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FFCP PHASE1:Mm9::chr15:77137497..77137533,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:77137497..77137533,-
|DHSsupport=NA
|short_description=p8@Rbfox2
|DPIdataset=NA
|description=CAGE_peak_8_at_Rbfox2_5end
|association_with_transcript=-14bp_to_ENSMUST00000048145,ENSMUST00000171751,NM_001110827,NM_053104,NM_175387,uc007wng.2,uc007wnh.2,uc007wni.2_5end
|EntrezGene=93686
|EntrezGene=93686
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8BP71
|UniProt=Q8BP71
|association_with_transcript=-14bp_to_ENSMUST00000048145,ENSMUST00000171751,NM_001110827,NM_053104,NM_175387,uc007wng.2,uc007wnh.2,uc007wni.2_5end
|cluster_id=chr15:77137497..77137533,-
|description=CAGE_peak_8_at_Rbfox2_5end
|id=chr15:77137497..77137533,-
|ontology_enrichment_celltype=CL:0000540!1.26e-15!33;CL:0000047!1.26e-15!33;CL:0000031!1.26e-15!33;CL:0000404!1.26e-15!33;CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000393!7.23e-11!39;CL:0000211!7.23e-11!39;CL:0000221!2.47e-09!44;CL:0000133!2.47e-09!44;CL:0002319!2.53e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000540,4.28e-18,33;CL:0000047,4.28e-18,33;CL:0000031,4.28e-18,33;CL:0000404,4.28e-18,33;CL:0000117,3.45e-15,23;CL:0000337,3.45e-15,23;CL:0000393,6.58e-13,39;CL:0000211,6.58e-13,39;CL:0000221,6.91e-11,44;CL:0000133,6.91e-11,44;CL:0002319,7.10e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.38e-18!73;UBERON:0005743!4.38e-18!73;UBERON:0000073!5.66e-17!75;UBERON:0001016!5.66e-17!75;UBERON:0004121!4.50e-16!102;UBERON:0000924!4.50e-16!102;UBERON:0006601!4.50e-16!102;UBERON:0002346!5.56e-15!71;UBERON:0003075!5.56e-15!71;UBERON:0007284!5.56e-15!71;UBERON:0003056!3.84e-14!49;UBERON:0000033!1.23e-13!63;UBERON:0001049!4.05e-13!52;UBERON:0005068!4.05e-13!52;UBERON:0006241!4.05e-13!52;UBERON:0007135!4.05e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002020!1.70e-12!34;UBERON:0003080!3.57e-12!40;UBERON:0002616!4.36e-12!49;UBERON:0002780!4.48e-12!39;UBERON:0001890!4.48e-12!39;UBERON:0006240!4.48e-12!39;UBERON:0002791!6.00e-10!29;UBERON:0003528!6.00e-10!29;UBERON:0001893!6.00e-10!29;UBERON:0000468!3.00e-08!333;UBERON:0000922!4.03e-07!328;UBERON:0000956!6.26e-07!21;UBERON:0001869!6.26e-07!21;UBERON:0000203!6.26e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.54e-20,73;UBERON:0001016,1.13e-18,75;UBERON:0002346,8.89e-18,64;UBERON:0003075,8.89e-18,64;UBERON:0007284,8.89e-18,64;UBERON:0004121,3.43e-17,95;UBERON:0000924,3.43e-17,95;UBERON:0006601,3.43e-17,95;UBERON:0000073,4.10e-16,54;UBERON:0003056,7.98e-16,49;UBERON:0010371,1.74e-14,73;UBERON:0010314,2.63e-14,92;UBERON:0001049,4.80e-14,52;UBERON:0005068,4.80e-14,52;UBERON:0006241,4.80e-14,52;UBERON:0007135,4.80e-14,52;UBERON:0002020,6.22e-14,34;UBERON:0003080,1.36e-13,40;UBERON:0002780,1.79e-13,39;UBERON:0001890,1.79e-13,39;UBERON:0006240,1.79e-13,39;UBERON:0000955,2.13e-12,47;UBERON:0006238,2.13e-12,47;UBERON:0002616,7.72e-12,46;UBERON:0003528,5.76e-11,29;UBERON:0002791,5.76e-11,29;UBERON:0001893,5.76e-11,29;UBERON:0000956,1.88e-07,21;UBERON:0001869,1.88e-07,21;UBERON:0000203,1.88e-07,21;UBERON:0000922,3.83e-07,320
