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{{f5samples
{{f5samples
|id=FF:10096-102C6
|DRA_sample_Accession=CAGE@SAMD00005187
|name=testis, adult, pool2
|accession_numbers=CAGE;DRX008740;DRR009612;DRZ001037;DRZ002422;DRZ012387;DRZ013772
|sample_id=10096
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079
|rna_tube_id=102C6
|rna_box=102
|rna_position=C6
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=8101369A-16
|rna_catalog_number=Cat: 636643 Lot: 8101369A-16
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=14-64 years old adult
|sample_tissue=testis
|sample_donor(cell lot)=39 pool
|sample_sex=male
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=biological replicate
|profile_hcage=CNhs12998,LSID999,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000079,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000473,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003101,UBERON:0003133,UBERON:0003135,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0007023,UBERON:0009117,UBERON:0009196
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010026
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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89029308..89029318,+!p3@ZC3H14!1.14!21.44!ZC3H14;;chr20:50792507..50792525,-!p12@ZFP64!1.14!12.86!ZFP64;;chr1:44584544..44584557,+!p4@KLF17!1.13!12.59!KLF17;;chr5:322711..322730,+!p6@AHRR!1.13!12.59!AHRR;;chr5:421030..421044,+!p8@AHRR!1.13!12.59!AHRR;;chr2:208423840..208423851,+!p10@CREB1!1.13!12.59!CREB1;;chr2:208423867..208423882,+!p11@CREB1!1.13!12.59!CREB1;;chr20:51588873..51588953,+!p1@TSHZ2!1.12!16.08!TSHZ2;;chr10:21822984..21823023,+!p5@MLLT10!1.12!15.54!MLLT10;;chr3:37217544..37217586,-!p6@LRRFIP2!1.12!14.20!LRRFIP2;;chr11:65686702..65686715,+!p11@DRAP1!1.12!13.67!DRAP1;;chr3:141144963..141144984,+!p44@ZBTB38!1.12!12.33!ZBTB38;;chr4:299227..299272,-!p1@ZNF732!1.12!12.33!ZNF732;;chr19:38308356..38308378,-!p4@ZNF573!1.12!12.06!ZNF573;;chr6:170863672..170863698,+!p6@TBP!1.12!12.06!TBP;;chr10:35415761..35415800,+!p7@CREM!1.11!30.28!CREM;;chr19:38042335..38042352,+!p4@ZNF540!1.11!11.79!ZNF540;;chr19:46801639..46801699,+!p1@HIF3A!1.11!11.79!HIF3A;;chr1:166958377..166958384,+!p5@MAEL!1.11!11.79!MAEL;;chr12:66218003..66218018,+!p9@HMGA2!1.10!14.20!HMGA2;;chr7:63505799..63505904,+!p1@ZNF727!1.10!11.52!ZNF727;;chr9:127269661..127269719,-!p1@NR5A1!1.10!11.52!NR5A1;;chr11:130184470..130184533,-!p2@ZBTB44!1.09!31.35!ZBTB44;;chr22:22863052..22863133,-!p1@ZNF280B!1.09!30.01!ZNF280B;;chr12:106994905..106994954,+!p6@RFX4!1.09!11.25!RFX4;;chr16:71523222..71523232,-!p2@ZNF23,p3@ZNF19!1.09!11.25!ZNF23;;chr6:19837592..19837621,+!p1@ID4!1.08!67.26!ID4;;chr19:44764031..44764072,+!p1@ZNF233!1.08!13.67!ZNF233;;chr13:45150896..45150927,-!p17@TSC22D1!1.08!10.99!TSC22D1;;chr9:114287433..114287513,+!p1@ZNF483!1.07!27.87!ZNF483;;chr9:127533519..127533573,-!p2@NR6A1!1.07!12.86!NR6A1;;chr17:53342311..53342400,+!p1@HLF!1.07!12.33!HLF;;chr6:134210243..134210257,+!p1@TCF21!1.07!10.72!TCF21;;chr6:170863699..170863716,+!p8@TBP!1.07!10.72!TBP;;chr1:247094628..247094663,-!p5@AHCTF1!1.07!10.72!AHCTF1;;chr9:127533582..127533615,-!p1@NR6A1!1.06!15.81!NR6A1;;chr6:43337180..43337244,-!p1@ZNF318!1.05!39.93!ZNF318;;chr5:158526917..158526932,-!p1@EBF1!1.05!25.72!EBF1;;chr19:19729477..19729542,-!p1@PBX4!1.05!21.97!PBX4;;chr19:12624655..12624680,-!p4@ZNF709!1.05!10.18!ZNF709;;chr5:121465234..121465263,+!p1@ZNF474!1.05!10.18!ZNF474;;chr12:23737534..23737550,-!p11@SOX5!1.05!10.18!SOX5;;chr9:130954135..130954168,-!p13@CIZ1!1.05!10.18!CIZ1;;chr19:58545454..58545498,+!p1@ZSCAN1!1.05!10.18!ZSCAN1;;chr1:43148059..43148108,+!p1@YBX1!1.04!644.45!YBX1;;chr19:38042240..38042309,+!p2@ZNF540!1.04!15.27!ZNF540;;chr21:47063590..47063597,+!p2@PCBP3!1.04!9.91!PCBP3;;chr12:53846612..53846624,+!p24@PCBP2!1.04!9.91!PCBP2;;chr10:135043702..135043729,+!p1@UTF1!1.03!9.65!UTF1;;chr19:42349075..42349085,+!p3@DMRTC2!1.03!9.65!DMRTC2;;chr19:9609272..9609297,-!p1@ZNF560!1.03!9.65!ZNF560;;chr1:197886461..197886558,+!p1@LHX9!1.03!9.65!LHX9;;chr20:30433396..30433414,-!p1@FOXS1!1.03!9.65!FOXS1;;chr6:134273279..134273294,+!p10@TBPL1!1.03!9.65!TBPL1;;chr2:208423853..208423865,+!p12@CREB1!1.03!9.65!CREB1;;chr17:17726892..17726903,-!p6@SREBF1!1.02!10.72!SREBF1;;chr19:58629742..58629787,-!p2@ZSCAN18!1.02!9.38!ZSCAN18;;chr20:44600983..44600997,-!p8@ZNF335!1.02!9.38!ZNF335;;chr12:8034651..8034657,+!p@chr12:8034651..8034657,+!1.02!9.38!NANOGP1;;chrX:70316005..70316034,+!p2@FOXO4!1.01!16.88!FOXO4;;chr14:89029323..89029329,+!p4@ZC3H14!1.00!11.52!ZC3H14;;chr9:138591319..138591340,-!p1@SOHLH1!1.00!9.11!SOHLH1;;chr10:60144869..60144887,+!p3@TFAM!1.00!9.11!TFAM;;chrX:66763856..66763896,+!p1@AR!0.99!12.86!AR;;chr17:74137321..74137337,-!p1@FOXJ1!0.99!8.84!FOXJ1;;chr22:41763452..41763466,+!p2@TEF!0.99!8.84!TEF;;chr19:50542543..50542548,+!p2@ZNF473!0.99!8.84!ZNF473;;chr1:26701003..26701014,-!p4@ZNF683!0.99!8.84!ZNF683;;chr1:43147829..43147842,+!p15@YBX1!0.99!8.84!YBX1;;chr6:27342388..27342399,+!p10@ZNF391!0.99!8.84!ZNF391;;chr8:116504458..116504481,-!p24@TRPS1!0.99!8.84!TRPS1;;chr19:50529247..50529296,+!p1@ZNF473!0.98!56.54!ZNF473;;chr19:23493420..23493428,-!p@chr19:23493420..23493428,-!0.98!8.57!ZNF725;;chr5:157079442..157079452,-!p5@SOX30!0.98!8.57!SOX30;;chr13:45151548..45151569,-!p9@TSC22D1!0.98!8.57!TSC22D1;;chr11:16430399..16430440,-!p27@SOX6!0.97!8.31!SOX6;;chr1:173837214..173837234,+!p6@ZBTB37!0.97!8.31!ZBTB37;;chrX:132352373..132352384,-!p1@TFDP3!0.97!8.31!TFDP3;;chr17:4889630..4889648,-!p14@CAMTA2!0.97!8.31!CAMTA2;;chr17:47439354..47439383,-!p3@ZNF652!0.96!13.13!ZNF652;;chr6:31515311..31515330,+!p3@NFKBIL1!0.96!11.79!NFKBIL1;;chr8:11534521..11534533,+!p4@GATA4!0.96!8.04!GATA4;;chr11:65554898..65554910,+!p3@OVOL1!0.96!8.04!OVOL1;;chr12:53846463..53846478,+!p25@PCBP2!0.96!8.04!PCBP2;;chr18:6414849..6414876,-!p2@L3MBTL4!0.96!8.04!L3MBTL4;;chr21:44394645..44394737,+!p1@PKNOX1!0.95!68.06!PKNOX1;;chr14:89029336..89029363,+!p2@ZC3H14!0.95!32.69!ZC3H14;;chr4:47916613..47916640,-!p3@NFXL1!0.95!24.38!NFXL1;;chr2:42795651..42795676,+!p3@MTA3!0.94!21.17!MTA3;;chr1:211432593..211432642,+!p6@RCOR3!0.94!11.25!RCOR3;;chr14:69260117..69260141,-!p4@ZFP36L1!0.94!10.45!ZFP36L1;;chr17:38497662..38497713,+!p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Line 66: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
|top_motifs=
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|is_obsolete=
|library_id=CNhs12998
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10096
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10096
|name=testis, adult, pool2
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|rna_box=102
|rna_catalog_number=Cat: 636643 Lot: 8101369A-16
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=8101369A-16
|rna_od260/230=
|rna_od260/280=
|rna_position=C6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=102C6
|rna_weight_ug=10
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=14-64 years old adult
|sample_disease=normal
