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FFCP PHASE1:Mm9::chr3:88425381..88425461,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:88425381..88425461,+
|DHSsupport=NA
|short_description=p2@Arhgef2
|DPIdataset=NA
|description=CAGE_peak_2_at_Arhgef2_5end
|association_with_transcript=65bp_to_NM_001198912,NM_001198913,uc008pvy.2,uc008pvz.2_5end
|EntrezGene=16800
|EntrezGene=16800
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q60875
|UniProt=Q60875
|association_with_transcript=65bp_to_NM_001198912,NM_001198913,uc008pvy.2,uc008pvz.2_5end
|cluster_id=chr3:88425381..88425461,+
|description=CAGE_peak_2_at_Arhgef2_5end
|id=chr3:88425381..88425461,+
|ontology_enrichment_celltype=CL:0000540!8.34e-17!33;CL:0000047!8.34e-17!33;CL:0000031!8.34e-17!33;CL:0000404!8.34e-17!33;CL:0002319!3.20e-14!43;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0000117!2.59e-13!23;CL:0000337!2.59e-13!23;CL:0000393!8.37e-12!39;CL:0000211!8.37e-12!39;CL:0000055!1.29e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.61e-17,33;CL:0000047,7.61e-17,33;CL:0000031,7.61e-17,33;CL:0000404,7.61e-17,33;CL:0002319,3.78e-14,43;CL:0000221,1.39e-13,44;CL:0000133,1.39e-13,44;CL:0000117,2.41e-13,23;CL:0000337,2.41e-13,23;CL:0000393,7.87e-12,39;CL:0000211,7.87e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.58e-28!73;UBERON:0005743!7.58e-28!73;UBERON:0000073!3.96e-26!75;UBERON:0001016!3.96e-26!75;UBERON:0002346!3.22e-21!71;UBERON:0003075!3.22e-21!71;UBERON:0007284!3.22e-21!71;UBERON:0004121!5.16e-21!102;UBERON:0000924!5.16e-21!102;UBERON:0006601!5.16e-21!102;UBERON:0001049!5.74e-19!52;UBERON:0005068!5.74e-19!52;UBERON:0006241!5.74e-19!52;UBERON:0007135!5.74e-19!52;UBERON:0000033!1.21e-18!63;UBERON:0000955!1.42e-17!50;UBERON:0006238!1.42e-17!50;UBERON:0003056!2.62e-17!49;UBERON:0002616!5.93e-17!49;UBERON:0002020!2.45e-15!34;UBERON:0003080!2.63e-14!40;UBERON:0002780!7.44e-14!39;UBERON:0001890!7.44e-14!39;UBERON:0006240!7.44e-14!39;UBERON:0002791!1.10e-12!29;UBERON:0003528!1.10e-12!29;UBERON:0001893!1.10e-12!29;UBERON:0000153!5.29e-12!94;UBERON:0007811!1.60e-10!86;UBERON:0000956!3.56e-09!21;UBERON:0001869!3.56e-09!21;UBERON:0000203!3.56e-09!21;UBERON:0002619!6.53e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.46e-28,73;UBERON:0001016,4.45e-26,75;UBERON:0002346,1.06e-23,64;UBERON:0003075,1.06e-23,64;UBERON:0007284,1.06e-23,64;UBERON:0004121,1.99e-22,95;UBERON:0000924,1.99e-22,95;UBERON:0006601,1.99e-22,95;UBERON:0000073,9.07e-20,54;UBERON:0001049,5.16e-19,52;UBERON:0005068,5.16e-19,52;UBERON:0006241,5.16e-19,52;UBERON:0007135,5.16e-19,52;UBERON:0010371,3.40e-18,73;UBERON:0010314,1.30e-17,92;UBERON:0003056,2.39e-17,49;UBERON:0000955,2.44e-16,47;UBERON:0006238,2.44e-16,47;UBERON:0002616,1.00e-15,46;UBERON:0002020,2.25e-15,34;UBERON:0003080,2.43e-14,40;UBERON:0002780,6.91e-14,39;UBERON:0001890,6.91e-14,39;UBERON:0006240,6.91e-14,39;UBERON:0003528,1.03e-12,29;UBERON:0002791,1.03e-12,29;UBERON:0001893,1.03e-12,29;UBERON:0000956,3.40e-09,21;UBERON:0001869,3.40e-09,21;UBERON:0000203,3.40e-09,21;UBERON:0002619,6.32e-07,17
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|phase1_expression=6.72625157840135,0,0.909998478779072,0,0,0.503637815735669,0.467225281191051,2.7115897922731,3.51971805379167,4.21316147379588,3.25314139628459,2.07407613387875,1.19840510951844,1.31130603628496,0,1.61980213911861,0.699561878128147,0.946386496074713,1.91960207048034,0.42438965179803,4.16712121740242,8.14185799847259,6.52999472847338,0.95995453676044,0.45881856213434,0,0,0,0,0.252030129759931,0,4.44521471421742,1.23012957516914,0,0,0.166234645358492,0.204169356262369,2.92972141515835,1.5626706890476,2.09409497589519,1.17646297606203,1.36609096991689,2.91306211818692,1.51076181570693,2.23029248682932,3.12029478674859,4.69434806608824,10.9012578190223,3.73466510648602,4.86074747685709,5.17949760013841,14.3752564364972,0.503347818173209,0.725362142011344,0.672187598284928,1.28629718017973,1.14613375975503,1.54701627683233,45.1165707716903,56.0730438028355,48.1711866664696,3.38844532069132,4.4464739805557,7.19919773825119,6.92206453796882,7.104801149461,9.28760342607055,8.4528027170742,38.5725357787537,45.0919834027847,42.0649922702764,17.424710048632,16.565140571371,39.3195465480002,40.542634240714,52.3954708367712,18.7196997698961,14.0456071893706,11.366883460962,46.0283144178377,49.0373769708916,38.0266760506435,12.0048689570594,8.4414391504752,11.1542720877071,15.0260578591571,18.9354335462807,39.3302830691384,0.832988126665025,2.34271836331035,3.47837386442013,0,0,0,0,1.34408066129201,1.82577746171277,2.38602451609281,1.55871602761721,2.12003744706204