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FFCP PHASE1:Mm9::chr2:113057209..113057251,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:113057209..113057251,-
|DHSsupport=NA
|short_description=p1@Ryr3
|DPIdataset=NA
|description=CAGE_peak_1_at_Ryr3_5end
|association_with_transcript=0bp_to_ENSMUST00000134358,ENSMUST00000156757,uc008lpi.2,uc012cba.1_5end
|EntrezGene=20192
|EntrezGene=20192
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=Q14AQ9,B7ZMP2
|UniProt=Q14AQ9,B7ZMP2
|association_with_transcript=0bp_to_ENSMUST00000134358,ENSMUST00000156757,uc008lpi.2,uc012cba.1_5end
|cluster_id=chr2:113057209..113057251,-
|description=CAGE_peak_1_at_Ryr3_5end
|id=chr2:113057209..113057251,-
|ontology_enrichment_celltype=CL:0000117!7.42e-07!23;CL:0000337!7.42e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.04e-08,23;CL:0000337,4.04e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.22e-11!52;UBERON:0005068!2.22e-11!52;UBERON:0006241!2.22e-11!52;UBERON:0007135!2.22e-11!52;UBERON:0000955!3.21e-11!50;UBERON:0006238!3.21e-11!50;UBERON:0000033!4.45e-11!63;UBERON:0002020!6.16e-11!34;UBERON:0003056!1.03e-10!49;UBERON:0002616!1.21e-10!49;UBERON:0003080!1.09e-09!40;UBERON:0002791!1.51e-09!29;UBERON:0003528!1.51e-09!29;UBERON:0001893!1.51e-09!29;UBERON:0002780!3.68e-09!39;UBERON:0001890!3.68e-09!39;UBERON:0006240!3.68e-09!39;UBERON:0002346!4.29e-09!71;UBERON:0003075!4.29e-09!71;UBERON:0007284!4.29e-09!71;UBERON:0001017!1.81e-07!73;UBERON:0005743!1.81e-07!73;UBERON:0000468!3.10e-07!333;UBERON:0000956!5.40e-07!21;UBERON:0001869!5.40e-07!21;UBERON:0000203!5.40e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.50e-12,34;UBERON:0000073,4.48e-12,54;UBERON:0001049,3.02e-11,52;UBERON:0005068,3.02e-11,52;UBERON:0006241,3.02e-11,52;UBERON:0007135,3.02e-11,52;UBERON:0002346,6.03e-11,64;UBERON:0003075,6.03e-11,64;UBERON:0007284,6.03e-11,64;UBERON:0003528,1.29e-10,29;UBERON:0002791,1.29e-10,29;UBERON:0001893,1.29e-10,29;UBERON:0000955,7.23e-10,47;UBERON:0006238,7.23e-10,47;UBERON:0003056,1.25e-09,49;UBERON:0002616,3.12e-09,46;UBERON:0003080,1.05e-08,40;UBERON:0010371,1.17e-08,73;UBERON:0001017,2.24e-08,73;UBERON:0010314,3.69e-08,92;UBERON:0002780,4.02e-08,39;UBERON:0001890,4.02e-08,39;UBERON:0006240,4.02e-08,39;UBERON:0001016,9.00e-08,75;UBERON:0000956,1.69e-07,21;UBERON:0001869,1.69e-07,21;UBERON:0000203,1.69e-07,21;UBERON:0004121,4.21e-07,95;UBERON:0000924,4.21e-07,95;UBERON:0006601,4.21e-07,95
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0.335565212115473,0,0,0,0,0,2.63011399117477,3.70293685490423,5.70448263155561,0,0.889294796111139,0,0,0,0,0,4.56234294157302,5.53524347159932,3.78584930432488,1.71390590642282,3.09215957332259,1.71487118900936,1.24599112323707,2.75765635983006,3.30347642998166,6.89511625660014,5.68344173048101,2.90149833006426,3.65950574409639,3.12548022334056,1.67509799400829,7.31591393041184,7.79271063661732,7.95497180778903,6.40672563595963,3.16879057903011,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,11.3236794963186,0.220841518460394,0.484875253135222,1.86391761218122,4.68449275218475,2.51336048176146,0.255457055208591,0,0,0,8.53806644607489,64.0500843946077,5.6544458450789,7.30062144807561,9.2057564638919,13.5062228963714,22.5515355664183,0.101839363850316,0.622034853050465,1.26361379216837,2.10441855886474,1.04096354370163,0.689706313300419,1.62055916824814,1.65775299619287,2.38127747029647,3.71529788826064,2.43624483855295,4.65666067330228,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,2.089512999133,0.61734640922383,0.199034266818493,0,0,0,4.55676699578104,3.28336483973535,3.42117916775928,7.57583153872673,4.32881309844288,6.17068451549513,4.88321283975857,4.56064782379353,5.02090972178829,3.12663714835613,0.820837320395476,0.405344047729279,0.730999937126662,0.658650345873152,0.805238512562231,21.449574753541,8.43817821510132,0,0,0,0.928946687441754,2.06187938115349,1.21010114774006,2.66853652613844,2.85338439168839,0.949058123089023,0.823494773620054,3.01602250