FFCP PHASE1:Hg19::chrX:85403445..85403479,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:85403445..85403479,+ to FFCP PHASE1:Hg19::chrX:85403445..85403479,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117154 | |EntrezGene=117154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16814 | |HGNC=16814 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFG7,A8K3I1,Q96NX9 | |UniProt=D6RFG7,A8K3I1,Q96NX9 | ||
|association_with_transcript=0bp_to_ENST00000344497,ENST00000373131,ENST00000461604,NM_001139514,NM_053281,uc004eew.2,uc004eex.2,uc010nmq.2_5end | |||
|cluster_id=chrX:85403445..85403479,+ | |||
|description=CAGE_peak_2_at_DACH2_5end | |||
|id=chrX:85403445..85403479,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;9.88e-10;4!CL:0000731;9.88e-10;4!CL:0002623;7.85e-08;3!CL:0002564;5.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.16e-09,4;CL:0000731,1.16e-09,4;CL:0002623,7.36e-08,3;CL:0002564,9.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.42e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.40e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.74e-23!57;UBERON:0005068!9.74e-23!57;UBERON:0006241!9.74e-23!57;UBERON:0007135!9.74e-23!57;UBERON:0005743!1.46e-21!86;UBERON:0007023!1.72e-21!115;UBERON:0004121!2.15e-21!169;UBERON:0000073!7.70e-21!94;UBERON:0001016!7.70e-21!94;UBERON:0001017!1.71e-20!82;UBERON:0000924!3.22e-20!173;UBERON:0006601!3.22e-20!173;UBERON:0003075!3.42e-20!86;UBERON:0007284!3.42e-20!86;UBERON:0002780!4.39e-20!41;UBERON:0001890!4.39e-20!41;UBERON:0006240!4.39e-20!41;UBERON:0003080!2.65e-19!42;UBERON:0002616!7.24e-19!59;UBERON:0002346!2.02e-18!90;UBERON:0000153!9.43e-18!129;UBERON:0007811!9.43e-18!129;UBERON:0003056!2.50e-17!61;UBERON:0000033!2.64e-17!123;UBERON:0002020!1.34e-16!34;UBERON:0003528!1.34e-16!34;UBERON:0001893!2.13e-16!34;UBERON:0002791!6.63e-16!33;UBERON:0000955!1.67e-15!69;UBERON:0006238!1.67e-15!69;UBERON:0001869!2.60e-15!32;UBERON:0002619!5.19e-13!22;UBERON:0000956!9.03e-13!25;UBERON:0000203!9.03e-13!25;UBERON:0001950!1.65e-11!20;UBERON:0000922!7.46e-09!612;UBERON:0000475!3.98e-08!365;UBERON:0000481!4.43e-08!347;UBERON:0001871!7.94e-07!7;UBERON:0000468!8.75e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.24e-10;5!UBERON:0002216;1.24e-10;5!UBERON:0011134;1.24e-10;5!UBERON:0002209;1.24e-10;5!UBERON:0002213;1.24e-10;5!UBERON:0007844;1.24e-10;5!UBERON:0011138;1.24e-10;5!UBERON:0001130;1.24e-10;5!UBERON:0001066;1.24e-10;5!UBERON:0001468;1.24e-10;5!UBERON:0003296;5.54e-10;4!UBERON:0010133;5.54e-10;4!UBERON:0004905;1.67e-09;8!UBERON:0000982;1.67e-09;8!UBERON:0004770;1.67e-09;8!UBERON:0000365;9.16e-08;5!UBERON:0002780;4.84e-07;41!UBERON:0001890;4.84e-07;41!UBERON:0002242;5.87e-07;3!UBERON:0000922;9.87e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.48e-10,5;UBERON:0002216,1.48e-10,5;UBERON:0011134,1.48e-10,5;UBERON:0002209,1.48e-10,5;UBERON:0002213,1.48e-10,5;UBERON:0005856,1.48e-10,5;UBERON:0005866,1.48e-10,5;UBERON:0005863,1.48e-10,5;UBERON:0007844,1.48e-10,5;UBERON:0011138,1.48e-10,5;UBERON:0001130,1.48e-10,5;UBERON:0001066,1.48e-10,5;UBERON:0001468,1.48e-10,5;UBERON:0003296,6.62e-10,4;UBERON:0010133,6.62e-10,4;UBERON:0004905,1.91e-09,8;UBERON:0000982,1.91e-09,8;UBERON:0004770,1.91e-09,8;UBERON:0011216,5.09e-09,223;UBERON:0000365,1.04e-07,5;UBERON:0001017,4.91e-07,81;UBERON:0002780,5.66e-07,41;UBERON:0001890,5.66e-07,41;UBERON:0003080,5.66e-07,41;UBERON:0006240,5.66e-07,41;UBERON:0001049,6.73e-07,56;UBERON:0005068,6.73e-07,56;UBERON:0006241,6.73e-07,56;UBERON:0007135,6.73e-07,56;UBERON:0002242,9.18e-07,3;UBERON:0003068,9.18e-07,3;UBERON:0002328,9.18e-07,3;UBERON:0004880,9.