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FFCP PHASE1:Mm9::chr4:106351479..106351521,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:106351479..106351521,-
|DHSsupport=NA
|short_description=p1@Ttc4
|DPIdataset=NA
|description=CAGE_peak_1_at_Ttc4_5end
|association_with_transcript=0bp_to_ENSMUST00000127571,ENSMUST00000132572,ENSMUST00000135676_5end
|EntrezGene=72354
|EntrezGene=72354
|HGNC=
|HGNC=
|MCL_coexpression_id=2929
|TSSclassifier=NA
|UniProt=A2AVR1
|UniProt=A2AVR1
|association_with_transcript=0bp_to_ENSMUST00000127571,ENSMUST00000132572,ENSMUST00000135676_5end
|cluster_id=chr4:106351479..106351521,-
|description=CAGE_peak_1_at_Ttc4_5end
|id=chr4:106351479..106351521,-
|ontology_enrichment_celltype=CL:0000117!3.39e-13!23;CL:0000337!3.39e-13!23;CL:0000540!3.17e-09!33;CL:0000047!3.17e-09!33;CL:0000031!3.17e-09!33;CL:0000404!3.17e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-13,23;CL:0000337,3.39e-13,23;CL:0000540,3.17e-09,33;CL:0000047,3.17e-09,33;CL:0000031,3.17e-09,33;CL:0000404,3.17e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.30e-17,54;UBERON:0002346,2.63e-17,64;UBERON:0003075,2.63e-17,64;UBERON:0007284,2.63e-17,64;UBERON:0001049,1.35e-16,52;UBERON:0005068,1.35e-16,52;UBERON:0006241,1.35e-16,52;UBERON:0007135,1.35e-16,52;UBERON:0003056,6.62e-15,49;UBERON:0010371,2.57e-14,73;UBERON:0001017,3.53e-14,73;UBERON:0000955,7.18e-14,47;UBERON:0006238,7.18e-14,47;UBERON:0003080,9.83e-14,40;UBERON:0002616,2.49e-13,46;UBERON:0002780,4.23e-13,39;UBERON:0001890,4.23e-13,39;UBERON:0006240,4.23e-13,39;UBERON:0002020,5.21e-13,34;UBERON:0001016,6.55e-13,75;UBERON:0004121,5.88e-12,95;UBERON:0000924,5.88e-12,95;UBERON:0006601,5.88e-12,95;UBERON:0010314,8.09e-12,92;UBERON:0003528,2.82e-10,29;UBERON:0002791,2.82e-10,29;UBERON:0001893,2.82e-10,29;UBERON:0000922,2.84e-07,320;UBERON:0000956,3.43e-07,21;UBERON:0001869,3.43e-07,21;UBERON:0000203,3.43e-07,21
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022350336,36.937826561056,39.3085996507201,36.2481855818655,28.591241433582,27.9368680351635,23.5580347785627,36.4218074949938,21.1255366449555,33.8215763210514,46.3501292736334,41.1991641238173,33.8345067718643,28.6734808120563,31.4258393412847,43.422178298929,31.249052362548,37.5396453044045,60.1544460856755,50.1172210888686,35.0772343897278,33.8551109534574,35.8461240505247,40.4053759460943,35.2682590464938,31.1929727006586,35.3374621588708,38.1038980110409,47.3532650256812,36.9603012276749,34.5833815019363,37.3263683233252,34.5400511488783,41.6081771766385,29.9284106372079,38.8475418404613,55.0843079582181,34.5842309710002,28.398870322732,26.2755465631655,32.9672923681077,26.152942247646,25.0786052017682,46.3096510945995,46.0325236507177,48.1232231289093,40.9010573977977,45.900528824633,46.0790277407717,44.5514850152992,37.8269810708345,60.2679403948992,47.1161883694156,40.5808529054131,52.6712832889361,38.4150612946802,36.7091142773124,36.8919166225249,28.6795873182022,38.0041904540762,39.9708011043455,34.0174362167324,39.1680678233886,33.9662261852921,36.7821365702849,38.5803010775916,34.8937080606538,36.1843454420364,36.6746142287967,30.477577723497,31.2512937151202,38.3239887747075,34.2973483913146,37.7156177623957,37.6248709057795,42.4416418106231,39.388878907361,37.5496427857169,37.8227297275794,34.7563148458268,35.5144110441088,36.395502510691,38.1576744727262,29.302849476671,36.9391808908363,40.1046422306296,37.8045892493757,33.5657503107186,28.2285953069879,32.5164935739118,35.6685949720175,29.4584031386019,26.6915617134614,34.5483075074428
