FFCP PHASE1:Hg19::chrX:48900782..48900793,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48900782..48900793,- to FFCP PHASE1:Hg19::chrX:48900782..48900793,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7030 | |EntrezGene=7030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11752 | |HGNC=11752 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_ENST00000493583_5end | |||
|cluster_id=chrX:48900782..48900793,- | |||
|description=CAGE_peak_3_at_TFE3_5end | |||
|id=chrX:48900782..48900793,- | |||
|ontology_enrichment_celltype=CL:0000055!8.31e-22!180;CL:0000548!1.29e-21!679;CL:0000004!1.29e-21!679;CL:0000255!1.29e-21!679;CL:0000144!7.13e-21!625;CL:0002371!1.81e-20!591;CL:0000012!1.95e-20!682;CL:0000220!1.92e-14!246;CL:0002321!2.12e-14!248;CL:0000057!4.80e-14!75;CL:0000222!2.44e-13!119;CL:0000003!2.80e-12!722;CL:0000680!4.06e-12!57;CL:0000056!4.06e-12!57;CL:0000355!4.06e-12!57;CL:0000183!8.10e-12!59;CL:0000187!6.33e-11!54;CL:0000192!1.88e-09!42;CL:0000514!1.88e-09!42;CL:0000393!2.64e-09!60;CL:0000211!2.64e-09!60;CL:0000359!5.66e-08!32;CL:0000063!7.43e-08!578;CL:0000723!6.49e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.10e-08;43!CL:0000359;4.06e-08;32!CL:0000057;6.28e-07;73!CL:0002620;9.62e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.54e-16,76;CL:0002321,2.99e-14,250;CL:0000680,2.07e-13,58;CL:0000056,2.07e-13,58;CL:0000355,2.07e-13,58;CL:0000222,2.53e-13,121;CL:0000723,2.16e-12,433;CL:0000187,5.05e-12,55;CL:0000034,6.27e-12,441;CL:0000048,1.35e-11,427;CL:0000192,2.80e-10,43;CL:0000514,2.80e-10,43;CL:0000393,7.78e-10,61;CL:0000211,7.78e-10,61;CL:0000359,5.07e-08,32;CL:0002620,2.56e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.10e-08;43!CL:0000355;2.10e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.55e-14!143;UBERON:0000914!1.41e-13!83;UBERON:0002329!1.41e-13!83;UBERON:0003077!1.41e-13!83;UBERON:0003059!1.41e-13!83;UBERON:0007282!1.41e-13!83;UBERON:0009618!1.41e-13!83;UBERON:0007285!1.41e-13!83;UBERON:0000486!6.37e-13!82;UBERON:0004290!2.68e-12!70;UBERON:0000468!5.41e-12!659;UBERON:0000467!5.88e-12!625;UBERON:0000480!9.05e-12!626;UBERON:0002100!2.41e-11!216;UBERON:0000475!2.55e-10!365;UBERON:0001134!4.12e-10!61;UBERON:0002036!4.12e-10!61;UBERON:0003082!4.12e-10!61;UBERON:0002204!9.03e-10!167;UBERON:0002385!2.45e-09!63;UBERON:0001015!2.45e-09!63;UBERON:0000383!2.45e-09!63;UBERON:0003102!6.83e-09!95;UBERON:0000926!8.48e-09!448;UBERON:0004120!8.48e-09!448;UBERON:0006603!8.48e-09!448;UBERON:0002199!5.79e-08!45;UBERON:0002416!5.79e-08!45;UBERON:0000922!5.95e-08!612;UBERON:0002050!6.85e-08!605;UBERON:0005423!6.85e-08!605;UBERON:0000923!7.04e-08!604;UBERON:0005291!7.04e-08!604;UBERON:0006598!7.04e-08!604;UBERON:0002532!7.04e-08!604;UBERON:0000119!3.47e-07!312;UBERON:0001637!3.97e-07!42;UBERON:0003509!3.97e-07!42;UBERON:0004572!3.97e-07!42;UBERON:0003914!4.32e-07!118;UBERON:0000483!4.54e-07!309;UBERON:0002097!4.86e-07!40;UBERON:0003104!7.72e-07!238;UBERON:0009142!7.72e-07!238;UBERON:0000490!