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.73272894144065,3.64537113300707,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,1.77901850772711,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0.625592599359821,0.831192346452549,0,0,0,0,0,0,0,0,0,1.03056216018252,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.06023814657188,0.813357600086629,3.42081481550722,0.756962552626885,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0.927443239800615,1.6437217193015,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,2.15662369942424,1.14861935834114,0,3.18518874668674,0.410952645100767,0,0,0,0,0.128343036279748,0,2.60279707715243,0.773288812777695,0.167516265334349,0,0,0,0,1.34960640891054,3.00102312635806,1.08506009479894,0,0,0,0,0,0,0,1.99267679560631,1.47495334833363,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.661139661443912,0.960950336825531,9.44334072459923,2.023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,2.15252686335615,6.73885902670502,2.21715076768338,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,33.9809460898638,0,0,0,0,0,0.994147647766298,1.82870241333667,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,23.0978060071781,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0.442317039724898,0,0.658156191461918,0,0,2.84715956464049,0,0.46112780877612,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3341524652992,0,0.176915129006678,0,0,0,0,1.21322039365219,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,1.20990716048664,5.20323694771833,0.189559738885464,0.60129367765797,0,0,0,0,0,0.284609546029793,0,0,0,0,2.97035336011451,0,0,0,0,0,0.264768380074501,3.38971111170799,0,0,0.886351143382302,0,0,0.213452994739353,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.0674035438541849,0,0,2.38568906942791,1.0896272488926,1.60753148465019,1.92555211236127,2.49264202817511,0,0.77380195455795,0.607495566580247,0,1.49730843868477,26.594476184444,0,0,0,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,2.45637617086946,0.66116300871345,0,0,0.533937062838473,10.375484136578,0.414239055347196,0,0,0,0,0,0,0,0,6.75332613876007,0,0.854183854313742,0.625954653532499,0.573409195690071,0.554645257684261,1.42821726765182,2.62862406378839,0,0.151649117541648,0,0,62.7568773781221,106.951719114789,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,2.02714286418868,0,0,0.184105950251841,0.139879507719444,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0,0,0,0,0,0,0,0,0.321146125482298,4.25089728976755,0.957803154342908,0.615349092722265,1.76450187355203,0.0691572524642179,1.13032951942296,1.42769420259154,0,0,0,0,0.381382095467167,3.4517996303005,0,0.902523940191087,0,0,0.261906694481422,0,0,0.472763092328763,0,0.826747186004736,0.634158101939068,7.11067251723685,0,1.98484471355718,0,0,5.89272019466115,3.02655349996942,3.03482802118316,4.09791944432336,0.0887023701626388,9.56442096712968,0,0.339848664884159,0.131545547125698,0,0.111231401892069,0.549451649953598,0.628462359664008,0,3.65263488203798,0,0,4.21711610642272,0,0,0,0,1.45051314914126,17.2425661864889,20.0465301926087,1.29068207646083,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0.205325613712494,1.1598144313382,1.94284397223656,0,0,5.35140408499059,7.45444141457136,70.9116333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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.73272894144065,3.64537113300707,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,1.77901850772711,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0.625592599359821,0.831192346452549,0,0,0,0,0,0,0,0,0,1.03056216018252,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.06023814657188,0.813357600086629,3.42081481550722,0.756962552626885,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0.927443239800615,1.6437217193015,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,2.15662369942424,1.14861935834114,0,3.18518874668674,0.410952645100767,0,0,0,0,0.128343036279748,0,2.60279707715243,0.773288812777695,0.167516265334349,0,0,0,0,1.34960640891054,3.00102312635806,1.08506009479894,0,0,0,0,0,0,0,1.99267679560631,1.47495334833363,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.661139661443912,0.960950336825531,9.44334072459923,2.023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,2.15252686335615,6.73885902670502,2.21715076768338,4.59446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,33.9809460898638,0,0,0,0,0,0.994147647766298,1.82870241333667,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