|phase1_expression=34.9124486688451,12.563114675017,12.739978702907,20.5675663688644,17.0304548181758,17.9630820945722,21.9595882159794,35.638037269875,16.1907030474417,14.9801296846076,36.6406452002581,40.3647124516402,31.5009343073419,35.143001772437,31.9785371343036,30.1688148410841,39.8750270533044,31.7039476185029,34.0043795342232,28.00971701867,30.7856710346873,35.7447424323187,36.0455709011731,21.5989770771099,20.6468352960453,12.0588712464154,17.230479846363,20.2542958724736,28.6935363379125,19.6583501212746,27.4945833212578,36.8317790606586,36.9038872550742,31.6963362030877,34.662194370153,31.750817263472,26.542016314108,15.4856703372656,16.4080422349998,18.3233310390829,11.1763982725893,15.7100461540443,16.0218416500281,18.8845226963366,16.1189320639028,18.5382219683298,8.60630478782843,15.0437357902508,16.9158360705543,30.9143539528111,24.3576373628131,5.75010257459886,22.4828692117367,21.035502118329,19.8295341494054,22.1243114990914,26.9341433542431,22.17389996793,53.816178588653,65.5948814297321,53.2418378945191,11.8595586224196,8.89294796111139,7.64914759689189,9.88866362566974,14.209602298922,8.68840320503374,8.06858441175265,47.0750839880489,49.9521971827255,41.854667308925,45.132855535801,53.8919239921937,50.711190874991,54.5360730093765,54.2339084099912,50.6533052597188,46.8612530772639,46.3891730433855,64.3605084123346,72.366726089506,69.2814782840491,50.2529398202486,39.3933827022176,39.2691496786402,48.6137166031552,62.3587961900071,54.4286381809878,22.9450365799548,25.0897579554528,33.6242806893946,21.5105969245347,14.9593693415705,33.4615978815447,31.8390444549358,30.9138552097162,29.7742170679314,25.3941180641306,21.5622383820381,17.3136391510067,31.5489260299764,21.815501160434,43.3168907501298,7.11066703153331,24.0305055522448,22.8023878927589,26.7927955857835,25.6913729367885,28.2242293175417,24.9382793628906,31.5743294714367,37.1447883540812,28.5963216597513,33.3097035621296,32.4544831694545,23.24831939599,46.967043869531,26.4616823163438,33.6152009740952,33.1622042392189,28.9302389183116,40.7295212633587,26.0948465705371,44.2099003487436,46.0782754989601,32.1875889562825,25.9998820177847,28.1954283566902,29.2261522268049,58.8677212860953,48.0375632959558,36.1884534085049,42.5869584471077,52.4216687527178,52.9859513626878,49.3213439725983,31.570202793598,26.9963126223902,28.3049489445716,31.987162094744,50.6168523124917,34.7152177694544,40.5139792062036,44.1565116258645,39.7333155043755,43.5586648968489,34.3885329134205,42.4273528011986,49.7962063674866,55.408081489171,47.3308524001022,46.4694952746459,52.8289773528636,29.9496863209063,41.9795558272205,40.4039561641541,26.6841011179029,27.2788781541598,24.1538974486254,40.5966514169584,37.9932217169376,40.3339017672673,35.2749656021963,38.1722609589963,35.6357030769844,38.6006348285677,29.2418007525585,35.2631333948852,37.8487654801005,36.7735119537173,30.4008035796959,33.4797971204011,30.9565662560381,31.8069212462081,46.263788684108,42.3967003002652,42.2936042219261,26.1806060996909,44.3639561113287,47.6085177313899,35.1808169409315,33.0760980382282,31.3553041821267,29.2947464213341,30.3698599388487,29.4811128955979,23.3741744184251,31.0372096384195,32.1690743746548,39.5480539807857,35.2305021295752,35.6462879125317,47.4169752382704,46.1563990943304,37.1935527721165,47.6544107158035,43.8332620998834,38.7149725794558,34.9698050297143,38.5262486226762,41.6046628779643,39.1169009632108,20.7516838961004,33.3690211432188,33.4150291692445,33