560323,4.37704238490532,3.50935356814416,5.39291645192533,1.51296634912286,1.39398891278057,0.189667900953082,0.799739588268102,0,0.203651327845314,0.775809948670503,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,1.51593129416388,2.28150967018836,1.52770577197669,1.17345124144251,3.51763140627813,2.85652369063216,0.585400943573396,1.57635144106191,0.8858587585951,0.478364305972461,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,7.54587772942622,6.09500770279457,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,9.63963949265421,4.40014264145633,0.178065603667255,0.162886959353576,13.6925202067204,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,1.42598951353889,0.948110273807448,0,0,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,0.532020700926821,1.07021290561242,0,0.304464949114599,0.23467170806371,0,2.20528398054962,0.32977250588296,2.58343082713449,1.02531972377865,0.119372344003136,0.984845398470368,2.04036585640896,4.82105785227325,0,2.47664241555867,0.740778109478847,0.376736914009382,0,0,0,0,0,0,0.790839983952838,5.48962561242491,5.94029374519907,7.94535524854981,8.95286511359328,9.57536859332227,8.84391976261094,4.18809507174447,2.72191443912765,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0.948033361884535,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0,0,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,7.72758376128762,9.57180624801028,8.79127796482872,3.64426244434412,3.00943262421218,7.90652579663893,8.28585425712918,6.30185064783336,4.64003592327956,6.16574267793578,1.5107877947794,6.07520250208625,7.65546045481175,3.17199686288943,6.21312374102184,0.207574695168353,0.798049746802062,1.36586884603307,5.59145449257076,0.838452650511929,2.20612210140017,9.55660929546946,5.97501665992793,11.8740107548972,6.57012750585873,9.88569269571935,6.41329560712659,6.46126401542189,6.97874161213075,5.80098236451694,6.19181798667996,6.60540657885676,6.36600427530227,4.53294490883637,8.83193520806384,9.60033906679163,7.0990322463735,7.86839426826159,8.57543858130738,5.74067220533517,7.61531471025089,7.68297486065645,7.62902163169744,6.92600980613895,7.85599180320834,7.94854621431967,6.40279135441163,6.13846564754534,7.2820315357404,4.82266527452853,5.24602213669686,7.01794825336225,4.72716318906256,7.46024495068489,4.85301122062934,3.2461496986859
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0.335565212115473,0,0,0,0,0,2.63011399117477,3.70293685490423,5.70448263155561,0,0.889294796111139,0,0,0,0,0,4.56234294157302,5.53524347159932,3.78584930432488,1.71390590642282,3.09215957332259,1.71487118900936,1.24599112323707,2.75765635983006,3.30347642998166,6.89511625660014,5.68344173048101,2.90149833006426,3.65950574409639,3.12548022334056,1.67509799400829,7.31591393041184,7.79271063661732,7.95497180778903,6.40672563595963,3.16879057903011,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,11.3236794963186,0.220841518460394,0.484875253135222,1.86391761218122,4.68449275218475,2.51336048176146,0.255457055208591,0,0,0,8.53806644607489,64.0500843946077,5.6544458450789,7.30062144807561,9.2057564638919,13.5062228963714,22.5515355664183,0.101839363850316,0.622034853050465,1.26361379216837,2.10441855886474,1.04096354370163,0.689706313300419,1.62055916824814,1.65775299619287,2.38127747029647,3.71529788826064,2.43624483855295,4.65666067330228,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,2.089512999133,0.61734640922383,0.199034266818493,0,0,0,4.55676699578104,3.28336483973535,3.42117916775928,7.57583153872673,4.32881309844288,6.17068451549513,4.88321283975857,4.56064782379353,5.02090972178829,3.12663714835613,0.820837320395476,0.405344047729279,0.730999937126662,0.658650345873152,0.805238512562231,21.449574753541,8.43817821510132,0,0,0,0.928946687441754,2.06187938115349,1.21010114774006,2.66853652613844,2.85338439168839,0.949058123089023,0.823494773620054,3.01602250560323,4.37704238490532,3.50935356814416,5.39291645192533,1.51296634912286,1.39398891278057,0.189667900