|sample_donor(cell lot)=39 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.30846832598788e-221!GO:0043226;organelle;6.34707323549716e-185!GO:0043229;intracellular organelle;1.09905927354508e-184!GO:0043231;intracellular membrane-bound organelle;2.28659131056628e-176!GO:0043227;membrane-bound organelle;2.7435623835639e-176!GO:0005737;cytoplasm;2.52849328636658e-144!GO:0044422;organelle part;1.05371187835618e-123!GO:0044446;intracellular organelle part;1.53939585749375e-122!GO:0005634;nucleus;7.48263199381338e-89!GO:0044444;cytoplasmic part;1.15938774734031e-87!GO:0032991;macromolecular complex;5.87008869600028e-83!GO:0044238;primary metabolic process;6.85968154438637e-78!GO:0043170;macromolecule metabolic process;2.93446961052623e-77!GO:0044237;cellular metabolic process;4.51486414971627e-76!GO:0044428;nuclear part;1.61301969242077e-73!GO:0003723;RNA binding;1.21528497062987e-68!GO:0030529;ribonucleoprotein complex;1.00903064648937e-57!GO:0043233;organelle lumen;3.39397539151313e-57!GO:0031974;membrane-enclosed lumen;3.39397539151313e-57!GO:0016043;cellular component organization and biogenesis;7.42689191749822e-53!GO:0005515;protein binding;8.15748496605204e-50!GO:0043283;biopolymer metabolic process;7.13425417037426e-47!GO:0019538;protein metabolic process;3.24738943420713e-46!GO:0043234;protein complex;1.155678191196e-45!GO:0005739;mitochondrion;4.23115135472051e-44!GO:0044267;cellular protein metabolic process;4.5913972786915e-41!GO:0031981;nuclear lumen;4.99155786291098e-41!GO:0006996;organelle organization and biogenesis;9.59038718375619e-41!GO:0044260;cellular macromolecule metabolic process;1.22634079383305e-40!GO:0043228;non-membrane-bound organelle;1.40662629544332e-39!GO:0043232;intracellular non-membrane-bound organelle;1.40662629544332e-39!GO:0033036;macromolecule localization;8.25233028147699e-39!GO:0031967;organelle envelope;6.78191173643432e-38!GO:0031975;envelope;1.18470780397466e-37!GO:0016071;mRNA metabolic process;2.129377197951e-36!GO:0015031;protein transport;5.98980613180295e-36!GO:0006396;RNA processing;6.86508501343194e-36!GO:0046907;intracellular transport;3.40845366695957e-35!GO:0031090;organelle membrane;1.02589078918455e-33!GO:0008104;protein localization;1.05729836709866e-33!GO:0065003;macromolecular complex assembly;3.2881049073187e-33!GO:0022607;cellular component assembly;9.66957686670519e-33!GO:0045184;establishment of protein localization;1.18204267034149e-32!GO:0044429;mitochondrial part;1.18204267034149e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.91596994644024e-31!GO:0006259;DNA metabolic process;3.74048064174909e-31!GO:0008380;RNA splicing;1.31827434898611e-30!GO:0005840;ribosome;4.2029195752588e-30!GO:0010467;gene expression;2.23010579037719e-29!GO:0006397;mRNA processing;4.65118076329624e-29!GO:0007049;cell cycle;3.96667899147183e-28!GO:0006412;translation;4.68008148668326e-28!GO:0005654;nucleoplasm;3.55477897402056e-27!GO:0003676;nucleic acid binding;6.42782477715309e-27!GO:0005829;cytosol;6.98503561952813e-26!GO:0003735;structural constituent of ribosome;1.34760365284219e-25!GO:0051649;establishment of cellular localization;1.57463495527824e-25!GO:0051641;cellular localization;2.42126529140152e-25!GO:0006886;intracellular protein transport;6.83217097024102e-25!GO:0033279;ribosomal subunit;2.46878953125877e-24!GO:0000166;nucleotide binding;3.90147263808339e-24!GO:0006512;ubiquitin cycle;5.23062172511673e-24!GO:0005740;mitochondrial envelope;2.10134857317073e-23!GO:0016874;ligase activity;2.3012384056071e-23!GO:0031966;mitochondrial membrane;6.1561013428325e-23!GO:0022402;cell cycle process;3.3570854036256e-22!GO:0051276;chromosome organization and biogenesis;6.85881813939389e-22!GO:0044451;nucleoplasm part;7.1208085804899e-22!GO:0015630;microtubule cytoskeleton;2.51669626339637e-21!GO:0005681;spliceosome;3.3537917967893e-21!GO:0005694;chromosome;3.04862791633915e-20!GO:0006323;DNA packaging;6.18283667984972e-20!GO:0019866;organelle inner membrane;8.39332442580657e-20!GO:0048232;male gamete generation;1.81356271241474e-19!GO:0007283;spermatogenesis;1.81356271241474e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.07045092824938e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.12450137488802e-19!GO:0044265;cellular macromolecule catabolic process;6.62132289301469e-19!GO:0044427;chromosomal part;7.73037427378701e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;8.01792282114597e-19!GO:0005743;mitochondrial inner membrane;2.07896158829925e-18!GO:0006457;protein folding;7.64497880758903e-18!GO:0043412;biopolymer modification;1.65278602808949e-17!GO:0009059;macromolecule biosynthetic process;2.04969959798322e-17!GO:0006119;oxidative phosphorylation;3.24448252417644e-17!GO:0006511;ubiquitin-dependent protein catabolic process;6.65897760591878e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.65897760591878e-17!GO:0019941;modification-dependent protein catabolic process;1.02887607748491e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.02887607748491e-16!GO:0019953;sexual reproduction;1.40844441382998e-16!GO:0044257;cellular protein catabolic process;1.77839304878775e-16!GO:0006464;protein modification process;1.90042708785166e-16!GO:0007276;gamete generation;3.37743671485107e-16!GO:0009058;biosynthetic process;3.75007416402744e-16!GO:0043687;post-translational protein modification;4.84192632398892e-16!GO:0051082;unfolded protein binding;5.83268633143026e-16!GO:0005635;nuclear envelope;9.16557780455965e-16!GO:0031965;nuclear membrane;9.88468236149863e-16!GO:0022618;protein-RNA complex assembly;1.15151299347865e-15!GO:0008134;transcription factor binding;2.12251321482928e-15!GO:0022403;cell cycle phase;2.2277072124692e-15!GO:0044249;cellular biosynthetic process;3.89218927484509e-15!GO:0016070;RNA metabolic process;5.40614775924112e-15!GO:0032553;ribonucleotide binding;6.64623459853177e-15!GO:0032555;purine ribonucleotide binding;6.64623459853177e-15!GO:0044453;nuclear membrane part;8.14518327701293e-15!GO:0044445;cytosolic part;1.00689689785133e-14!GO:0005643;nuclear pore;1.05254901455438e-14!GO:0050657;nucleic acid transport;1.17507675101751e-14!GO:0051236;establishment of RNA localization;1.17507675101751e-14!GO:0050658;RNA transport;1.17507675101751e-14!GO:0016462;pyrophosphatase activity;1.41892370090769e-14!