.5044547453432,29.6175777227214,30.3883221288045,36.411496804743,32.2219673944908,30.1571521801566,32.6728081693817,21.5652309791032,29.7712758134803,35.5722947350599,27.025939940341,30.3181628852032,27.9817242390753,26.6044593839911,37.519299530556,44.9783334979991,42.0967812722467,47.4074301542774,35.1763140627813,32.6119788013839,25.3673742215138,37.2018940090611,39.4207147574819,34.1233204927022,31.297893110706,25.9027472798843,29.5084079506284,30.1582567878545,22.3001330365671,26.555270743028,29.2492951083016,46.7202216864475,52.3936239067148,34.2624035837252,49.4843017320571,29.0267561862956,33.5777320095109,39.8533285805678,26.2865677747807,32.5286064160295,23.2122755246843,34.0040989406911,35.3629588072687,39.5287777946523,50.4474466782237,26.1169756783214,44.1602697094793,32.2516179520081,35.1386361931501,29.2039304347918,34.7176309701623,35.9765032788054,43.1905632641007,27.1677741450311,38.4293934929909,27.6518273689997,36.3533729477506,38.5017168655499,30.97160227771,25.3004660579997,34.0347292719017,43.9167091422387,48.7965564824851,51.7434735131018,39.0093403757498,43.9803779432838,35.8521323380162,41.9600002535408,33.7956093517205,27.9259332595815,29.6564899209348,26.2428793685405,35.6154306353597,33.9075296061402,33.292734560342,29.8430860007841,29.7095028538561,27.1077178065761,47.28345201268,27.85195357005,33.8474463459685,37.9648781107909,40.8759551700179,34.5836396134194,29.2836061704349,24.1369370591275,25.6111157752294,26.9489948918626,26.7307773044232,36.22047126504,44.9336022350336,36.937826561056,39.3085996507201,36.2481855818655,28.591241433582,27.9368680351635,23.5580347785627,36.4218074949938,21.1255366449555,33.8215763210514,46.3501292736334,41.1991641238173,33.8345067718643,28.6734808120563,31.4258393412847,43.422178298929,31.249052362548,37.5396453044045,60.1544460856755,50.1172210888686,35.0772343897278,33.8551109534574,35.8461240505247,40.4053759460943,35.2682590464938,31.1929727006586,35.3374621588708,38.1038980110409,47.3532650256812,36.9603012276749,34.5833815019363,37.3263683233252,34.5400511488783,41.6081771766385,29.9284106372079,38.8475418404613,55.0843079582181,34.5842309710002,28.398870322732,26.2755465631655,32.9672923681077,26.152942247646,25.0786052017682,46.3096510945995,46.0325236507177,48.1232231289093,40.9010573977977,45.900528824633,46.0790277407717,44.5514850152992,37.8269810708345,60.2679403948992,47.1161883694156,40.5808529054131,52.6712832889361,38.4150612946802,36.7091142773124,36.8919166225249,28.6795873182022,38.0041904540762,39.9708011043455,34.0174362167324,39.1680678233886,33.9662261852921,36.7821365702849,38.5803010775916,34.8937080606538,36.1843454420364,36.6746142287967,30.477577723497,31.2512937151202,38.3239887747075,34.2973483913146,37.7156177623957,37.6248709057795,42.4416418106231,39.388878907361,37.5496427857169,37.8227297275794,34.7563148458268,35.5144110441088,36.395502510691,38.1576744727262,29.302849476671,36.9391808908363,40.1046422306296,37.8045892493757,33.5657503107186,28.2285953069879,32.5164935739118,35.6685949720175,29.4584031386019,26.6915617134614,34.5483075074428
|short_description=p1@Ttc4
}}
}}

Latest revision as of 02:36, 26 September 2015

Short description:p1@Ttc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ttc4_5end
Coexpression cluster:MCL_coexpression_mm9:2929
Association with transcript: 0bp_to_ENSMUST00000127571, ENSMUST00000132572, ENSMUST00000135676_5end