,0,0,0,23.0978060071781,0,0.173624994933292,0.885741385813839,1.32656082487949,0,0.442317039724898,0,0.658156191461918,0,0,2.84715956464049,0,0.46112780877612,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3341524652992,0,0.176915129006678,0,0,0,0,1.21322039365219,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,1.20990716048664,5.20323694771833,0.189559738885464,0.60129367765797,0,0,0,0,0,0.284609546029793,0,0,0,0,2.97035336011451,0,0,0,0,0,0.264768380074501,3.38971111170799,0,0,0.886351143382302,0,0,0.213452994739353,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.0674035438541849,0,0,2.38568906942791,1.0896272488926,1.60753148465019,1.92555211236127,2.49264202817511,0,0.77380195455795,0.607495566580247,0,1.49730843868477,26.594476184444,0,0,0,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,2.45637617086946,0.66116300871345,0,0,0.533937062838473,10.375484136578,0.414239055347196,0,0,0,0,0,0,0,0,6.75332613876007,0,0.854183854313742,0.625954653532499,0.573409195690071,0.554645257684261,1.42821726765182,2.62862406378839,0,0.151649117541648,0,0,62.7568773781221,106.951719114789,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0,0,0,2.02714286418868,0,0,0.184105950251841,0.139879507719444,0,0,0.107824811396682,0.157265941855896,0.218419276384028,0,0,0,0,0,0,0,0,0,0.321146125482298,4.25089728976755,0.957803154342908,0.615349092722265,1.76450187355203,0.0691572524642179,1.13032951942296,1.42769420259154,0,0,0,0,0.381382095467167,3.4517996303005,0,0.902523940191087,0,0,0.261906694481422,0,0,0.472763092328763,0,0.826747186004736,0.634158101939068,7.11067251723685,0,1.98484471355718,0,0,5.89272019466115,3.02655349996942,3.03482802118316,4.09791944432336,0.0887023701626388,9.56442096712968,0,0.339848664884159,0.131545547125698,0,0.111231401892069,0.549451649953598,0.628462359664008,0,3.65263488203798,0,0,4.21711610642272,0,0,0,0,1.45051314914126,17.2425661864889,20.0465301926087,1.29068207646083,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0.205325613712494,1.1598144313382,1.94284397223656,0,0,5.35140408499059,7.45444141457136,70.9116333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| ||
|short_description=p2@DACH2 | |||
}} | }} |
Latest revision as of 13:41, 16 September 2015
Short description: | p2@DACH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DACH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344497, ENST00000373131, ENST00000461604, NM_001139514, NM_053281, uc004eew.2, uc004eex.2, uc010nmq.2_5end |
EntrezGene: | DACH2 |
HGNC: | 16814 |
UniProt: | D6RFG7A8K3I1Q96NX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.16e-09 | 4 |
urothelial cell | 1.16e-09 | 4 |
acinar cell of salivary gland | 7.36e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 9.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.48e-10 | 5 |
symphysis | 1.48e-10 | 5 |
nonsynovial joint | 1.48e-10 | 5 |
fibrous joint | 1.48e-10 | 5 |
cartilaginous joint | 1.48e-10 | 5 |
developing mesenchymal condensation | 1.48e-10 | 5 |
pre-cartilage condensation | 1.48e-10 | 5 |
cartilaginous condensation | 1.48e-10 | 5 |
cartilage element | 1.48e-10 | 5 |
post-cranial axial skeletal system | 1.48e-10 | 5 |
vertebral column | 1.48e-10 | 5 |
intervertebral disk | 1.48e-10 | 5 |
intervertebral joint | 1.48e-10 | 5 |
gland of diencephalon | 6.62e-10 | 4 |
neuroendocrine gland | 6.62e-10 | 4 |
articulation | 1.91e-09 | 8 |
skeletal joint | 1.91e-09 | 8 |
articular system | 1.91e-09 | 8 |
organ system subdivision | 5.09e-09 | 223 |
urothelium | 1.04e-07 | 5 |
central nervous system | 4.91e-07 | 81 |
regional part of forebrain | 5.66e-07 | 41 |
forebrain | 5.66e-07 | 41 |
anterior neural tube | 5.66e-07 | 41 |
future forebrain | 5.66e-07 | 41 |
neural tube | 6.73e-07 | 56 |
neural rod | 6.73e-07 | 56 |
future spinal cord | 6.73e-07 | 56 |
neural keel | 6.73e-07 | 56 |
nucleus pulposus | 9.18e-07 | 3 |
axial mesoderm | 9.18e-07 | 3 |
notochord | 9.18e-07 | 3 |
chordamesoderm | 9.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.40e-10 | 4 |