 |
blood vessel endothelial cell | 1.92e-65 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-65 | 18 |
lining cell | 4.36e-52 | 58 |
barrier cell | 4.36e-52 | 58 |
endothelial cell of artery | 1.80e-33 | 9 |
vein endothelial cell | 4.38e-23 | 6 |
aortic endothelial cell | 6.62e-23 | 6 |
lymphangioblast | 1.04e-22 | 6 |
endothelial cell of lymphatic vessel | 1.04e-22 | 6 |
vascular lymphangioblast | 1.04e-22 | 6 |
mesodermal cell | 6.49e-21 | 121 |
squamous epithelial cell | 2.39e-15 | 63 |
endothelial cell of umbilical vein | 2.76e-12 | 3 |
glomerular endothelial cell | 4.66e-12 | 5 |
capillary endothelial cell | 5.02e-12 | 3 |
thoracic aorta endothelial cell | 8.18e-09 | 2 |
endothelial cell of sinusoid | 1.07e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-08 | 2 |
glomerular cell | 1.27e-08 | 7 |
kidney corpuscule cell | 1.27e-08 | 7 |