EntrezGene:Ttc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ttc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E935.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F140.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E431.50
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.17
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.70
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H235.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D220.65
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I220.25
Ileum epithelium, pool1.CNhs13199.10252-104B928.69
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I336.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.75
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.04
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C330.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E126.93
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C353.82
Mouse Granule cells, donor2.CNhs12357.11731-123E365.59
Mouse Granule cells, donor3.CNhs12108.11636-122C753.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D547.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F549.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.85
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D553.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D250.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F254.54
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D746.39
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D464.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F472.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D869.28
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E450.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F662.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E154.43
Mouse Schwann, donor1.CNhs12507.11728-123D922.95
Mouse Schwann, donor2.CNhs12573.11746-123F925.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C833.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.69
accessory axillary lymph node, adult.CNhs10475.1063-29H928.22
adrenal gland, adult.CNhs10508.49-24D724.94
adrenal gland, embryo E14.CNhs11038.406-44C531.57
adrenal gland, embryo E16.CNhs11004.1254-43D637.14
adrenal gland, embryo E17.CNhs11043.1263-45I128.60
adrenal gland, embryo E18.CNhs11026.1262-18F533.31
adrenal gland, neonate N00.CNhs11191.1311-23C132.45
adrenal gland, neonate N25.CNhs11223.1377-27I323.25
amnion, adult pregnant day17.5.CNhs10488.583-22A846.97
aorta, adult.CNhs10498.46-23H126.46
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F533.16
bone (os femoris), neonate N16.CNhs11225.1525-43A628.93
bone (os femoris), neonate N20.CNhs11195.1350-25C340.73
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B244.21
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H732.19
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.23
corpora quadrigemina, adult.CNhs10501.16-22A458.87
corpus striatum, adult.CNhs10487.19-21D848.04
corpus striatum, neonate N00.CNhs11226.630-43F136.19
cortex, adult.CNhs10473.12-14D542.59
cortex, neonate N30.CNhs11107.1392-42F252.42
diencephalon, adult.CNhs10482.20-12F252.99
diencephalon, neonate N30.CNhs11201.1388-42B249.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.00
epididymis, adult.CNhs10490.58-23B228.30
eyeball, adult.CNhs10484.31-12G431.99
eyeball, embryo E12.CNhs11016.345-16C650.62
eyeball, embryo E14.CNhs10521.399-16E234.72
eyeball, embryo E15.CNhs10593.426-16C940.51
eyeball, embryo E17.CNhs11023.1261-18D444.16
eyeball, neonate N00.CNhs11207.633-15C639.73
eyeball, neonate N01.CNhs11140.1532-43E743.56