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.53532422542244e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.67087910037289e-14!GO:0006403;RNA localization;2.03440117571482e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.05433067250404e-14!GO:0032559;adenyl ribonucleotide binding;2.38176400234399e-14!GO:0005524;ATP binding;2.71184560535036e-14!GO:0017076;purine nucleotide binding;3.8325591660615e-14!GO:0044455;mitochondrial membrane part;4.03862979155032e-14!GO:0017111;nucleoside-triphosphatase activity;4.25006414631885e-14!GO:0015934;large ribosomal subunit;4.64989022643198e-14!GO:0000279;M phase;5.52735763185472e-14!GO:0016881;acid-amino acid ligase activity;8.68980602440292e-14!GO:0009057;macromolecule catabolic process;1.35401406586415e-13!GO:0000785;chromatin;1.4154965438455e-13!GO:0030554;adenyl nucleotide binding;2.58244026309384e-13!GO:0005730;nucleolus;2.72627587530499e-13!GO:0006913;nucleocytoplasmic transport;3.47347394744876e-13!GO:0048770;pigment granule;5.91291470553754e-13!GO:0042470;melanosome;5.91291470553754e-13!GO:0051301;cell division;6.21377036902443e-13!GO:0006605;protein targeting;7.32081932743657e-13!GO:0051028;mRNA transport;1.0192014935023e-12!GO:0051169;nuclear transport;1.12371742336706e-12!GO:0004386;helicase activity;1.47266291871774e-12!GO:0019787;small conjugating protein ligase activity;2.03694225945644e-12!GO:0016604;nuclear body;3.58578389093427e-12!GO:0000278;mitotic cell cycle;3.87782205339227e-12!GO:0006974;response to DNA damage stimulus;4.03307325274238e-12!GO:0044248;cellular catabolic process;4.24390185630169e-12!GO:0065004;protein-DNA complex assembly;4.91357255096688e-12!GO:0043285;biopolymer catabolic process;4.91357255096688e-12!GO:0005746;mitochondrial respiratory chain;4.91357255096688e-12!GO:0012505;endomembrane system;5.20504372866274e-12!GO:0050136;NADH dehydrogenase (quinone) activity;6.02020309340016e-12!GO:0003954;NADH dehydrogenase activity;6.02020309340016e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.02020309340016e-12!GO:0008565;protein transporter activity;6.56705428701971e-12!GO:0006333;chromatin assembly or disassembly;8.47621398319764e-12!GO:0008639;small protein conjugating enzyme activity;9.49337022070844e-12!GO:0048193;Golgi vesicle transport;9.51744303853471e-12!GO:0008135;translation factor activity, nucleic acid binding;1.02446725740909e-11!GO:0004842;ubiquitin-protein ligase activity;1.18389874047354e-11!GO:0015935;small ribosomal subunit;2.00701702282398e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.1592993309766e-11!GO:0031980;mitochondrial lumen;2.21773179844193e-11!GO:0005759;mitochondrial matrix;2.21773179844193e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.85765265060531e-11!GO:0000375;RNA splicing, via transesterification reactions;2.85765265060531e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.85765265060531e-11!GO:0030163;protein catabolic process;3.35809757387074e-11!GO:0016887;ATPase activity;6.00503729375735e-11!GO:0008026;ATP-dependent helicase activity;6.26070889065894e-11!GO:0016607;nuclear speck;6.28061158462723e-11!GO:0046930;pore complex;6.34455501593153e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.45280323486528e-11!GO:0006281;DNA repair;8.3844359669455e-11!GO:0000502;proteasome complex (sensu Eukaryota);9.26183982278168e-11!GO:0016192;vesicle-mediated transport;1.8008106396092e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.27996861885582e-10!GO:0005874;microtubule;2.40353497276211e-10!GO:0003712;transcription cofactor activity;2.51734048543028e-10!GO:0042623;ATPase activity, coupled;2.85766002814954e-10!GO:0016568;chromatin modification;2.88085058808173e-10!GO:0005813;centrosome;2.89427948075201e-10!GO:0030964;NADH dehydrogenase complex (quinone);2.99690856856241e-10!GO:0045271;respiratory chain complex I;2.99690856856241e-10!GO:0005747;mitochondrial respiratory chain complex I;2.99690856856241e-10!GO:0006446;regulation of translational initiation;3.88577987489295e-10!GO:0042775;organelle ATP synthesis coupled electron transport;4.13688993188481e-10!GO:0042773;ATP synthesis coupled electron transport;4.13688993188481e-10!GO:0000087;M phase of mitotic cell cycle;4.36806193809937e-10!GO:0007067;mitosis;5.1545704355022e-10!GO:0005794;Golgi apparatus;8.25255577521779e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.14457859799926e-10!GO:0006413;translational initiation;1.24495456128116e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.36250451618616e-09!GO:0005815;microtubule organizing center;1.38208705671785e-09!GO:0031497;chromatin assembly;1.51262597366914e-09!GO:0065002;intracellular protein transport across a membrane;2.20288105699356e-09!GO:0006334;nucleosome assembly;2.4065302033859e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.80904323183584e-09!GO:0006461;protein complex assembly;6.54208770584761e-09!GO:0051186;cofactor metabolic process;1.24379984154041e-08!GO:0009719;response to endogenous stimulus;1.32406761354487e-08!GO:0006793;phosphorus metabolic process;1.58780178589866e-08!GO:0006796;phosphate metabolic process;1.58780178589866e-08!GO:0000786;nucleosome;1.65620676163605e-08!GO:0007010;cytoskeleton organization and biogenesis;2.84935361966192e-08!GO:0007017;microtubule-based process;4.56807782196246e-08!GO:0051168;nuclear export;5.29859591804162e-08!GO:0006260;DNA replication;5.56891521179852e-08!GO:0005761;mitochondrial ribosome;5.60119356896603e-08!GO:0000313;organellar ribosome;5.60119356896603e-08!GO:0051726;regulation of cell cycle;6.64292529038888e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.63325869167203e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.70135492808265e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.58087858384091e-08!GO:0007286;spermatid development;1.10928656879716e-07!GO:0000074;regulation of progression through cell cycle;1.16759289805163e-07!GO:0003743;translation initiation factor activity;1.52446513410368e-07!GO:0048515;spermatid differentiation;1.77950887434588e-07!GO:0006366;transcription from RNA polymerase II promoter;1.81431013987694e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.17500214517725e-07!GO:0017038;protein import;2.59656656950649e-07!GO:0005783;endoplasmic reticulum;3.65581985689191e-07!GO:0032446;protein modification by small protein conjugation;3.75802816925672e-07!GO:0003724;RNA helicase activity;4.27018014692764e-07!GO:0005875;microtubule associated complex;4.68298931709463e-07!GO:0006732;coenzyme metabolic process;4.91961509048846e-07!GO:0005819;spindle;5.34982379661334e-07!GO:0016310;phosphorylation;5.93698848093722e-07!GO:0031072;heat shock protein binding;7.44736196088497e-07!GO:0000151;ubiquitin ligase complex;7.45525109126113e-07!GO:0005768;endosome;9.09593755069775e-07!GO:0030532;small nuclear ribonucleoprotein complex;9.14245066375151e-07!GO:0005667;transcription factor complex;9.44244459154878e-07!GO:0031988;membrane-bound vesicle;1.00639371347059e-06!GO:0048475;coated membrane;1.01050361843952e-06!GO:0030117;membrane coat;1.01050361843952e-06!GO:0016567;protein ubiquitination;1.01926163275022e-06!GO:0009056;catabolic process;1.20231908135913e-06!GO:0015986;ATP synthesis coupled proton transport;1.23123624738983e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.23123624738983e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.23399939304756e-06!GO:0051246;regulation of protein metabolic process;1.40027447061949e-06!GO:0009259;ribonucleotide metabolic process;1.44069377719284e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.58187726863637e-06!GO:0043566;structure-specific DNA binding;1.80674687398154e-06!GO:0009060;aerobic respiration;1.80674687398154e-06!GO:0003713;transcription coactivator activity;1.97273005430703e-06!GO:0008654;phospholipid biosynthetic process;3.21682305133626e-06!GO:0045333;cellular