,2.53518155598025,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.506719730950197,1.01104889002957,1.48439043634778,1.8125651855302,1.63286352971307,8.84775166507293,6.69824052286711,5.76538743140146,4.6724018571313,4.8211369925639,1.13099932196708,1.48316980640624,2.89198713839823,1.76922110389975,8.25010934731787,1.54589062922275,1.45462575940567,0,12.0040126774734,10.2628886338593,0,4.07371423320129,2.99951365496704,3.55796635804581,15.5782264981016,16.9275223042892,26.7643770000401,15.8180131374972,12.7857728665165,13.9217989854905,14.1149898868949,6.61955865027056,4.60305791257344,1.76905930903572,1.05220927943237,16.9156575851515,19.0818746679783,15.1252189036493,20.4958552256572,17.1451977861346,17.5515796790244,18.3655380137068,10.3481348295606,10.1316956678436,16.4522289746003,20.0584281546902,13.3709396780821,14.1804097105055,7.3132954969655,6.79081050146213,10.5488161413801,5.61770549850588,2.57347907114715,3.6941254921427,10.5634143993106,11.4917769390737,8.82304101158973,8.99629995223799,9.83821158737019,8.63895832169318,9.06882384526591,6.17028823219124,5.3712057488898,6.25327429671226,5.41752631461014,3.89130285820108,3.21639972335731,3.29325172936576,3.22095405024892,6.9395683026162,34.9875682089567,0.660837565967596,0.264450566663544,16.8497717922835,14.1664369834868,7.21657783403723,6.6555563125703,4.00280478920767,2.47293313946327,0.474529061544512,1.97638745668813,2.5133520880027,3.97912944082302,2.14460495831032,1.79763881730844,0.648414149624083,0.398282546508734,8.34538764193559,9.36837803399776,9.01661885384643,10.386217720111,8.72786192254316,6.24208797023835,4.11037491307672,3.83786384746966,3.92496819603437,2.83813477020141,1.1858105083486,3.67059232575407,4.52085688760367,1.79889689907883,1.21716072833102,1.68824011826692,1.52775511068852,1.15078454980324,1.45921704097532,0.549122826376163,4.31304619582064,2.97712758134803,0.936113019343682,0.505157755894224,0.538192240565737,0.482443521363367,2.40179147216586,11.5589761179996,9.61493361007953,9.84521497496091,9.62230017982859,7.03526281255626,6.42717830392237,5.07347484430277,5.51723004371669,4.65075848262427,5.89982644032702,5.57135270033509,3.62638461918381,2.74833211304872,9.04747703635634,5.98296252200581,2.95058563811422,1.65562047782839,14.1284519189257,15.8235776899474,1.14754461763673,1.76729649043061,12.304820557234,18.350620981942,14.6487910458303,10.0366895140072,13.3679204449436,16.9845918473299,13.7635638569464,18.4121190484126,21.3455400091123,23.7777774152137,3.40656204499845,12.1084610493734,9.77321756121457,5.93892442701128,0,8.49732226542435,6.65111825322452,3.96070667487386,4.42952839321159,6.7635732547664,4.39328098385976,3.99887102425256,2.13898427030833,1.26414703174326,0,0,3.74483566329167,13.5045820523483,10.4780533864031,8.57348140126369,8.33499098118686,8.02659679209317,10.6956863391379,9.74287837166718,7.04015124191131,5.2958017715955,0.220528398054962,1.31909002353184,3.06782410722221,2.47282992205439,0.954978752025092,1.47726809770555,0.291480836629851,17.6154036909984,1.87957968877638,6.60437977482312,4.07427960213366,2.26042148405629,0.683471138605126,0.228778173206523,4.9293744698218,7.27747552083022,4.00779924032829,0,16.7658076598002,9.75933442208874,7.12835249423888,7.10900206449194,4.36725127492355,3.2367443132357,3.30613822901344,1.57053565190418,0.518459893167171,2.4853572523477,1.12738587736838,9.27002585472668,7.61109056102649,12.250424865675,9.29950729039664,11.3200604078821,10.9142231940551,5.7289929331338,6.08184197669123,3.14059357073808,0.576060012515731,1.89606672376907,6.48720688928525,6.67621221571377,2.85825810551149,3.58053391334963,3.77494574084403,2.52410443991935,1.9199638532695,2.72609414859999,2.81965184623499,1.91569751759997,3.8983152295901,2.11666051608725,1.98690733708667,1.36038230169127,5.32766288097755,2.51198798506532,3.69346156000973,2.12508553435409,2.81523713176773,3.11357761254351,1.2862102744744,1.50471631210609,14.6835479080437,10.1271552031579,13.1765968091061,13.0608418581203,14.3867329151835,18.8848474347425,15.5255175053315,21.6154177547626,16.3131267234314,20.192652158321,16.5021882658841,24.3405172774629,20.317299084742,12.8846560046196,12.7864029203069,9.55986243940074,9.77885602327107,9.47761263298913,10.2694147069381,8.59170519996911,10.3926512954998,9.05406438653166,9.64507526939789,9.21962194630118,8.6727558122976,13.3362233559261,11.8202012463753,8.10218725947561,8.65380391686944,10.3039244094078,13.0290315906458,9.58369353260422,8.58370283810355,9.30217066446903,9.03450051987174,10.3229821627845,8.04883080640199,9.99664903463803,8.55565917228929,8.41713407486608,8.30445126869219,8.66839444904958,11.4584692087513,8.2116525828562,10.0311437710194,21.7335202806013,10.5269223800434,6.23126056740065,7.46024495068489,6.83833399270498,2.78241402744506
