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FFCP PHASE1:Mm9::chr8:108282470..108282557,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:108282470..108282557,-
|DHSsupport=NA
|short_description=p1@Gfod2
|DPIdataset=NA
|description=CAGE_peak_1_at_Gfod2_5end
|association_with_transcript=0bp_to_ENSMUST00000135959,ENSMUST00000155038,NM_027469,uc009neb.1_5end
|EntrezGene=70575
|EntrezGene=70575
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=D3Z3T3,Q9CYH5
|UniProt=D3Z3T3,Q9CYH5
|association_with_transcript=0bp_to_ENSMUST00000135959,ENSMUST00000155038,NM_027469,uc009neb.1_5end
|cluster_id=chr8:108282470..108282557,-
|description=CAGE_peak_1_at_Gfod2_5end
|id=chr8:108282470..108282557,-
|ontology_enrichment_celltype=CL:0000117!1.30e-13!23;CL:0000337!1.30e-13!23;CL:0000221!1.06e-10!44;CL:0000133!1.06e-10!44;CL:0002319!1.92e-10!43;CL:0000540!2.04e-10!33;CL:0000047!2.04e-10!33;CL:0000031!2.04e-10!33;CL:0000404!2.04e-10!33;CL:0002321!1.06e-07!70;CL:0000220!1.06e-07!70;CL:0000055!1.87e-07!50;CL:0000393!5.50e-07!39;CL:0000211!5.50e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-13,23;CL:0000337,1.30e-13,23;CL:0000221,1.06e-10,44;CL:0000133,1.06e-10,44;CL:0002319,1.92e-10,43;CL:0000540,2.04e-10,33;CL:0000047,2.04e-10,33;CL:0000031,2.04e-10,33;CL:0000404,2.04e-10,33;CL:0002321,1.06e-07,70;CL:0000393,5.50e-07,39;CL:0000211,5.50e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.64e-22,73;UBERON:0004121,1.87e-21,95;UBERON:0000924,1.87e-21,95;UBERON:0006601,1.87e-21,95;UBERON:0002346,2.80e-21,64;UBERON:0003075,2.80e-21,64;UBERON:0007284,2.80e-21,64;UBERON:0001017,1.19e-20,73;UBERON:0000073,1.19e-19,54;UBERON:0001049,3.30e-19,52;UBERON:0005068,3.30e-19,52;UBERON:0006241,3.30e-19,52;UBERON:0007135,3.30e-19,52;UBERON:0001016,4.42e-19,75;UBERON:0003056,1.07e-16,49;UBERON:0000955,4.57e-16,47;UBERON:0006238,4.57e-16,47;UBERON:0002616,5.32e-16,46;UBERON:0003080,1.51e-14,40;UBERON:0002780,5.38e-14,39;UBERON:0001890,5.38e-14,39;UBERON:0006240,5.38e-14,39;UBERON:0002020,2.74e-13,34;UBERON:0003528,2.12e-10,29;UBERON:0002791,2.12e-10,29;UBERON:0001893,2.12e-10,29;UBERON:0010314,2.32e-10,92;UBERON:0000956,7.70e-07,21;UBERON:0001869,7.70e-07,21;UBERON:0000203,7.70e-07,21
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89115,13.7568415160092,12.4075198674035,6.4469695465762,12.5642852152334,15.6834117683069,4.34937519160848,2.81846469342095,8.37292657846281,12.0784698033681,10.1114617938905,8.26622870257479,7.60302564708502,7.62822051197401,12.2392121753313,15.4143236305795,7.9722759872582,6.91272015018877,6.32022241256356,9.12263468805739,9.55211901632893,7.14564526377873,5.19177417435696,7.54989148168807,5.4087952283986,5.1691334511102,5.25025539730368,7.08723301891499,6.04957110821043,5.55509920216589,5.8689223400601,8.53201385925453,12.2434407152214,3.10780334723691,4.30626511725483,3.52557694364565,9.65947970160952,10.5102186252662,10.6227942075014,16.7207335681671,11.034586288778,11.2950368523413,9.20650473014354,12.6037012956667,12.0297227640581,6.85082519770642,13.5970901530146,10.8003600037089,10.3573876741571,11.7817026335893,13.9795284172991,13.1809931431904,15.1629451892392,14.6830900948555,16.0450433265074,9.4325923182592,8.45680138870065,10.8900896622791,10.3017528619447,8.98573786857083,9.34979683526051,8.87177549615839,9.61994341068989,10.5814903440967,9.85987347034987,10.6255617567885,11.4310485907938,11.5884325944855,11.5745532278223,9.06588981767275,9.86232764900462,8.9146005620208,11.7134032065163,12.637118067208,11.3370204973216,11.1990162694243,12.0998889285097,12.073246209603,7.10288220882176,12.3581743599734,14.0285567914435,11.3889617399207,10.145961684683,9.00308294973317,11.0005157242036,11.3814900478873,15.9878769880285,11.2287172053796,9.23945532407683,8.03410994689142,6.17655973534643,6.95603506861264