eyeball, neonate N02.CNhs11205.1551-44G834.39
eyeball, neonate N16.CNhs11188.777-19A242.43
forelimb, embryo E11.CNhs10596.335-25E249.80
forelimb, embryo E12.CNhs10600.359-14H255.41
forelimb, embryo E13.CNhs10589.384-1E247.33
forelimb, embryo E14.CNhs10577.413-26A846.47
forelimb, embryo E15.CNhs11007.437-20E752.83
forelimb, embryo E17.CNhs10598.1517-43C429.95
forelimb, embryo E18.CNhs11008.1520-43B541.98
gonad, embryo E13.CNhs11044.1564-45I640.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.28
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.15
heart, embryo E11.CNhs10586.331-24E940.60
heart, embryo E12.CNhs11015.353-12F537.99
heart, embryo E13.CNhs11013.376-3I940.33
heart, embryo E14.CNhs10597.403-26D435.27
heart, embryo E15.CNhs11017.431-16C838.17
heart, embryo E16.CNhs11021.457-17C635.64
heart, embryo E17.CNhs11025.479-18E538.60
heart, embryo E18.CNhs11030.1283-20G329.24
heart, neonate N00.CNhs11213.639-21E335.26
heart, neonate N03.CNhs11221.1349-25I237.85
heart, neonate N10.CNhs11118.749-24G136.77
heart, neonate N16.CNhs11209.782-15G130.40
heart, neonate N20.CNhs11127.821-26I633.48
heart, neonate N25.CNhs11196.1351-25D330.96
heart, neonate N30.CNhs11202.1390-42D231.81
hippocampus, adult.CNhs10478.13-16E846.26
hippocampus, neonate N00.CNhs11228.627-43G142.40
intestinal mucosa, adult.CNhs10506.860-29I342.29
intestine, adult.CNhs10496.178-9A326.18
intestine, embryo E12.CNhs11019.1251-16I544.36
intestine, embryo E13.CNhs11010.381-16D547.61
intestine, embryo E15.CNhs10602.976-16D835.18
intestine, embryo E16.CNhs10585.463-22H433.08
intestine, embryo E17.CNhs10582.482-18D331.36
intestine, embryo E18.CNhs10526.1289-20F729.29
intestine, neonate N00.CNhs11126.644-26D130.37
intestine, neonate N01.CNhs11192.1322-23E929.48
intestine, neonate N06.CNhs11102.688-20B823.37
intestine, neonate N07.CNhs11095.720-20F231.04
intestine, neonate N10.CNhs11098.755-23A532.17
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E335.23
intestine, neonate N30.CNhs11131.1384-42G135.65
kidney, embryo E14.CNhs10606.411-4I947.42
kidney, embryo E15.CNhs10997.434-16F846.16
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I247.65
kidney, embryo E18.CNhs11001.1288-20C743.83
kidney, neonate N00.CNhs11214.646-21G738.71
kidney, neonate N10.CNhs11206.758-6D534.97
kidney, neonate N20.CNhs11113.832-19I138.53
kidney, neonate N25.CNhs11122.1353-25F341.60
kidney, neonate N30.CNhs11203.1385-42H139.12
liver, adult pregnant day01.CNhs10466.508-5B220.75
liver, embryo E12.CNhs10601.355-15F833.37
liver, embryo E13.CNhs10524.378-3H633.42
liver, embryo E14.CNhs10594.409-16E133.50
liver, embryo E15.CNhs10520.433-16D729.62
liver, embryo E16.CNhs10523.462-17F530.39
liver, embryo E17.CNhs10510.481-18A336.41
liver, embryo E18.CNhs10579.499-43G432.22
liver, neonate N00.CNhs11117.641-24F430.16
liver, neonate N03.CNhs11123.1345-25G232.67
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H229.77
liver, neonate N10.CNhs11115.751-24B935.57
liver, neonate N20.CNhs11220.823-25A327.03
liver, neonate N25.CNhs11198.1368-26H130.32
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B126.60
lung, embryo E12.CNhs10522.354-16G237.52
lung, embryo E14.CNhs10604.404-26F844.98
lung, embryo E15.CNhs11020.432-17C542.10
lung, embryo E16.CNhs10998.458-17B647.41
lung, embryo E17.CNhs10605.480-44A635.18
lung, embryo E18.CNhs10583.1287-20I632.61
lung, neonate N00.CNhs11224.640-42C625.37
lung, neonate N06.CNhs11212.683-20E537.20
lung, neonate N07.CNhs11111.715-19A339.42
lung, neonate N10.CNhs11219.750-23E634.12