953082,0.799739588268102,0,0.203651327845314,0.775809948670503,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,1.51593129416388,2.28150967018836,1.52770577197669,1.17345124144251,3.51763140627813,2.85652369063216,0.585400943573396,1.57635144106191,0.8858587585951,0.478364305972461,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.551873492609465,7.54587772942622,6.09500770279457,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,9.63963949265421,4.40014264145633,0.178065603667255,0.162886959353576,13.6925202067204,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0,0.516856586336442,0.727067458955011,1.42598951353889,0.948110273807448,0,0,0.340439605753788,0.900305470156551,0.388076051348264,0.857348140126369,0.532020700926821,1.07021290561242,0,0.304464949114599,0.23467170806371,0,2.20528398054962,0.32977250588296,2.58343082713449,1.02531972377865,0.119372344003136,0.984845398470368,2.04036585640896,4.82105785227325,0,2.47664241555867,0.740778109478847,0.376736914009382,0,0,0,0,0,0,0.790839983952838,5.48962561242491,5.94029374519907,7.94535524854981,8.95286511359328,9.57536859332227,8.84391976261094,4.18809507174447,2.72191443912765,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0.948033361884535,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0,0,0.0962118416403295,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,7.72758376128762,9.57180624801028,8.79127796482872,3.64426244434412,3.00943262421218,7.90652579663893,8.28585425712918,6.30185064783336,4.64003592327956,6.16574267793578,1.5107877947794,6.07520250208625,7.65546045481175,3.17199686288943,6.21312374102184,0.207574695168353,0.798049746802062,1.36586884603307,5.59145449257076,0.838452650511929,2.20612210140017,9.55660929546946,5.97501665992793,11.8740107548972,6.57012750585873,9.88569269571935,6.41329560712659,6.46126401542189,6.97874161213075,5.80098236451694,6.19181798667996,6.60540657885676,6.36600427530227,4.53294490883637,8.83193520806384,9.60033906679163,7.0990322463735,7.86839426826159,8.57543858130738,5.74067220533517,7.61531471025089,7.68297486065645,7.62902163169744,6.92600980613895,7.85599180320834,7.94854621431967,6.40279135441163,6.13846564754534,7.2820315357404,4.82266527452853,5.24602213669686,7.01794825336225,4.72716318906256,7.46024495068489,4.85301122062934,3.2461496986859
|short_description=p1@Ryr3
}}
}}

Latest revision as of 23:26, 1 October 2015

Short description:p1@Ryr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ryr3_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: 0bp_to_ENSMUST00000134358, ENSMUST00000156757, uc008lpi.2, uc012cba.1_5end
EntrezGene:Ryr3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ryr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D864.05
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B222.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D45.94
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B89.58
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.04e-0823
neuroblast (sensu Vertebrata)4.04e-0823

Uber anatomy
Ontology termp-valuen
gray matter2.50e-1234
regional part of nervous system4.48e-1254
neural tube3.02e-1152
neural rod3.02e-1152
future spinal cord3.02e-1152
neural keel3.02e-1152
neurectoderm6.03e-1164
neural plate6.03e-1164
presumptive neural plate6.03e-1164
brain grey matter1.29e-1029
regional part of telencephalon1.29e-1029
telencephalon1.29e-1029
brain7.23e-1047
future brain7.23e-1047
pre-chordal neural plate1.25e-0949
regional part of brain3.12e-0946
anterior neural tube1.05e-0840
ecto-epithelium1.17e-0873
central nervous system2.24e-0873
structure with developmental contribution from neural crest3.69e-0892
regional part of forebrain4.02e-0839
forebrain4.02e-0839
future forebrain4.02e-0839
nervous system9.00e-0875
cerebral cortex1.69e-0721
cerebral hemisphere1.69e-0721
pallium1.69e-0721
ectoderm-derived structure4.21e-0795
ectoderm4.21e-0795
presumptive ectoderm4.21e-0795
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