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,1.00727563147134,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0.639969691173627,0.45881856213434,0,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,9.1042407386819,7.93486468908049,8.23980824558033,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,5.49554945234932,6.88530285491622,6.94072372459561,3.71346279724945,1.98781686856452,6.49201235839256,8.14686503655009,8.27296907949019,4.40463523997555,2.042997409363,2.61131106535614,8.96826756565318,8.96578907303615,7.8137005583514,1.67509799400829,1.68828783009504,2.13917546887534,5.59794312399969,3.98640706237488,9.13357284543973,0.302904773332736,0.226714680320357,2.02905142091174,0,0,0,0,0,0.421333260395256,0.511290967734173,0,0.35333957451034,1.26759077799012,0,0,0,0.432982082022428,0,0,0.5709193985953,0.517875767294343,0.890652834388949,1.04091196059682,0.608930956624282,0.230615497256059,1.20578112442098,1.52865319276416,0.502666365318702,1.23597483867187,0.578397427679647,0.884610551949874,0.808834249737046,0.662524555381181,1.45462575940567,0,2.04946557908083,1.04723353406728,0.510914110417183,0,0.599902730993408,0,1.64769703345305,1.83000241127451,8.92145900001337,1.21677024134594,1.79000820131231,1.24672826735736,1.78465389374533,0.611036183101898,0.373220911830279,0.252722758433675,0.420883711772948,2.47228841629137,2.06911893990126,1.98068342785884,3.16480117455002,3.06164246180975,3.58718416797579,2.24884138943349,1.03481348295606,2.58681591519411,2.45837904218165,2.28736461413134,0.657587197282725,3.33656699070717,1.0447564995665,0.411564272815887,2.18937693500343,0,0,0,1.65700618028402,0.938104239924385,2.88099298337624,2.60419209143731,2.75469924446365,1.23413690309903,1.86027155800326,1.87791380979733,0.467061369468678,1.97471819896177,1.80584210487005,0.972825714550269,0.584799949701329,1.09775057645525,1.20785776884335,2.10289948564127,5.65975368086064,0.330418782983798,0.264450566663544,2.55945900642281,2.78684006232526,2.06187938115349,2.62188582010345,0.667134131534611,2.09248188723815,0,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0.648414149624083,0.796565093017469,0.948339504765408,1.82797620175566,3.38123207019241,2.03651327845314,0.969762435838129,1.33258057791605,1.39120381673366,0.590440591918409,0.941992367048249,0.246794327843601,0,2.16898637430922,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,1.89491411770485,1.62964976442026,0.678980343100753,1.64283173801951,1.84256883185997,0.714130922658041,1.17080188714679,1.41871629695572,1.10732344824387,1.43509291791738,2.29408640602033,0.518054945597687,1.44649058581512,0,0,0.491764273019036,0.551873492609465,0.642202359951168,1.40654023910644,0.163934945376675,1.26235463602186,1.89304931649754,3.51394869866975,2.80050417052639,1.43381278771531,2.45078541490634,1.98153571552183,2.02405350837447,3.50707029493574,2.76701444562566,3.53453448063988,0.567760340833074,1.24645922567079,0.977321756121456,0.824850614862677,0,1.94224508923985,0.906970670894253,0.754420319023592,0.885905678642318,1.22974059177571,0.516856586336442,0.727067458955011,0,0,0,1.03135543248187,1.70219802876894,3.06103859853227,2.8458910432206,1.92903331528433,2.48276327099183,1.42695054081656,2.96188237083818,1.522324745573,0.469343416127421,0.42366414172764,0.441056796109924,0.32977250588296,0.968786560175433,0.784068024066026,1.3130957840345,0.984845398470368,1.1659233465194,0.741701208042039,0,0.619160603889667,1.48155621895769,0,0.136694227721025,0,0.509935289981566,0.279902904647316,0,0,1.89801596148681,1.62655573701479,0.972048067396211,1.46361807210128,1.09181281873089,0.134864346384821,0.495920734352016,0,0.129614973291793,0,2.81846469342095,1.94371509857172,1.15820943319