respiration;3.23291344989286e-06!GO:0009055;electron carrier activity;3.32928547108865e-06!GO:0003697;single-stranded DNA binding;3.60968174098985e-06!GO:0008186;RNA-dependent ATPase activity;4.69008228072328e-06!GO:0031982;vesicle;4.69228057811326e-06!GO:0019829;cation-transporting ATPase activity;4.84718151020828e-06!GO:0000245;spliceosome assembly;4.88060735272081e-06!GO:0004674;protein serine/threonine kinase activity;4.95530267461211e-06!GO:0009260;ribonucleotide biosynthetic process;5.82830867759882e-06!GO:0045786;negative regulation of progression through cell cycle;6.00887901989322e-06!GO:0006163;purine nucleotide metabolic process;6.84776649319296e-06!GO:0009150;purine ribonucleotide metabolic process;6.93814519124679e-06!GO:0031410;cytoplasmic vesicle;7.01137931467865e-06!GO:0009199;ribonucleoside triphosphate metabolic process;7.49313385905183e-06!GO:0030120;vesicle coat;7.94058357195806e-06!GO:0030662;coated vesicle membrane;7.94058357195806e-06!GO:0015631;tubulin binding;8.09855875911059e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.5768729269988e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.5768729269988e-06!GO:0016740;transferase activity;8.9891996523985e-06!GO:0000226;microtubule cytoskeleton organization and biogenesis;1.03236922074662e-05!GO:0003729;mRNA binding;1.06560300976022e-05!GO:0044440;endosomal part;1.09844846909913e-05!GO:0010008;endosome membrane;1.09844846909913e-05!GO:0044432;endoplasmic reticulum part;1.09844846909913e-05!GO:0009141;nucleoside triphosphate metabolic process;1.175375459652e-05!GO:0006405;RNA export from nucleus;1.18559604469287e-05!GO:0051170;nuclear import;1.28610605660248e-05!GO:0005773;vacuole;1.47995385183132e-05!GO:0042254;ribosome biogenesis and assembly;1.5189171177231e-05!GO:0004004;ATP-dependent RNA helicase activity;1.59019942648398e-05!GO:0005793;ER-Golgi intermediate compartment;1.59187826707745e-05!GO:0046034;ATP metabolic process;1.611392244083e-05!GO:0006606;protein import into nucleus;1.64446719320133e-05!GO:0005741;mitochondrial outer membrane;1.70039623961888e-05!GO:0006164;purine nucleotide biosynthetic process;2.00047674544476e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.00047674544476e-05!GO:0031968;organelle outer membrane;2.07081504738833e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.24825105015001e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.24825105015001e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.56911364190737e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.56911364190737e-05!GO:0006099;tricarboxylic acid cycle;2.83312856834007e-05!GO:0046356;acetyl-CoA catabolic process;2.83312856834007e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.87707881261095e-05!GO:0019867;outer membrane;3.10089674367923e-05!GO:0043623;cellular protein complex assembly;3.31173906644329e-05!GO:0006754;ATP biosynthetic process;4.20039972830322e-05!GO:0006753;nucleoside phosphate metabolic process;4.20039972830322e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.49520689160357e-05!GO:0004812;aminoacyl-tRNA ligase activity;4.49520689160357e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.49520689160357e-05!GO:0000323;lytic vacuole;4.84588584286161e-05!GO:0005764;lysosome;4.84588584286161e-05!GO:0000059;protein import into nucleus, docking;4.9281259564958e-05!GO:0016563;transcription activator activity;5.58495029175395e-05!GO:0006007;glucose catabolic process;6.9309230815415e-05!GO:0016779;nucleotidyltransferase activity;7.48805355554472e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.55167780689375e-05!GO:0051427;hormone receptor binding;7.90749005759206e-05!GO:0016469;proton-transporting two-sector ATPase complex;8.10838342300344e-05!GO:0030286;dynein complex;8.13179464627812e-05!GO:0043038;amino acid activation;9.98423525588845e-05!GO:0006418;tRNA aminoacylation for protein translation;9.98423525588845e-05!GO:0043039;tRNA aminoacylation;9.98423525588845e-05!GO:0045045;secretory pathway;0.000110159285381385!GO:0031324;negative regulation of cellular metabolic process;0.000118570473145304!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000127770645816113!GO:0006402;mRNA catabolic process;0.000129545896948264!GO:0006084;acetyl-CoA metabolic process;0.000139283641485502!GO:0035257;nuclear hormone receptor binding;0.000158994171964815!GO:0005669;transcription factor TFIID complex;0.000162938311631854!GO:0045259;proton-transporting ATP synthase complex;0.000163463825107395!GO:0009109;coenzyme catabolic process;0.000170189593548696!GO:0030036;actin cytoskeleton organization and biogenesis;0.000180205193222412!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000191939745563204!GO:0051187;cofactor catabolic process;0.000195666914595498!GO:0006613;cotranslational protein targeting to membrane;0.000195666914595498!GO:0030133;transport vesicle;0.000224687628472762!GO:0006406;mRNA export from nucleus;0.000240051547636778!GO:0009892;negative regulation of metabolic process;0.000291287755445768!GO:0046474;glycerophospholipid biosynthetic process;0.000297451195340519!GO:0005789;endoplasmic reticulum membrane;0.000299639984971512!GO:0005839;proteasome core complex (sensu Eukaryota);0.000368239484086871!GO:0016363;nuclear matrix;0.000372762079852974!GO:0019222;regulation of metabolic process;0.000389890306377185!GO:0016301;kinase activity;0.000394895080025242!GO:0005770;late endosome;0.000395232522863221!GO:0048523;negative regulation of cellular process;0.000412494296349062!GO:0006399;tRNA metabolic process;0.000463193408838187!GO:0005048;signal sequence binding;0.000494593585774627!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000518474058677306!GO:0048471;perinuclear region of cytoplasm;0.000535277482898121!GO:0006414;translational elongation;0.000657324212127375!GO:0046467;membrane lipid biosynthetic process;0.000713342295376813!GO:0008017;microtubule binding;0.00072324489439336!GO:0005856;cytoskeleton;0.000724593731564996!GO:0051321;meiotic cell cycle;0.000750275696274052!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000791110041413475!GO:0015002;heme-copper terminal oxidase activity;0.000791110041413475!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000791110041413475!GO:0004129;cytochrome-c oxidase activity;0.000791110041413475!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000800671322759487!GO:0005798;Golgi-associated vesicle;0.000811431332253929!GO:0005762;mitochondrial large ribosomal subunit;0.00081547946469208!GO:0000315;organellar large ribosomal subunit;0.00081547946469208!GO:0003714;transcription corepressor activity;0.0008428618829092!GO:0030029;actin filament-based process;0.0008428618829092!GO:0000922;spindle pole;0.000878085533247262!GO:0016481;negative regulation of transcription;0.000910373296298819!GO:0045454;cell redox homeostasis;0.000918156602118769!GO:0016564;transcription repressor activity;0.000924965735453649!GO:0030118;clathrin coat;0.000928489501804855!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00095366729221185!