|phase1_expression=12.0111635328595,8.37540978334467,5.0049916332849,19.3577095236371,23.041203577532,10.9121526742728,10.9797941079897,5.4231795845462,4.92760527530834,5.14941957908386,3.4243593645101,4.94587385771086,7.19043065711064,6.55653018142481,1.66554880907831,3.84703008040669,1.39912375625629,2.36596624018678,1.91960207048034,1.27316895539409,9.69493507722195,5.06383851124515,3.6567970479451,4.15980299262857,3.67054849707472,7.46501553349526,6.8921919385452,9.26526300549323,8.17100703662408,7.56090389279792,6.20845429834853,1.90509202037889,4.92051830067656,0,19.0642069035841,18.4520456347927,18.1710727073509,3.76678467663217,2.3440060335714,1.57057123192139,4.1176204162171,2.04913645487534,5.34061388334269,5.66535680890098,6.2853697356099,8.81024410376071,6.25913075478431,16.7879370412944,16.9158360705543,16.9154012194627,8.25919887589639,12.9377307928474,2.01339127269284,7.97898356212479,6.38578218370682,3.34437266846731,2.57880095944881,4.12537673821954,48.7582670671631,41.2612963832186,45.6358610524449,9.14880236586657,4.4464739805557,3.1496490104849,1.97773272513395,3.5524005747305,11.6844043102178,23.0530983192933,24.8855069540346,33.616478644591,28.604194743788,19.4242669394586,21.4242484723065,28.0503930202245,29.9037869576897,19.3035945188104,8.8092704799511,15.3224805702225,15.3606533256243,49.5892441865529,50.3182039813253,34.3802824567462,14.5175159480718,15.757353080887,15.279824777681,17.9723437138937,18.9354335462807,33.9246991402047,4.69502398665741,3.47629176491213,18.5513272769074,10.3250865237766,5.439770669662,4.85732872474035,10.3964226791627,6.2723764193627,6.31999890592883,4.26075806445144,4.41636207824877,7.0667914902068,12.8167511996779,5.13305909657271,7.64415719119937,14.2213340630666,5.62876706629157,5.82727690592727,7.58286667522175,6.39429726426736,4.91981978929626,9.05497048295431,7.45986905094384,8.22056791442781,5.76538743140146,6.78251882486802,6.58496759959947,7.1629957057915,3.21353458054686,7.22996784599558,1.76922110389975,5.01477234836968,3.75430581382669,2.90925151881133,11.1835056730873,16.6885054296582,14.6612694769419,12.0064815948038,0.958520996047362,1.79970819298022,1.65191295194984,18.4242486467932,10.5225138648284,25.8847965352501,12.6891753740362,16.1100738118108,13.9217989854905,17.8465389374533,6.61955865027056,6.22034853050465,3.53811861807145,20.8337437327609,12.8819238533077,13.104419952708,13.1445354757905,14.7690721479001,12.3826428455417,9.48041530107888,13.2119431629218,10.6068382002996,9.48499168904506,13.2374256117473,10.7330185740009,7.89104636739269,11.9560317167007,13.5818344943645,9.67176041117334,10.5488161413801,0,2.05878325691772,0.852490498186778,5.79952163099405,7.73935997937617,6.12211008967451,5.20838418287463,4.52557733019029,6.47921874126989,5.8133486187602,5.633741429392,3.85325629811659,6.41783414662574,5.08919138645195,5.6748166682099,3.07019973593198,7.24515380460467,3.89198614405078,11.3556572224629,25.9319623195797,11.5646574044329,13.4869788998408,7.89166526980366,6.73486348395272,4.51036114627327,4.23535401709019,3.11329261382818,3.80451252225118,9.01605216934572,1.31759163779209,3.77002813200404,3.58121649674071,5.26403035221624,8.98819408654222,14.2651112917298,13.541606581297,10.4317345524195,14.1668155636064,12.3978509240388,7.94240178596726,9.69762435838129,9.8190147846446,12.6473074248515,9.29943932271494,10.3619160375307,9.13139013021324,6.22550516883013,3.50374722003798,3.93117990226406,2.02375901146368,1.82574109249653,1.92941727801933,2.5462585178142,3.45235364940973,2.10775794807546,2.74561413188081,4.31304619582064,7.07067800570156,4.05648975048929,5.05157755894223,7.17589654087649,10.1313139486307,12.0089573608293,9.66406200029472,8.96307370431142,9.84521497496091,13.3773441524446,13.2329943379034,14.2826184531608,18.9279638422065,16.7093252752562,10.85176979279,17.6994793209811,17.0417847304368,11.3972088031491,16.6346417368738,1.50791283939