968,2.72231663681667,2.58319646955462,3.04121025883401,2.93393096614385,1.5624526181274,3.67007705489988,5.31485065817213,3.74439008135225,0,1.21635129174099,0.718976700153791,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.503653849092235,0.386379188064381,0.375364950902364,0.549454872801795,0.857473516316263,0.501572104035363,3.3885110557024,4.14292712856459,2.86447756719698,3.78077001156113,4.11049511862385,2.2661816921691,5.40018000185445,0.900642406448441,0.453142408984205,2.5888015587591,4.04770655578289,2.39414924040619,2.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|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,1.00727563147134,1.16806320297763,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0.639969691173627,0.45881856213434,0,0.86152399231815,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.577703239502549,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.771778308107841,0.286533439938757,0,9.1042407386819,7.93486468908049,8.23980824558033,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,5.49554945234932,6.88530285491622,6.94072372459561,3.71346279724945,1.98781686856452,6.49201235839256,8.14686503655009,8.27296907949019,4.40463523997555,2.042997409363,2.61131106535614,8.96826756565318,8.96578907303615,7.8137005583514,1.67509799400829,1.68828783009504,2.13917546887534,5.59794312399969,3.98640706237488,9.13357284543973,0.302904773332736,0.226714680320357,2.02905142091174,0,0,0,0,0,0.421333260395256,0.511290967734173,0,0.35333957451034,1.26759077799012,0,0,0,0.432982082022428,0,0,0.5709193985953,0.517875767294343,0.890652834388949,1.04091196059682,0.608930956624282,0.230615497256059,1.20578112442098,1.52865319276416,0.502666365318702,1.23597483867187,0.578397427679647,0.884610551949874,0.808834249737046,0.662524555381181,1.45462575940567,0,2.04946557908083,1.04723353406728,0.510914110417183,0,0.599902730993408,0,1.64769703345305,1.83000241127451,8.92145900001337,1.21677024134594,1.79000820131231,1.24672826735736,1.78465389374533,0.611036183101898,0.373220911830279,0.252722758433675,0.420883711772948,2.47228841629137,2.06911893990126,1.98068342785884,3.16480117455002,3.06164246180975,3.58718416797579,2.24884138943349,1.03481348295606,2.58681591519411,2.45837904218165,2.28736461413134,0.657587197282725,3.33656699070717,1.0447564995665,0.411564272815887,2.18937693500343,0,0,0,1.65700618028402,0.938104239924385,2.88099298337624,2.60419209143731,2.75469924446365,1.23413690309903,1.86027155800326,1.87791380979733,0.467061369468678,1.97471819896177,1.80584210487005,0.972825714550269,0.584799949701329,1.09775057645525,1.20785776884335,2.10289948564127,5.65975368086064,0.330418782983798,0.264450566663544,2.55945900642281,2.78684006232526,2.06187938115349,2.62188582010345,0.667134131534611,2.09248188723815,0,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0,0.648414149624083,0.796565093017469,0.948339504765408,1.82797620175566,3.38123207019241,2.03651327845314,0.969762435838129,1.33258057791605,1.39120381673366,0.590440591918409,0.941992367048249,0.246794327843601,0,2.16898637430922,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,1.89491411770485,1.62964976442026,0.678980343100753,1.64283173801951,1.84256883185997,0.714130922658041,1.17080188714679,1.41871629695572,1.10732344824387,1.43509291791738,2.29408640602033,0.518054945597687,1.44649058581512,0,0,0.491764273019036,0.551873492609465,0.642202359951168,