lung, neonate N20.CNhs11109.822-18A431.30
lung, neonate N25.CNhs11119.1359-25C725.90
lung, neonate N30.CNhs11133.1394-42H229.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.30
mammary gland, adult lactating day02.CNhs10480.595-22B626.56
mammary gland, adult pregnant day19.CNhs10476.588-5H229.25
medulla oblongata, adult.CNhs10477.17-12C246.72
medulla oblongata, neonate N30.CNhs11200.1396-42A352.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C734.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.48
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.58
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E339.85
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.53
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D434.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.36
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.53
olfactory brain, adult.CNhs10489.18-22I950.45
ovary, adult.CNhs10507.91-2I726.12
ovary, embryo E18.CNhs11040.505-44H744.16
ovary, neonate N00.CNhs11217.1299-22I432.25
oviduct, adult pregnant day01.CNhs10500.988-6G635.14
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F434.72
pancreas, embryo E15.CNhs11042.1556-45F235.98
pancreas, embryo E16.CNhs11003.460-26E543.19
pancreas, embryo E17.CNhs10599.1558-45G327.17
pancreas, embryo E18.CNhs10580.1535-43I738.43
pancreas, neonate N00.CNhs11105.645-26G927.65
pancreas, neonate N01.CNhs11138.1531-43D736.35
pancreas, neonate N02.CNhs11139.1539-43D838.50
pancreas, neonate N16.CNhs11136.787-43B630.97
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G843.92
pituitary gland, embryo E12.CNhs11018.346-16E648.80
pituitary gland, embryo E13.CNhs11009.370-44C751.74
pituitary gland, embryo E14.CNhs11037.398-44A539.01
pituitary gland, embryo E15.CNhs10592.427-16B943.98
pituitary gland, embryo E16.CNhs11036.449-43F635.85
pituitary gland, embryo E17.CNhs11039.1265-44F541.96
pituitary gland, neonate N00.CNhs11190.1308-22E933.80
placenta, adult pregnant day10.CNhs10472.539-13I727.93
placenta, adult pregnant day17.CNhs10464.577-18G329.66
prostate, adult.CNhs10470.859-1F826.24
skin, adult.CNhs10492.30-1C335.62
skin, neonate N00.CNhs11124.650-25G433.91
skin, neonate N03.CNhs11215.662-22H333.29
skin, neonate N06.CNhs11097.693-20I529.84
skin, neonate N10.CNhs11108.762-6C429.71
small intestine, neonate N16.CNhs11114.790-21I127.11
spinal cord, adult.CNhs10505.24-13C947.28
spleen, adult.CNhs10465.25-2G227.85
spleen, embryo E16.CNhs11035.461-43C133.85
spleen, embryo E18.CNhs11011.1271-21F237.96
spleen, neonate N10.CNhs11116.752-24D140.88
spleen, neonate N20.CNhs11112.824-19H134.58
spleen, neonate N25.CNhs11099.1354-25G329.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.95
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E336.22
stomach, embryo E15.CNhs10603.1252-16G844.93
stomach, embryo E16.CNhs11022.459-17D436.94
stomach, embryo E17.CNhs11006.1035-18D539.31
stomach, embryo E18.CNhs10999.1286-20C636.25
stomach, neonate N03.CNhs11193.1340-24B828.59
stomach, neonate N07.CNhs11210.718-18A927.94
stomach, neonate N25.CNhs11104.1355-25E423.56
stomach, neonate N30.CNhs11134.1386-42I136.42
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G533.82
testis, embryo E13.CNhs11031.389-23F546.35
testis, embryo E15.CNhs11034.443-27C541.20
testis, embryo E16.CNhs11033.470-26G533.83
testis, embryo E17.CNhs11029.486-18I528.67
testis, embryo E18.CNhs11027.503-18G531.43
testis, neonate N00.CNhs11189.1300-22B743.42
testis, neonate N07.CNhs11222.726-26I431.25