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00100145329539027!GO:0051252;regulation of RNA metabolic process;0.00106560802650539!GO:0044431;Golgi apparatus part;0.00106560802650539!GO:0051188;cofactor biosynthetic process;0.00116555788249273!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00118003319233097!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00118694096702125!GO:0008092;cytoskeletal protein binding;0.00121034498927555!GO:0031252;leading edge;0.00122931793222755!GO:0007059;chromosome segregation;0.00124895796891166!GO:0006364;rRNA processing;0.00126022894214416!GO:0006650;glycerophospholipid metabolic process;0.0012616550096207!GO:0044454;nuclear chromosome part;0.00129052133585603!GO:0050794;regulation of cellular process;0.00132950531701849!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00138851977977397!GO:0007051;spindle organization and biogenesis;0.0013964116723351!GO:0006352;transcription initiation;0.00150263775461864!GO:0031123;RNA 3'-end processing;0.00160007539774164!GO:0008250;oligosaccharyl transferase complex;0.00161358905693961!GO:0004298;threonine endopeptidase activity;0.00161474962394639!GO:0006338;chromatin remodeling;0.00163129785958327!GO:0016126;sterol biosynthetic process;0.00163297529158612!GO:0030518;steroid hormone receptor signaling pathway;0.00164327766334962!GO:0043488;regulation of mRNA stability;0.00170403000678171!GO:0043487;regulation of RNA stability;0.00170403000678171!GO:0005769;early endosome;0.00176844160446896!GO:0009108;coenzyme biosynthetic process;0.00181036170077987!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00185333056399778!GO:0006612;protein targeting to membrane;0.0018602971244753!GO:0006096;glycolysis;0.0019101986882736!GO:0006401;RNA catabolic process;0.00199005927076808!GO:0006261;DNA-dependent DNA replication;0.0020833526222254!GO:0019843;rRNA binding;0.00213701866896608!GO:0006891;intra-Golgi vesicle-mediated transport;0.00222310743419525!GO:0051789;response to protein stimulus;0.00222310743419525!GO:0006986;response to unfolded protein;0.00222310743419525!GO:0022890;inorganic cation transmembrane transporter activity;0.00225444977731899!GO:0016072;rRNA metabolic process;0.00227540000848019!GO:0031124;mRNA 3'-end processing;0.00248618105493422!GO:0008139;nuclear localization sequence binding;0.00249540824792107!GO:0003690;double-stranded DNA binding;0.0025644604716436!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.00257877553594198!GO:0051327;M phase of meiotic cell cycle;0.00274330927974076!GO:0007126;meiosis;0.00274330927974076!GO:0006752;group transfer coenzyme metabolic process;0.00282157610547116!GO:0003924;GTPase activity;0.00286832691061039!GO:0019899;enzyme binding;0.0029923903423621!GO:0000123;histone acetyltransferase complex;0.00330984821771557!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00330984821771557!GO:0007005;mitochondrion organization and biogenesis;0.00331546534484008!GO:0000775;chromosome, pericentric region;0.00334120697169995!GO:0031901;early endosome membrane;0.00337457094511133!GO:0046489;phosphoinositide biosynthetic process;0.0034179255367094!GO:0006607;NLS-bearing substrate import into nucleus;0.0034179255367094!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00348682508224381!GO:0051087;chaperone binding;0.00349331728058812!GO:0008610;lipid biosynthetic process;0.00350228762817707!GO:0004576;oligosaccharyl transferase activity;0.00357167002999339!GO:0008287;protein serine/threonine phosphatase complex;0.0035776068990452!GO:0015980;energy derivation by oxidation of organic compounds;0.00406900816332456!GO:0035258;steroid hormone receptor binding;0.00408962519168636!GO:0016787;hydrolase activity;0.00409174926972329!GO:0006611;protein export from nucleus;0.00411476103143127!GO:0003702;RNA polymerase II transcription factor activity;0.00413560394354072!GO:0051329;interphase of mitotic cell cycle;0.00413592982748209!GO:0003899;DNA-directed RNA polymerase activity;0.00431358551317711!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00451445338323166!GO:0004667;prostaglandin-D synthase activity;0.00451445338323166!GO:0050802;circadian sleep/wake cycle, sleep;0.00451445338323166!GO:0022410;circadian sleep/wake cycle process;0.00451445338323166!GO:0042749;regulation of circadian sleep/wake cycle;0.00451445338323166!GO:0048487;beta-tubulin binding;0.00454975443243269!GO:0030132;clathrin coat of coated pit;0.00457042603808823!GO:0005876;spindle microtubule;0.0045870820728609!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00458999606888887!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00458999606888887!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00458999606888887!GO:0018196;peptidyl-asparagine modification;0.00475565453122698!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00475565453122698!GO:0046365;monosaccharide catabolic process;0.00493592801952793!GO:0045892;negative regulation of transcription, DNA-dependent;0.00498125861467202!GO:0016251;general RNA polymerase II transcription factor activity;0.00498325289836875!GO:0016859;cis-trans isomerase activity;0.00498325289836875!GO:0003777;microtubule motor activity;0.00500070823425512!GO:0019320;hexose catabolic process;0.00513313757492455!GO:0019783;small conjugating protein-specific protease activity;0.00529014105821815!GO:0003711;transcription elongation regulator activity;0.00541332532075077!GO:0030522;intracellular receptor-mediated signaling pathway;0.00542763910792703!GO:0006916;anti-apoptosis;0.00560942069382273!GO:0005684;U2-dependent spliceosome;0.00571478202249251!GO:0051920;peroxiredoxin activity;0.00608066185572593!GO:0005791;rough endoplasmic reticulum;0.00622965502599225!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00631906553801962!GO:0043189;H4/H2A histone acetyltransferase complex;0.00635871454819251!GO:0000228;nuclear chromosome;0.00657973423441788!GO:0032940;secretion by cell;0.00663146710336215!GO:0016311;dephosphorylation;0.00665066443657971!GO:0051325;interphase;0.00666078555213848!GO:0040029;regulation of gene expression, epigenetic;0.00666078555213848!GO:0043021;ribonucleoprotein binding;0.0067365771938895!GO:0006997;nuclear organization and biogenesis;0.00684475401479053!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00690729462802071!GO:0006383;transcription from RNA polymerase III promoter;0.0069231299488862!GO:0030384;phosphoinositide metabolic process;0.00713854948203957!GO:0008361;regulation of cell size;0.00714921485710459!GO:0007018;microtubule-based movement;0.00724030614351844!GO:0048519;negative regulation of biological process;0.00761955005880398!GO:0032508;DNA duplex unwinding;0.00766354972163323!GO:0032392;DNA geometric change;0.00766354972163323!GO:0016044;membrane organization and biogenesis;0.00789122411077727!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00790777071846619!GO:0009566;fertilization;0.00816728671110173!GO:0030521;androgen receptor signaling pathway;0.00823441470337626!