1.40654023910644,0.163934945376675,1.26235463602186,1.89304931649754,3.51394869866975,2.80050417052639,1.43381278771531,2.45078541490634,1.98153571552183,2.02405350837447,3.50707029493574,2.76701444562566,3.53453448063988,0.567760340833074,1.24645922567079,0.977321756121456,0.824850614862677,0,1.94224508923985,0.906970670894253,0.754420319023592,0.885905678642318,1.22974059177571,0.516856586336442,0.727067458955011,0,0,0,1.03135543248187,1.70219802876894,3.06103859853227,2.8458910432206,1.92903331528433,2.48276327099183,1.42695054081656,2.96188237083818,1.522324745573,0.469343416127421,0.42366414172764,0.441056796109924,0.32977250588296,0.968786560175433,0.784068024066026,1.3130957840345,0.984845398470368,1.1659233465194,0.741701208042039,0,0.619160603889667,1.48155621895769,0,0.136694227721025,0,0.509935289981566,0.279902904647316,0,0,1.89801596148681,1.62655573701479,0.972048067396211,1.46361807210128,1.09181281873089,0.134864346384821,0.495920734352016,0,0.129614973291793,0,2.81846469342095,1.94371509857172,1.15820943319968,2.72231663681667,2.58319646955462,3.04121025883401,2.93393096614385,1.5624526181274,3.67007705489988,5.31485065817213,3.74439008135225,0,1.21635129174099,0.718976700153791,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.503653849092235,0.386379188064381,0.375364950902364,0.549454872801795,0.857473516316263,0.501572104035363,3.3885110557024,4.14292712856459,2.86447756719698,3.78077001156113,4.11049511862385,2.2661816921691,5.40018000185445,0.900642406448441,0.453142408984205,2.5888015587591,4.04770655578289,2.39414924040619,2.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|short_description=p8@Rbfox2
}}
}}

Latest revision as of 01:25, 27 September 2015

Short description:p8@Rbfox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Rbfox2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -14bp_to_ENSMUST00000048145, ENSMUST00000171751, NM_001110827, NM_053104, NM_175387, uc007wng.2, uc007wnh.2, uc007wni.2_5end
EntrezGene:Rbfox2
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p8@Rbfox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.28e-1833
neuronal stem cell4.28e-1833
neuroblast4.28e-1833
electrically signaling cell4.28e-1833
CNS neuron (sensu Vertebrata)3.45e-1523
neuroblast (sensu Vertebrata)3.45e-1523
electrically responsive cell6.58e-1339
electrically active cell6.58e-1339
ectodermal cell6.91e-1144
neurectodermal cell6.91e-1144
neural cell7.10e-1143

Uber anatomy
Ontology termp-valuen
central nervous system6.54e-2073
nervous system1.13e-1875
neurectoderm8.89e-1864
neural plate8.89e-1864
presumptive neural plate8.89e-1864
ectoderm-derived structure3.43e-1795
ectoderm3.43e-1795
presumptive ectoderm3.43e-1795
regional part of nervous system4.10e-1654
pre-chordal neural plate7.98e-1649
ecto-epithelium1.74e-1473
structure with developmental contribution from neural crest2.63e-1492
neural tube4.80e-1452
neural rod4.80e-1452
future spinal cord4.80e-1452
neural keel4.80e-1452
gray matter6.22e-1434
anterior neural tube1.36e-1340
regional part of forebrain1.79e-1339
forebrain1.79e-1339
future forebrain1.79e-1339
brain2.13e-1247
future brain2.13e-1247
regional part of brain7.72e-1246
brain grey matter5.76e-1129
regional part of telencephalon5.76e-1129
telencephalon5.76e-1129
cerebral cortex1.88e-0721
cerebral hemisphere1.88e-0721
pallium1.88e-0721
embryo3.83e-07320
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