272,0,14.2611639175521,11.5893433447988,12.5229460190478,15.7063660033552,4.91804836130026,13.3809591418318,10.0962630213202,10.5418460960092,9.69405289797595,7.88597033243422,7.79795359288379,7.35998980050964,4.85772842009873,10.5212108848072,9.88219444866309,11.2462460747632,10.5035663054119,10.6839362200353,9.12166972380026,13.0326397148303,14.6019652173959,11.4106898992841,9.06970670894253,6.97838795096823,9.44966057218473,7.37844355065426,5.68542244970086,8.36127577798263,7.84294232446387,10.4292130118819,15.8127912862498,12.3762651897824,11.9153862013826,12.2441543941291,17.7221396782374,16.5039516974326,12.7684968222437,17.658512942605,14.1512157717824,13.700922710157,2.58138878870081,3.38931313382112,10.5853631066382,10.8824926941377,10.6566521619298,9.58975506357678,9.78853220825719,10.3408766839389,8.45294426226567,11.6817940266621,3.41741761595705,8.2554747185289,4.44466865687308,2.26042148405629,3.41735569302563,2.97411625168479,1.86976272993241,3.07893195112048,2.9021994498929,4.77335309007557,9.64824780422463,9.14937602070819,9.07244862903131,13.1725626489115,13.7568415160092,12.4075198674035,6.4469695465762,12.5642852152334,15.6834117683069,4.34937519160848,2.81846469342095,8.37292657846281,12.0784698033681,10.1114617938905,8.26622870257479,7.60302564708502,7.62822051197401,12.2392121753313,15.4143236305795,7.9722759872582,6.91272015018877,6.32022241256356,9.12263468805739,9.55211901632893,7.14564526377873,5.19177417435696,7.54989148168807,5.4087952283986,5.1691334511102,5.25025539730368,7.08723301891499,6.04957110821043,5.55509920216589,5.8689223400601,8.53201385925453,12.2434407152214,3.10780334723691,4.30626511725483,3.52557694364565,9.65947970160952,10.5102186252662,10.6227942075014,16.7207335681671,11.034586288778,11.2950368523413,9.20650473014354,12.6037012956667,12.0297227640581,6.85082519770642,13.5970901530146,10.8003600037089,10.3573876741571,11.7817026335893,13.9795284172991,13.1809931431904,15.1629451892392,14.6830900948555,16.0450433265074,9.4325923182592,8.45680138870065,10.8900896622791,10.3017528619447,8.98573786857083,9.34979683526051,8.87177549615839,9.61994341068989,10.5814903440967,9.85987347034987,10.6255617567885,11.4310485907938,11.5884325944855,11.5745532278223,9.06588981767275,9.86232764900462,8.9146005620208,11.7134032065163,12.637118067208,11.3370204973216,11.1990162694243,12.0998889285097,12.073246209603,7.10288220882176,12.3581743599734,14.0285567914435,11.3889617399207,10.145961684683,9.00308294973317,11.0005157242036,11.3814900478873,15.9878769880285,11.2287172053796,9.23945532407683,8.03410994689142,6.17655973534643,6.95603506861264
|short_description=p1@Gfod2
}}
}}

Latest revision as of 07:40, 27 September 2015

Short description:p1@Gfod2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gfod2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000135959, ENSMUST00000155038, NM_027469, uc009neb.1_5end
EntrezGene:Gfod2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gfod2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.91
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I29.27
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.06
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.79
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C348.76
Mouse Granule cells, donor2.CNhs12357.11731-123E341.26
Mouse Granule cells, donor3.CNhs12108.11636-122C745.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E823.05
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.92
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D79.05
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F125.88
cortex, adult.CNhs10473.12-14D512.69
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G420.83
eyeball, embryo E12.CNhs11016.345-16C612.88
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C913.14
eyeball, embryo E17.CNhs11023.1261-18D414.77