8.49e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;7.60e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.03e-15,78;UBERON:0000486,1.96e-14,83;UBERON:0002329,6.25e-14,71;UBERON:0003059,6.25e-14,71;UBERON:0007282,6.25e-14,71;UBERON:0004290,6.25e-14,71;UBERON:0009618,6.25e-14,71;UBERON:0003077,1.95e-13,72;UBERON:0007285,1.95e-13,72;UBERON:0007524,2.20e-13,73;UBERON:0005256,3.14e-12,122;UBERON:0002204,7.30e-12,167;UBERON:0001134,2.34e-11,62;UBERON:0002036,2.34e-11,62;UBERON:0003082,2.34e-11,62;UBERON:0000926,1.06e-10,315;UBERON:0004120,1.06e-10,315;UBERON:0006603,1.06e-10,315;UBERON:0002385,1.88e-10,64;UBERON:0001015,1.88e-10,64;UBERON:0000383,1.88e-10,64;UBERON:0003102,6.50e-10,99;UBERON:0002100,9.20e-10,199;UBERON:0002199,3.76e-09,46;UBERON:0002416,3.76e-09,46;UBERON:0003104,6.48e-09,160;UBERON:0009142,6.48e-09,160;UBERON:0002097,2.75e-08,41;UBERON:0000490,1.03e-07,148 | |||
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| ||
|short_description=p3@TFE3 | |||
}} | }} |
Latest revision as of 20:50, 15 September 2015
Short description: | p3@TFE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFE3_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_ENST00000493583_5end |
EntrezGene: | TFE3 |
HGNC: | 11752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.54e-16 | 76 |
embryonic cell | 2.99e-14 | 250 |
muscle precursor cell | 2.07e-13 | 58 |
myoblast | 2.07e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-13 | 58 |
mesodermal cell | 2.53e-13 | 121 |
somatic stem cell | 2.16e-12 | 433 |
muscle cell | 5.05e-12 | 55 |
stem cell | 6.27e-12 | 441 |
multi fate stem cell | 1.35e-11 | 427 |
smooth muscle cell | 2.80e-10 | 43 |
smooth muscle myoblast | 2.80e-10 | 43 |
electrically responsive cell | 7.78e-10 | 61 |
electrically active cell | 7.78e-10 | 61 |
vascular associated smooth muscle cell | 5.07e-08 | 32 |
skin fibroblast | 2.56e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.03e-15 | 78 |
multilaminar epithelium | 1.96e-14 | 83 |
somite | 6.25e-14 | 71 |
presomitic mesoderm | 6.25e-14 | 71 |
presumptive segmental plate | 6.25e-14 | 71 |
dermomyotome | 6.25e-14 | 71 |
trunk paraxial mesoderm | 6.25e-14 | 71 |
paraxial mesoderm | 1.95e-13 | 72 |
presumptive paraxial mesoderm | 1.95e-13 | 72 |
dense mesenchyme tissue | 2.20e-13 | 73 |
trunk mesenchyme | 3.14e-12 | 122 |
musculoskeletal system | 7.30e-12 | 167 |
skeletal muscle tissue | 2.34e-11 | 62 |
striated muscle tissue | 2.34e-11 | 62 |
myotome | 2.34e-11 | 62 |
mesoderm | 1.06e-10 | 315 |
mesoderm-derived structure | 1.06e-10 | 315 |
presumptive mesoderm | 1.06e-10 | 315 |
muscle tissue | 1.88e-10 | 64 |
musculature | 1.88e-10 | 64 |
musculature of body | 1.88e-10 | 64 |
surface structure | 6.50e-10 | 99 |
trunk | 9.20e-10 | 199 |
integument | 3.76e-09 | 46 |
integumental system | 3.76e-09 | 46 |
mesenchyme | 6.48e-09 | 160 |
entire embryonic mesenchyme | 6.48e-09 | 160 |
skin of body | 2.75e-08 | 41 |
unilaminar epithelium | 1.03e-07 | 148 |