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00826200221252206!GO:0004843;ubiquitin-specific protease activity;0.0086128706870915!GO:0030134;ER to Golgi transport vesicle;0.00862419177548556!GO:0030867;rough endoplasmic reticulum membrane;0.00886431238421359!GO:0006302;double-strand break repair;0.00909107935275857!GO:0033116;ER-Golgi intermediate compartment membrane;0.00909107935275857!GO:0003682;chromatin binding;0.00919136981020053!GO:0035042;fertilization, exchange of chromosomal proteins;0.00943284025583206!GO:0035041;sperm chromatin decondensation;0.00943284025583206!GO:0051128;regulation of cellular component organization and biogenesis;0.00950875971590478!GO:0046488;phosphatidylinositol metabolic process;0.00953051340904094!GO:0000776;kinetochore;0.00982238749488174!GO:0046164;alcohol catabolic process;0.00993078556210672!GO:0030658;transport vesicle membrane;0.010373366450985!GO:0006644;phospholipid metabolic process;0.0104651406400323!GO:0016049;cell growth;0.0104651406400323!GO:0005832;chaperonin-containing T-complex;0.0105201958853692!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0109210866615293!GO:0008073;ornithine decarboxylase inhibitor activity;0.011276578565517!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0112885531122887!GO:0003746;translation elongation factor activity;0.0113269931012473!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0117632274239685!GO:0030127;COPII vesicle coat;0.0122457580420813!GO:0012507;ER to Golgi transport vesicle membrane;0.0122457580420813!GO:0043069;negative regulation of programmed cell death;0.0126903937281745!GO:0030880;RNA polymerase complex;0.0127344151386259!GO:0007338;single fertilization;0.0128109050851549!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0128421509026545!GO:0005885;Arp2/3 protein complex;0.0129821607251205!GO:0006595;polyamine metabolic process;0.0131727001195251!GO:0005905;coated pit;0.0132942742199081!GO:0006643;membrane lipid metabolic process;0.0133255258934318!GO:0008143;poly(A) binding;0.0133255258934318!GO:0043631;RNA polyadenylation;0.0135556833135955!GO:0030663;COPI coated vesicle membrane;0.014010991592618!GO:0030126;COPI vesicle coat;0.014010991592618!GO:0004221;ubiquitin thiolesterase activity;0.0141393937249169!GO:0008494;translation activator activity;0.0142504652652417!GO:0031323;regulation of cellular metabolic process;0.0142708988665924!GO:0001669;acrosome;0.0151759553892426!GO:0006376;mRNA splice site selection;0.0153264358369724!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0153264358369724!GO:0030137;COPI-coated vesicle;0.0154031850903218!GO:0006350;transcription;0.0158042758044253!GO:0035267;NuA4 histone acetyltransferase complex;0.0159143291109833!GO:0000287;magnesium ion binding;0.0160045200720713!GO:0008022;protein C-terminus binding;0.0163446306268543!GO:0006695;cholesterol biosynthetic process;0.0165154512944758!GO:0017166;vinculin binding;0.0166205425620654!GO:0030041;actin filament polymerization;0.0166447410384235!GO:0004364;glutathione transferase activity;0.0166677964859729!GO:0043066;negative regulation of apoptosis;0.0170417028924497!GO:0031902;late endosome membrane;0.0171936556211794!GO:0009117;nucleotide metabolic process;0.0175463103605629!GO:0016615;malate dehydrogenase activity;0.0176963070089985!GO:0005525;GTP binding;0.0179195381707034!GO:0043087;regulation of GTPase activity;0.0179454890651089!GO:0016272;prefoldin complex;0.0182869434491624!GO:0050681;androgen receptor binding;0.0186784860348206!GO:0000314;organellar small ribosomal subunit;0.0188884043567246!GO:0005763;mitochondrial small ribosomal subunit;0.0188884043567246!GO:0003725;double-stranded RNA binding;0.0188884043567246!GO:0016458;gene silencing;0.0189027972901203!GO:0008234;cysteine-type peptidase activity;0.0189111687854514!GO:0044450;microtubule organizing center part;0.0189111687854514!GO:0048500;signal recognition particle;0.0191548902697494!GO:0000139;Golgi membrane;0.0192746902920821!GO:0008094;DNA-dependent ATPase activity;0.0195906300723946!GO:0016197;endosome transport;0.0202445170150182!GO:0016744;transferase activity, transferring aldehyde or ketonic groups;0.020286631404861!GO:0001558;regulation of cell growth;0.0205881074959044!GO:0005657;replication fork;0.0211794691085136!GO:0016791;phosphoric monoester hydrolase activity;0.0217184902421506!GO:0000793;condensed chromosome;0.0219366934690947!GO:0005637;nuclear inner membrane;0.0221016229947982!GO:0008154;actin polymerization and/or depolymerization;0.0228110414194797!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0236950390645538!GO:0000428;DNA-directed RNA polymerase complex;0.0236950390645538!GO:0007030;Golgi organization and biogenesis;0.0239925746401649!GO:0004721;phosphoprotein phosphatase activity;0.0242235503617178!GO:0051287;NAD binding;0.0246836755282842!GO:0043681;protein import into mitochondrion;0.0250278785668845!GO:0000082;G1/S transition of mitotic cell cycle;0.0254229902627736!GO:0009434;microtubule-based flagellum;0.0255530728232947!GO:0000118;histone deacetylase complex;0.0264829488693056!GO:0006378;mRNA polyadenylation;0.027187153250042!GO:0030119;AP-type membrane coat adaptor complex;0.0272239609279428!GO:0008144;drug binding;0.0273146191981017!GO:0006268;DNA unwinding during replication;0.0273390652129831!GO:0006661;phosphatidylinositol biosynthetic process;0.0275581904439165!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0275889859096437!GO:0016584;nucleosome positioning;0.0278775743296279!GO:0016853;isomerase activity;0.0288330448786806!GO:0000209;protein polyubiquitination;0.0289291679329401!GO:0012501;programmed cell death;0.0290284353243898!GO:0016790;thiolester hydrolase activity;0.0290363992507675!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0290363992507675!GO:0030027;lamellipodium;0.0292820430412774!GO:0007050;cell cycle arrest;0.0294155833408954!GO:0005868;cytoplasmic dynein complex;0.0295391354078907!GO:0003727;single-stranded RNA binding;0.0295391354078907!GO:0003684;damaged DNA binding;0.0301999767151623!GO:0008270;zinc ion binding;0.0304548941759924!GO:0000075;cell cycle checkpoint;0.030499449328803!GO:0008180;signalosome;0.0306208330321425!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0310494329873546!GO:0030705;cytoskeleton-dependent intracellular transport;0.031291463952488!GO:0030660;Golgi-associated vesicle membrane;0.0322259428751099!GO:0031461;cullin-RING ubiquitin ligase complex;0.032324986481222!GO:0031970;organelle envelope lumen;0.0326370272559828!GO:0043044;ATP-dependent chromatin remodeling;0.0328719887340874!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0328719887340874!GO:0006892;post-Golgi vesicle-mediated transport;0.0330475308940858!GO:0019208;phosphatase regulator activity;0.033161967014784!GO:0005788;endoplasmic reticulum lumen;0.033161967014784!GO:0051721;protein phosphatase 2A binding;0.0331815747982347!GO:0050789;regulation of biological process;0.0333983765240964!GO:0003678;DNA helicase activity;0.0341272593812244!GO:0006944;membrane fusion;0.0345357357677711!GO:0035303;regulation of dephosphorylation;0.0347060975247633!GO:0006915;apoptosis;0.0347744689709142!GO:0007098;centrosome cycle;0.0352121810065207!