testis, neonate N10.CNhs11204.763-44D937.54
testis, neonate N20.CNhs11110.839-18H360.15
testis, neonate N30.CNhs11130.1391-42E250.12
thymus, adult.CNhs10471.38-12B535.08
thymus, embryo E14.CNhs11041.402-44I433.86
thymus, embryo E15.CNhs11005.430-45I235.85
thymus, embryo E16.CNhs11002.456-26C540.41
thymus, embryo E17.CNhs10581.478-18C135.27
thymus, embryo E18.CNhs10595.1273-19G431.19
thymus, neonate N02.CNhs11181.1541-43F835.34
thymus, neonate N03.CNhs11137.2104-43C738.10
thymus, neonate N06.CNhs11197.681-26C447.35
thymus, neonate N07.CNhs11211.713-19D336.96
thymus, neonate N10.CNhs11194.748-24E434.58
thymus, neonate N20.CNhs11186.820-7A237.33
thymus, neonate N25.CNhs11125.1362-25G734.54
thymus, neonate N30.CNhs11132.1393-42G241.61
tongue, adult.CNhs10499.32-1B429.93
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H338.85
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F755.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G534.58
urinary bladder, adult.CNhs10481.879-12E428.40
uterus, adult pregnant day19.CNhs10497.590-15F526.28
uterus, adult.CNhs10509.92-27E532.97
vagina, adult.CNhs10502.89-27D526.15
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.08
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A644.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A860.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.12
whole body, embryo E11.CNhs11014.324-5I840.58
whole body, embryo E12.CNhs10587.857-27C952.67
whole body, embryo E13.CNhs10512.372-23H238.42
whole body, embryo E14.5.CNhs10578.420-27D236.71
whole body, embryo E14.CNhs10519.395-14B136.89
whole body, embryo E16.CNhs10514.453-14F228.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G539.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G536.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G536.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G539.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G537.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G534.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G536.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.80
whole body, embryo E17.5.CNhs10513.490-9F933.57
whole body, embryo E17.CNhs10517.475-3I528.23
whole body, embryo E18.CNhs10516.493-3B332.52
whole body, neonate N00.CNhs10525.657-19C235.67
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B434.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.39e-1323
neuroblast (sensu Vertebrata)3.39e-1323
neuron3.17e-0933
neuronal stem cell3.17e-0933
neuroblast3.17e-0933
electrically signaling cell3.17e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.30e-1754
neurectoderm2.63e-1764
neural plate2.63e-1764
presumptive neural plate2.63e-1764
neural tube1.35e-1652
neural rod1.35e-1652
future spinal cord1.35e-1652
neural keel1.35e-1652
pre-chordal neural plate6.62e-1549
ecto-epithelium2.57e-1473
central nervous system3.53e-1473
brain7.18e-1447
future brain7.18e-1447
anterior neural tube9.83e-1440
regional part of brain2.49e-1346
regional part of forebrain4.23e-1339
forebrain4.23e-1339
future forebrain4.23e-1339
gray matter5.21e-1334
nervous system6.55e-1375
ectoderm-derived structure5.88e-1295
ectoderm5.88e-1295
presumptive ectoderm5.88e-1295
structure with developmental contribution from neural crest8.09e-1292
brain grey matter2.82e-1029
regional part of telencephalon2.82e-1029
telencephalon2.82e-1029
embryo2.84e-07320
cerebral cortex3.43e-0721
cerebral hemisphere3.43e-0721
pallium3.43e-0721
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