|short_description=p2@Arhgef2
}}
}}

Latest revision as of 20:03, 25 September 2015

Short description:p2@Arhgef2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arhgef2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 65bp_to_NM_001198912, NM_001198913, uc008pvy.2, uc008pvz.2_5end
EntrezGene:Arhgef2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arhgef2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C345.12
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C748.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F545.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D942.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.54
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D652.40
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D446.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F449.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.33
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I210.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F126.76
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B214.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C616.92
eyeball, embryo E14.CNhs10521.399-16E219.08
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D420.50
eyeball, neonate N00.CNhs11207.633-15C617.15
eyeball, neonate N01.CNhs11140.1532-43E717.55
eyeball, neonate N02.CNhs11205.1551-44G818.37
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H216.45
forelimb, embryo E13.CNhs10589.384-1E220.06
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E910.56
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C68.64
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G134.99
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D514.17
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F89.37
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I210.39
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G76.24
kidney, neonate N10.CNhs11206.758-6D54.11
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F89.61
lung, embryo E15.CNhs11020.432-17C59.85
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.35
olfactory brain, adult.CNhs10489.18-22I923.78
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E613.50
pituitary gland, embryo E13.CNhs11009.370-44C710.48
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C917.62
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D47.13
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G512.25
testis, embryo E17.CNhs11029.486-18I59.30
testis, embryo E18.CNhs11027.503-18G511.32
testis, neonate N00.CNhs11189.1300-22B710.91
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I26.68
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A23.90
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I816.50
whole body, embryo E12.CNhs10587.857-27C924.34
whole body, embryo E13.CNhs10512.372-23H220.32
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B112.79
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.58
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I521.73
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.61e-1733
neuronal stem cell7.61e-1733
neuroblast7.61e-1733
electrically signaling cell7.61e-1733
neural cell3.78e-1443
ectodermal cell1.39e-1344
neurectodermal cell1.39e-1344
CNS neuron (sensu Vertebrata)2.41e-1323
neuroblast (sensu Vertebrata)2.41e-1323
electrically responsive cell7.87e-1239
electrically active cell7.87e-1239

Uber anatomy
Ontology termp-valuen
central nervous system6.46e-2873
nervous system4.45e-2675
neurectoderm1.06e-2364
neural plate1.06e-2364
presumptive neural plate1.06e-2364
ectoderm-derived structure1.99e-2295
ectoderm1.99e-2295
presumptive ectoderm1.99e-2295
regional part of nervous system9.07e-2054
neural tube5.16e-1952
neural rod5.16e-1952
future spinal cord5.16e-1952
neural keel5.16e-1952
ecto-epithelium3.40e-1873
structure with developmental contribution from neural crest1.30e-1792
pre-chordal neural plate2.39e-1749
brain2.44e-1647
future brain2.44e-1647
regional part of brain1.00e-1546
gray matter2.25e-1534
anterior neural tube2.43e-1440
regional part of forebrain6.91e-1439
forebrain6.91e-1439
future forebrain6.91e-1439
brain grey matter1.03e-1229
regional part of telencephalon1.03e-1229
telencephalon1.03e-1229
cerebral cortex3.40e-0921
cerebral hemisphere3.40e-0921
pallium3.40e-0921
regional part of cerebral cortex6.32e-0717
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