FFCP PHASE1:Mm9::chr15:63829598..63829609,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:63829598..63829609,- to FFCP PHASE1:Mm9::chr15:63829598..63829609,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=223601 | |EntrezGene=223601 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q921M7 | |UniProt=Q921M7 | ||
|association_with_transcript=-74bp_to_ENSMUST00000164532,uc007vze.2_5end | |||
|cluster_id=chr15:63829598..63829609,- | |||
|description=CAGE_peak_5_at_Fam49b_5end | |||
|id=chr15:63829598..63829609,- | |||
|ontology_enrichment_celltype=CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000117!1.04e-09!23;CL:0000337!1.04e-09!23;CL:0000221!7.89e-09!44;CL:0000133!7.89e-09!44;CL:0002319!1.04e-08!43;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.56e-11,33;CL:0000047,7.56e-11,33;CL:0000031,7.56e-11,33;CL:0000404,7.56e-11,33;CL:0000117,1.32e-09,23;CL:0000337,1.32e-09,23;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.21e-08,43;CL:0000393,7.49e-07,39;CL:0000211,7.49e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.43e-14!75;UBERON:0001016!1.43e-14!75;UBERON:0001017!6.62e-14!73;UBERON:0005743!6.62e-14!73;UBERON:0007811!1.35e-12!86;UBERON:0000153!7.30e-12!94;UBERON:0000033!1.68e-10!63;UBERON:0002346!5.29e-10!71;UBERON:0003075!5.29e-10!71;UBERON:0007284!5.29e-10!71;UBERON:0004121!6.61e-10!102;UBERON:0000924!6.61e-10!102;UBERON:0006601!6.61e-10!102;UBERON:0001049!6.90e-10!52;UBERON:0005068!6.90e-10!52;UBERON:0006241!6.90e-10!52;UBERON:0007135!6.90e-10!52;UBERON:0002020!8.13e-10!34;UBERON:0003056!2.04e-09!49;UBERON:0000955!6.33e-09!50;UBERON:0006238!6.33e-09!50;UBERON:0002616!1.36e-08!49;UBERON:0003080!3.18e-07!40;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29;UBERON:0002780!6.95e-07!39;UBERON:0001890!6.95e-07!39;UBERON:0006240!6.95e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-14,75;UBERON:0001017,7.46e-14,73;UBERON:0002346,3.09e-13,64;UBERON:0003075,3.09e-13,64;UBERON:0007284,3.09e-13,64;UBERON:0004121,1.51e-12,95;UBERON:0000924,1.51e-12,95;UBERON:0006601,1.51e-12,95;UBERON:0000073,3.31e-11,54;UBERON:0010371,6.98e-10,73;UBERON:0001049,7.96e-10,52;UBERON:0005068,7.96e-10,52;UBERON:0006241,7.96e-10,52;UBERON:0007135,7.96e-10,52;UBERON:0002020,9.78e-10,34;UBERON:0003056,2.54e-09,49;UBERON:0000955,1.78e-07,47;UBERON:0006238,1.78e-07,47;UBERON:0002616,3.67e-07,46;UBERON:0003080,3.69e-07,40;UBERON:0003528,6.18e-07,29;UBERON:0002791,6.18e-07,29;UBERON:0001893,6.18e-07,29;UBERON:0002780,8.08e-07,39;UBERON:0001890,8.08e-07,39;UBERON:0006240,8.08e-07,39 | |||
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| ||
|short_description=p5@Fam49b | |||
}} | }} |
Latest revision as of 21:25, 26 September 2015
Short description: | p5@Fam49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam49b_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENSMUST00000164532, uc007vze.2_5end |
EntrezGene: | Fam49b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.56e-11 | 33 |
neuronal stem cell | 7.56e-11 | 33 |
neuroblast | 7.56e-11 | 33 |
electrically signaling cell | 7.56e-11 | 33 |
CNS neuron (sensu Vertebrata) | 1.32e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-09 | 23 |
ectodermal cell | 9.18e-09 | 44 |
neurectodermal cell | 9.18e-09 | 44 |
neural cell | 1.21e-08 | 43 |
electrically responsive cell | 7.49e-07 | 39 |
electrically active cell | 7.49e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-14 | 75 |
central nervous system | 7.46e-14 | 73 |
neurectoderm | 3.09e-13 | 64 |
neural plate | 3.09e-13 | 64 |
presumptive neural plate | 3.09e-13 | 64 |
ectoderm-derived structure | 1.51e-12 | 95 |
ectoderm | 1.51e-12 | 95 |
presumptive ectoderm | 1.51e-12 | 95 |
regional part of nervous system | 3.31e-11 | 54 |
ecto-epithelium | 6.98e-10 | 73 |
neural tube | 7.96e-10 | 52 |
neural rod | 7.96e-10 | 52 |
future spinal cord | 7.96e-10 | 52 |
neural keel | 7.96e-10 | 52 |
gray matter | 9.78e-10 | 34 |
pre-chordal neural plate | 2.54e-09 | 49 |
brain | 1.78e-07 | 47 |
future brain | 1.78e-07 | 47 |
regional part of brain | 3.67e-07 | 46 |
anterior neural tube | 3.69e-07 | 40 |
brain grey matter | 6.18e-07 | 29 |
regional part of telencephalon | 6.18e-07 | 29 |
telencephalon | 6.18e-07 | 29 |
regional part of forebrain | 8.08e-07 | 39 |
forebrain | 8.08e-07 | 39 |
future forebrain | 8.08e-07 | 39 |