eyeball, neonate N00.CNhs11207.633-15C612.38
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G813.21
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H213.24
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G125.93
intestinal mucosa, adult.CNhs10506.860-29I311.56
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A55.26
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G113.54
kidney, embryo E14.CNhs10606.411-4I910.43
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G79.82
kidney, neonate N10.CNhs11206.758-6D512.65
kidney, neonate N20.CNhs11113.832-19I19.30
kidney, neonate N25.CNhs11122.1353-25F310.36
kidney, neonate N30.CNhs11203.1385-42H19.13
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B112.01
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F88.96
lung, embryo E15.CNhs11020.432-17C59.85
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A613.23
lung, embryo E18.CNhs10583.1287-20I614.28
lung, neonate N00.CNhs11224.640-42C618.93
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E617.70
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C711.40
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C212.52
medulla oblongata, neonate N30.CNhs11200.1396-42A315.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C717.72
pituitary gland, embryo E14.CNhs11037.398-44A516.50
pituitary gland, embryo E15.CNhs10592.427-16B912.77
pituitary gland, embryo E16.CNhs11036.449-43F617.66
pituitary gland, embryo E17.CNhs11039.1265-44F514.15
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H39.59
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D49.07
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C613.76
stomach, neonate N03.CNhs11193.1340-24B812.41
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I115.68
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C512.08
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I412.24
testis, neonate N10.CNhs11204.763-44D915.41
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I29.55
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D37.09
thymus, neonate N10.CNhs11194.748-24E46.05
thymus, neonate N20.CNhs11186.820-7A25.56
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G28.53
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D516.72
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I813.18
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H214.68
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I515.99
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C68.03
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.30e-1323
neuroblast (sensu Vertebrata)1.30e-1323
ectodermal cell1.06e-1044
neurectodermal cell1.06e-1044
neural cell1.92e-1043
neuron2.04e-1033
neuronal stem cell2.04e-1033
neuroblast2.04e-1033
electrically signaling cell2.04e-1033
embryonic cell1.06e-0770
electrically responsive cell5.50e-0739
electrically active cell5.50e-0739

Uber anatomy
Ontology termp-valuen
ecto-epithelium3.64e-2273
ectoderm-derived structure1.87e-2195
ectoderm1.87e-2195
presumptive ectoderm1.87e-2195
neurectoderm2.80e-2164
neural plate2.80e-2164
presumptive neural plate2.80e-2164
central nervous system1.19e-2073
regional part of nervous system1.19e-1954
neural tube3.30e-1952
neural rod3.30e-1952
future spinal cord3.30e-1952
neural keel3.30e-1952
nervous system4.42e-1975
pre-chordal neural plate1.07e-1649
brain4.57e-1647
future brain4.57e-1647
regional part of brain5.32e-1646
anterior neural tube1.51e-1440
regional part of forebrain5.38e-1439
forebrain5.38e-1439
future forebrain5.38e-1439
gray matter2.74e-1334
brain grey matter2.12e-1029
regional part of telencephalon2.12e-1029
telencephalon2.12e-1029
structure with developmental contribution from neural crest2.32e-1092
cerebral cortex7.70e-0721
cerebral hemisphere7.70e-0721
pallium7.70e-0721
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