FFCP PHASE1:Mm9::chr5:52581723..52581763,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:52581723..52581763,- to FFCP PHASE1:Mm9::chr5:52581723..52581763,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13204 | |EntrezGene=13204 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2348 | |||
|TSSclassifier=NA | |||
|UniProt=O35286,Q3UKJ6,Q497W9 | |UniProt=O35286,Q3UKJ6,Q497W9 | ||
|association_with_transcript=0bp_to_ENSMUST00000031061,NM_001042620,NM_007839,uc008xkf.1,uc008xkg.1,uc012dwe.1_5end | |||
|cluster_id=chr5:52581723..52581763,- | |||
|description=CAGE_peak_1_at_Dhx15_5end | |||
|id=chr5:52581723..52581763,- | |||
|ontology_enrichment_celltype=CL:0000542!5.76e-09!13;CL:0000051!5.76e-09!13;CL:0000838!2.18e-08!12;CL:0000084!9.68e-08!11;CL:0000827!9.68e-08!11;CL:0000791!3.27e-07!9;CL:0000789!3.27e-07!9;CL:0002420!3.27e-07!9;CL:0002419!3.27e-07!9;CL:0000790!3.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.76e-09,13;CL:0000051,5.76e-09,13;CL:0000838,2.18e-08,12;CL:0000084,9.68e-08,11;CL:0000827,9.68e-08,11;CL:0000791,3.27e-07,9;CL:0000789,3.27e-07,9;CL:0002420,3.27e-07,9;CL:0002419,3.27e-07,9;CL:0000790,3.27e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.57e-13!29;UBERON:0002370!1.66e-11!23;UBERON:0000974!1.66e-11!23;UBERON:0004807!1.66e-11!23;UBERON:0005058!1.66e-11!23;UBERON:0003351!1.66e-11!23;UBERON:0009113!1.66e-11!23;UBERON:0003295!1.66e-11!23;UBERON:0009722!1.66e-11!23;UBERON:0005562!1.66e-11!23;UBERON:0007690!1.66e-11!23;UBERON:0000065!5.06e-11!41;UBERON:0006562!7.80e-11!24;UBERON:0001557!7.80e-11!24;UBERON:0001042!7.80e-11!24;UBERON:0008814!7.80e-11!24;UBERON:0009145!7.80e-11!24;UBERON:0000072!1.21e-10!27;UBERON:0003408!1.44e-10!24;UBERON:0001004!2.11e-10!42;UBERON:0001041!1.68e-09!92;UBERON:0001048!4.04e-09!147;UBERON:0002390!4.28e-09!45;UBERON:0003061!4.28e-09!45;UBERON:0000077!1.81e-08!97;UBERON:0005057!2.30e-08!51;UBERON:0002193!2.55e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.57e-13,29;UBERON:0005057,3.57e-13,29;UBERON:0000153,1.61e-11,43;UBERON:0002370,1.66e-11,23;UBERON:0000974,1.66e-11,23;UBERON:0004807,1.66e-11,23;UBERON:0005058,1.66e-11,23;UBERON:0003351,1.66e-11,23;UBERON:0009113,1.66e-11,23;UBERON:0003295,1.66e-11,23;UBERON:0009722,1.66e-11,23;UBERON:0005562,1.66e-11,23;UBERON:0007690,1.66e-11,23;UBERON:0000065,5.06e-11,41;UBERON:0006562,7.80e-11,24;UBERON:0001557,7.80e-11,24;UBERON:0001042,7.80e-11,24;UBERON:0008814,7.80e-11,24;UBERON:0009145,7.80e-11,24;UBERON:0000072,1.21e-10,27;UBERON:0003408,1.44e-10,24;UBERON:0000077,1.49e-10,35;UBERON:0001004,2.11e-10,42;UBERON:0007811,5.83e-10,36;UBERON:0002390,4.28e-09,45;UBERON:0003061,4.28e-09,45;UBERON:0002193,2.55e-08,48;UBERON:0002405,2.55e-08,48;UBERON:0001041,3.24e-08,80;UBERON:0001048,2.16e-07,134 | |||
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| ||
|short_description=p1@Dhx15 | |||
}} | }} |
Latest revision as of 01:47, 26 September 2015
Short description: | p1@Dhx15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dhx15_5end |
Coexpression cluster: | MCL_coexpression_mm9:2348 |
Association with transcript: | 0bp_to_ENSMUST00000031061, NM_001042620, NM_007839, uc008xkf.1, uc008xkg.1, uc012dwe.1_5end |
EntrezGene: | Dhx15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.76e-09 | 13 |
common lymphoid progenitor | 5.76e-09 | 13 |
lymphoid lineage restricted progenitor cell | 2.18e-08 | 12 |
T cell | 9.68e-08 | 11 |
pro-T cell | 9.68e-08 | 11 |
mature alpha-beta T cell | 3.27e-07 | 9 |
alpha-beta T cell | 3.27e-07 | 9 |
immature T cell | 3.27e-07 | 9 |
mature T cell | 3.27e-07 | 9 |
immature alpha-beta T cell | 3.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.57e-13 | 29 |
immune organ | 3.57e-13 | 29 |
anterior region of body | 1.61e-11 | 43 |
thymus | 1.66e-11 | 23 |
neck | 1.66e-11 | 23 |
respiratory system epithelium | 1.66e-11 | 23 |
hemolymphoid system gland | 1.66e-11 | 23 |
pharyngeal epithelium | 1.66e-11 | 23 |
thymic region | 1.66e-11 | 23 |
pharyngeal gland | 1.66e-11 | 23 |
entire pharyngeal arch endoderm | 1.66e-11 | 23 |
thymus primordium | 1.66e-11 | 23 |
early pharyngeal endoderm | 1.66e-11 | 23 |
respiratory tract | 5.06e-11 | 41 |
pharynx | 7.80e-11 | 24 |
upper respiratory tract | 7.80e-11 | 24 |
chordate pharynx | 7.80e-11 | 24 |
pharyngeal arch system | 7.80e-11 | 24 |
pharyngeal region of foregut | 7.80e-11 | 24 |
segment of respiratory tract | 1.21e-10 | 27 |
gland of gut | 1.44e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 1.49e-10 | 35 |
respiratory system | 2.11e-10 | 42 |
craniocervical region | 5.83e-10 | 36 |
hematopoietic system | 4.28e-09 | 45 |
blood island | 4.28e-09 | 45 |
hemolymphoid system | 2.55e-08 | 48 |
immune system | 2.55e-08 | 48 |
foregut | 3.24e-08 | 80 |
primordium | 2.16e-07 | 134 |