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0357430212616769!GO:0015399;primary active transmembrane transporter activity;0.0357430212616769!GO:0006108;malate metabolic process;0.0364571135747954!GO:0004722;protein serine/threonine phosphatase activity;0.0377863540889246!GO:0005784;translocon complex;0.0377948737242334!GO:0006310;DNA recombination;0.0379604024616717!GO:0030176;integral to endoplasmic reticulum membrane;0.0383067688022777!GO:0030433;ER-associated protein catabolic process;0.0403618978290353!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0403618978290353!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0405207503966519!GO:0045047;protein targeting to ER;0.0405207503966519!GO:0016581;NuRD complex;0.0406178205664559!GO:0000910;cytokinesis;0.0407432268208247!GO:0051540;metal cluster binding;0.0408913145767534!GO:0051536;iron-sulfur cluster binding;0.0408913145767534!GO:0008147;structural constituent of bone;0.0412627040784835!GO:0030320;cellular monovalent inorganic anion homeostasis;0.041266876804156!GO:0055083;monovalent inorganic anion homeostasis;0.041266876804156!GO:0055064;chloride ion homeostasis;0.041266876804156!GO:0030644;cellular chloride ion homeostasis;0.041266876804156!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0412903440441543!GO:0010468;regulation of gene expression;0.0412903440441543!GO:0009081;branched chain family amino acid metabolic process;0.0414525660211785!GO:0030131;clathrin adaptor complex;0.0415742207680482!GO:0043414;biopolymer methylation;0.0417054517738111!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0419086952338691!GO:0004802;transketolase activity;0.0420491388288154!GO:0031625;ubiquitin protein ligase binding;0.0422040568219986!GO:0000339;RNA cap binding;0.0425970291354177!GO:0008219;cell death;0.0425970291354177!GO:0016265;death;0.0425970291354177!GO:0051052;regulation of DNA metabolic process;0.0425970291354177!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0429231119255119!GO:0007289;spermatid nuclear differentiation;0.0430262490659163!GO:0051297;centrosome organization and biogenesis;0.0438516116223219!GO:0031023;microtubule organizing center organization and biogenesis;0.0438516116223219!GO:0043126;regulation of 1-phosphatidylinositol 4-kinase activity;0.0438516116223219!GO:0046813;virion attachment, binding of host cell surface receptor;0.0438516116223219!GO:0043128;positive regulation of 1-phosphatidylinositol 4-kinase activity;0.0438516116223219!GO:0019642;anaerobic glycolysis;0.0440953600102446!GO:0004459;L-lactate dehydrogenase activity;0.0440953600102446!GO:0007076;mitotic chromosome condensation;0.044397820247277!GO:0006818;hydrogen transport;0.0449982467485403!GO:0043666;regulation of phosphoprotein phosphatase activity;0.0452110127693434!GO:0005758;mitochondrial intermembrane space;0.0460411115155682!GO:0019318;hexose metabolic process;0.0467750507219709!GO:0043130;ubiquitin binding;0.0470707930707861!GO:0032182;small conjugating protein binding;0.0470707930707861!GO:0004672;protein kinase activity;0.0477315823305864!GO:0008536;Ran GTPase binding;0.0477315823305864!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0486414471387707!GO:0032318;regulation of Ras GTPase activity;0.0491658430747306!GO:0015992;proton transport;0.0498097779801146
|sample_id=10096
|sample_note=biological replicate
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=testis
|top_motifs=MYB:10.0864286341;JUN:7.30649851472;RFX1:5.94731829188;ZNF148:4.707496114;NRF1:3.97020896235;SOX17:3.57828104986;NFY{A,B,C}:3.23235705863;BREu{core}:2.78964234405;RFX2..5_RFXANK_RFXAP:2.72147418388;HLF:2.29781240706;GFI1:1.89937320879;ATF2:1.89676354268;ATF4:1.7758756737;ZNF143:1.77169046649;ELK1,4_GABP{A,B1}:1.64321891611;ZFP161:1.61256153861;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.58874724623;NR5A1,2:1.56057557209;FOXN1:1.45356052254;ZBTB16:1.45016916429;SP1:1.43539310045;CREB1:1.36700732239;TEF:1.28072957545;NFIX:1.22453493655;PPARG:1.19440725598;SOX5:1.1901004234;HIF1A:1.13794343925;PITX1..3:0.930040880311;ZIC1..3:0.900969718891;POU6F1:0.831542091063;RXR{A,B,G}:0.807805907362;MTE{core}:0.747665353271;YY1:0.741661855782;TFAP2{A,C}:0.724063823346;ESR1:0.690805263842;HIC1:0.624046777344;XCPE1{core}:0.604777807924;GFI1B:0.582558471684;E2F1..5:0.501103840175;HOXA9_MEIS1:0.461819016117;AR:0.417528926204;bHLH_family:0.380236275922;TFAP2B:0.296931447456;EGR1..3:0.289960552255;NFE2L1:0.282240759808;RREB1:0.26938269631;NKX2-1,4:0.235629426913;NKX3-1:0.23435118842;TFDP1:0.229729571608;ATF6:0.1958112042;PATZ1:0.134949568414;NKX6-1,2:0.125160394449;ZNF423:0.117444722147;HOX{A4,D4}:0.103759656261;EN1,2:0.0825188562409;SNAI1..3:0.080629191679;DMAP1_NCOR{1,2}_SMARC:0.0804570436801;PAX5:0.0792604330331;MTF1:0.0788652888092;IKZF2:0.0536691971517;FOXP1:0.0425025401189;SREBF1,2:0.0416577900706;MED-1{core}:0.0377036225339;RBPJ:0.0293857142075;STAT5{A,B}:0.0188868996803;POU3F1..4:0.0165582242773;GCM1,2:-0.00993599284746;ZBTB6:-0.0346166690073;GZF1:-0.0672392016831;SRF:-0.0853820187491;HSF1,2:-0.110458643952;MYBL2:-0.138850561575;REST:-0.152217204118;LHX3,4:-0.155307062468;SOX2:-0.1639874218;SOX{8,9,10}:-0.165681484707;ATF5_CREB3:-0.167831592503;ALX1:-0.195457471917;MYFfamily:-0.19915692245;PBX1:-0.203467507251;ZEB1:-0.230795066096;EVI1:-0.240199797242;NHLH1,2:-0.265962851489;TEAD1:-0.318253687815;TGIF1:-0.319441646253;PAX1,9:-0.352994749132;TBP:-0.356881354001;GTF2A1,2:-0.35952162664;POU2F1..3:-0.379934491344;HNF4A_NR2F1,2:-0.380064398906;HBP1_HMGB_SSRP1_UBTF:-0.385193744544;HNF1A:-0.392090196003;UFEwm:-0.426471942283;PAX8:-0.441680143903;LMO2:-0.482896540615;GTF2I:-0.502203148936;TOPORS:-0.523912494693;NR3C1:-0.528472682792;PAX3,7:-0.544845220536;RXRA_VDR{dimer}:-0.54529895043;AIRE:-0.58484550891;NANOG{mouse}:-0.594013681728;GATA6:-0.638513212743;FOX{D1,D2}:-0.674995526733;STAT1,3:-0.714482581742;ESRRA:-0.742025485681;HMX1:-0.762401854693;FOXD3:-0.768382131488;CUX2:-0.768403246714;MAZ:-0.770107117237;HOX{A6,A7,B6,B7}:-0.777772633312;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.799110882599;ONECUT1,2:-0.807302809542;TFAP4:-0.849854627687;MEF2{A,B,C,D}:-0.862937339679;PDX1:-0.863265561769;MZF1:-0.880408125739;HAND1,2:-0.930472312755;GLI1..3:-0.939449295799;AHR_ARNT_ARNT2:-0.97166797392;HOX{A5,B5}:-0.973299785583;TP53:-0.984571147066;SPIB:-0.998548781676;HES1:-0.999086558721;PRRX1,2:-1.00053572685;MYOD1:-1.01199299946;TFCP2:-1.04024509069;PAX2:-1.04111896929;SPI1:-1.07436548368;TBX4,5:-1.09989591045;TLX1..3_NFIC{dimer}:-1.10034397782;KLF4:-1.10176968209;GATA4:-1.11378482276;FOXM1:-1.12099419532;BPTF:-1.13118482382;DBP:-1.16476959584;IRF7:-1.1703812567;NFKB1_REL_RELA:-1.18721129475;CDX1,2,4:-1.19647811893;NKX2-3_NKX2-5:-1.22908653954;ADNP_IRX_SIX_ZHX:-1.24524236413;RUNX1..3:-1.2500382483;FOS_FOS{B,L1}_JUN{B,D}:-1.25114316637;EBF1:-1.2746834086;FOXO1,3,4:-1.29482734015;TLX2:-1.31336827889;IKZF1:-1.33353697998;FOXQ1:-1.34377985016;NKX3-2:-1.35668073041;NKX2-2,8:-1.35785401655;ETS1,2:-1.36277712851;NFE2:-1.37626661819;T:-1.40018365893;BACH2:-1.41117395696;ELF1,2,4:-1.42947871571;CDC5L:-1.43976354828;ALX4:-1.44044088474;FOX{F1,F2,J1}:-1.44897524059;FOXP3:-1.46297929845;FOSL2:-1.47413588838;TAL1_TCF{3,4,12}:-1.48604910378;IRF1,2:-1.50999376141;LEF1_TCF7_TCF7L1,2:-1.51853060084;RORA:-1.53610256939;XBP1:-1.61060678248;ZNF384:-1.6236676645;VSX1,2:-1.63798164625;SPZ1:-1.68002868737;NR6A1:-1.73600613659;EP300:-1.74639243884;FOXA2:-1.75377336565;SMAD1..7,9:-1.8147297016;NR1H4:-1.84876875708;NFIL3:-1.89712253523;CEBPA,B_DDIT3:-1.91736107783;NFE2L2:-1.96864965697;OCT4_SOX2{dimer}:-1.9907526461;POU1F1:-2.02841732661;PAX6:-2.08878518426;ZNF238:-2.10194572792;STAT2,4,6:-2.14512294725;PRDM1:-2.16486953249;MAFB:-2.17177872798;FOXL1:-2.17547190908;NFATC1..3:-2.19671917853;ARID5B:-2.28379208869;NANOG:-2.72959838955;POU5F1:-2.78517402996;HMGA1,2:-2.88254795919;CRX:-3.07822750668;PAX4:-3.15239800724;FOX{I1,J2}:-4.54855561992
