FFCP PHASE1:Mm9::chr7:109082467..109082540,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:109082467..109082540,+ to FFCP PHASE1:Mm9::chr7:109082467..109082540,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=101706 | |EntrezGene=101706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=113 | |||
|TSSclassifier=NA | |||
|UniProt=Q80Y35,Q3TH77 | |UniProt=Q80Y35,Q3TH77 | ||
|association_with_transcript=-84bp_to_uc009ipz.1,uc009iqa.1_5end | |||
|cluster_id=chr7:109082467..109082540,+ | |||
|description=CAGE_peak_2_at_Numa1_5end | |||
|id=chr7:109082467..109082540,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.94e-22!94;UBERON:0007811!1.51e-21!86;UBERON:0000033!8.01e-16!63;UBERON:0003056!2.49e-14!49;UBERON:0002346!1.15e-13!71;UBERON:0003075!1.15e-13!71;UBERON:0007284!1.15e-13!71;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0000955!2.01e-12!50;UBERON:0006238!2.01e-12!50;UBERON:0002616!7.70e-12!49;UBERON:0001017!2.52e-11!73;UBERON:0005743!2.52e-11!73;UBERON:0001049!5.04e-11!52;UBERON:0005068!5.04e-11!52;UBERON:0006241!5.04e-11!52;UBERON:0007135!5.04e-11!52;UBERON:0003080!5.49e-11!40;UBERON:0000073!5.52e-11!75;UBERON:0001016!5.52e-11!75;UBERON:0002780!1.41e-10!39;UBERON:0001890!1.41e-10!39;UBERON:0006240!1.41e-10!39;UBERON:0002791!2.62e-09!29;UBERON:0003528!2.62e-09!29;UBERON:0001893!2.62e-09!29;UBERON:0000475!1.05e-08!200;UBERON:0002020!2.45e-08!34;UBERON:0000477!1.19e-07!154;UBERON:0000956!2.51e-07!21;UBERON:0001869!2.51e-07!21;UBERON:0000203!2.51e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.49e-14,49;UBERON:0002346,2.52e-14,64;UBERON:0003075,2.52e-14,64;UBERON:0007284,2.52e-14,64;UBERON:0004121,1.10e-13,95;UBERON:0000924,1.10e-13,95;UBERON:0006601,1.10e-13,95;UBERON:0010371,4.85e-13,73;UBERON:0000955,5.19e-12,47;UBERON:0006238,5.19e-12,47;UBERON:0002616,1.99e-11,46;UBERON:0001017,2.52e-11,73;UBERON:0000073,4.24e-11,54;UBERON:0001049,5.03e-11,52;UBERON:0005068,5.03e-11,52;UBERON:0006241,5.03e-11,52;UBERON:0007135,5.03e-11,52;UBERON:0003080,5.48e-11,40;UBERON:0001016,5.51e-11,75;UBERON:0002780,1.41e-10,39;UBERON:0001890,1.41e-10,39;UBERON:0006240,1.41e-10,39;UBERON:0010314,1.72e-10,92;UBERON:0003528,2.61e-09,29;UBERON:0002791,2.61e-09,29;UBERON:0001893,2.61e-09,29;UBERON:0007811,1.39e-08,36;UBERON:0002020,2.45e-08,34;UBERON:0000153,4.49e-08,43;UBERON:0000956,2.51e-07,21;UBERON:0001869,2.51e-07,21;UBERON:0000203,2.51e-07,21 | |||
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| ||
|short_description=p2@Numa1 | |||
}} | }} |
Latest revision as of 15:41, 25 September 2015
Short description: | p2@Numa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Numa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | -84bp_to_uc009ipz.1, uc009iqa.1_5end |
EntrezGene: | Numa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.49e-14 | 49 |
neurectoderm | 2.52e-14 | 64 |
neural plate | 2.52e-14 | 64 |
presumptive neural plate | 2.52e-14 | 64 |
ectoderm-derived structure | 1.10e-13 | 95 |
ectoderm | 1.10e-13 | 95 |
presumptive ectoderm | 1.10e-13 | 95 |
ecto-epithelium | 4.85e-13 | 73 |
brain | 5.19e-12 | 47 |
future brain | 5.19e-12 | 47 |
regional part of brain | 1.99e-11 | 46 |
central nervous system | 2.52e-11 | 73 |
regional part of nervous system | 4.24e-11 | 54 |
neural tube | 5.03e-11 | 52 |
neural rod | 5.03e-11 | 52 |
future spinal cord | 5.03e-11 | 52 |
neural keel | 5.03e-11 | 52 |
anterior neural tube | 5.48e-11 | 40 |
nervous system | 5.51e-11 | 75 |
regional part of forebrain | 1.41e-10 | 39 |
forebrain | 1.41e-10 | 39 |
future forebrain | 1.41e-10 | 39 |
structure with developmental contribution from neural crest | 1.72e-10 | 92 |
brain grey matter | 2.61e-09 | 29 |
regional part of telencephalon | 2.61e-09 | 29 |
telencephalon | 2.61e-09 | 29 |
craniocervical region | 1.39e-08 | 36 |
gray matter | 2.45e-08 | 34 |
anterior region of body | 4.49e-08 | 43 |
cerebral cortex | 2.51e-07 | 21 |
cerebral hemisphere | 2.51e-07 | 21 |
pallium | 2.51e-07 | 21 |