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10096-102C6;search_select_hide=table117:FF:10096-102C6
}}
}}

Latest revision as of 12:21, 3 June 2020

Name:testis, adult, pool2
Species:Human (Homo sapiens)
Library ID:CNhs12998
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuetestis
dev stage14-64 years old adult
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number8101369A-16
catalog numberCat: 636643 Lot: 8101369A-16
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005187
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12998 CAGE DRX008740 DRR009612
Accession ID Hg19

Library idBAMCTSS
CNhs12998 DRZ001037 DRZ002422
Accession ID Hg38

Library idBAMCTSS
CNhs12998 DRZ012387 DRZ013772
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0.901
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.241
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.209
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.949
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.103
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.103
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0581
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.103
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.151
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.532
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.103
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0.103
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.015
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.17
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.103
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0.186
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.101
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0785
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0565
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.046
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.103
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.103
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0457
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0802
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.103
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.23
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.103
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.186
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.0544
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.103
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0583
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12998

Jaspar motifP-value
MA0002.29.91718e-4
MA0003.10.685
MA0004.10.687
MA0006.10.462
MA0007.10.739
MA0009.10.717
MA0014.10.602
MA0017.10.298
MA0018.21.74399e-5
MA0019.10.054
MA0024.10.0355
MA0025.10.902
MA0027.10.761
MA0028.10.0533
MA0029.10.0424
MA0030.10.877
MA0031.10.291
MA0035.20.0501
MA0038.10.00577
MA0039.20.0587
MA0040.10.604
MA0041.10.296
MA0042.10.865
MA0043.10.00669
MA0046.10.467
MA0047.20.1
MA0048.10.915
MA0050.10.00906
MA0051.10.00817
MA0052.10.689
MA0055.10.174
MA0057.10.939
MA0058.10.731
MA0059.10.514
MA0060.18.48263e-37
MA0061.15.68073e-4
MA0062.20.00402
MA0065.20.78
MA0066.10.341
MA0067.10.442
MA0068.10.0188
MA0069.10.832
MA0070.10.0836
MA0071.10.588
MA0072.10.236
MA0073.10.697
MA0074.10.379
MA0076.10.0098
MA0077.10.189
MA0078.10.0525
MA0079.20.184
MA0080.21.79759e-7
MA0081.10.131
MA0083.10.227
MA0084.10.821
MA0087.10.854
MA0088.10.714
MA0090.10.401
MA0091.10.327
MA0092.10.0745
MA0093.10.645
MA0099.21.71417e-11
MA0100.13.52351e-10
MA0101.10.0133
MA0102.20.0861
MA0103.10.715
MA0104.20.248
MA0105.12.66475e-6
MA0106.10.00474
MA0107.13.53774e-4
MA0108.20.0409
MA0111.10.547
MA0112.25.48458e-4
MA0113.10.274
MA0114.10.366
MA0115.10.0727
MA0116.10.00155
MA0117.10.781
MA0119.10.0389
MA0122.10.661
MA0124.10.953
MA0125.10.86
MA0131.10.0606
MA0135.10.149
MA0136.10.00236
MA0137.20.104
MA0138.20.215
MA0139.10.47
MA0140.19.81642e-4
MA0141.10.773
MA0142.10.174
MA0143.10.308
MA0144.10.0205
MA0145.10.13
MA0146.10.869
MA0147.10.383
MA0148.10.115
MA0149.10.552
MA0150.19.17666e-4
MA0152.10.523
MA0153.10.858
MA0154.15.49567e-4
MA0155.10.666
MA0156.10.09
MA0157.10.366
MA0159.10.281
MA0160.10.684
MA0162.10.245
MA0163.10.0559
MA0164.10.778
MA0258.10.0625
MA0259.10.116



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12998

Novel motifP-value
10.178
100.355
1000.565
1010.529
1020.482
1030.419
1040.59
1050.233
1061.50768e-6
1070.00332
1080.282
1090.861
110.132
1100.381
1110.978
1120.0248
1130.766
1140.329
1150.793
1160.374
1170.599
1180.505
1190.168
120.887
1200.0753
1210.453
1220.892
1230.313
1240.368
1250.662
1260.659
1270.264
1280.00178
1290.561
130.689
1300.402
1310.257
1320.631
1330.968
1340.802
1350.128
1360.0305
1370.227
1380.116
1390.399
140.421
1400.151
1410.162
1420.919
1430.993
1440.949
1450.152
1460.644
1470.421
1480.137
1490.0707
150.362
1500.358
1510.172
1520.0533
1530.283
1540.211
1550.315
1560.597
1570.876
1580.0493
1590.43
160.334
1600.0346
1610.916
1620.818
1630.195
1640.00448
1650.358
1660.375
1670.812
1680.254
1690.0576
170.111
180.0775
190.35
20.115
200.325
210.548
220.314
230.00914
240.811
250.743
260.296
270.0967
280.823
290.969
30.0916
300.792
310.208
320.2
330.754
340.502
350.418
360.0896
370.119
380.501
390.713
40.0552
400.754
410.263
420.329
430.19
440.354
450.631
460.114
470.469
480.379
490.865
50.218
500.978
510.191
520.118
530.279
540.216
550.147
560.238
570.167
580.511
590.0469
60.747
600.0272
610.752
620.258
630.204
640.55
650.119
663.61844e-8
670.516
680.262
690.792
70.7
700.23
710.128
720.495
730.137
740.273
750.312
760.725
770.0759
780.0652
790.594
80.433
800.34
810.299
820.15
830.37
840.515
850.0273
860.362
870.385
880.699
890.118
90.335
900.101
910.182
920.0717
930.324
940.0133
950.854
960.42
970.866
980.681
990.271



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12998


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000473 (testis)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010026 (human testis - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)

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