FFCP PHASE1:Mm9::chr10:86955504..86955516,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:86955504..86955516,- | |||
|description=CAGE_peak_at_chr10:86955504..86955516,- | |description=CAGE_peak_at_chr10:86955504..86955516,- | ||
|id=chr10:86955504..86955516,- | |id=chr10:86955504..86955516,- | ||
|ontology_enrichment_celltype=CL:0002319!1.17e-17!43;CL:0000221!5.41e-17!44;CL:0000133!5.41e-17!44;CL:0000055!1.36e-13!50;CL:0000540!2.97e-13!33;CL:0000047!2.97e-13!33;CL:0000031!2.97e-13!33;CL:0000404!2.97e-13!33;CL:0000107!7.61e-11!9;CL:0000393!6.16e-10!39;CL:0000211!6.16e-10!39;CL:0002453!2.69e-07!8;CL:0002321!8.36e-07!70;CL:0000220!8.36e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.16e-35,9;CL:0002319,2.10e-33,43;CL:0000221,1.43e-32,44;CL:0000133,1.43e-32,44;CL:0000540,1.32e-20,33;CL:0000047,1.32e-20,33;CL:0000031,1.32e-20,33;CL:0000404,1.32e-20,33;CL:0002321,3.00e-19,70;CL:0002453,7.29e-18,8;CL:0000393,4.72e-17,39;CL:0000211,4.72e-17,39;CL:0000333,3.45e-14,10;CL:0000095,3.45e-14,10;CL:0000243,3.45e-14,10;CL:0000123,3.45e-14,10;CL:0000125,3.45e-14,10;CL:0000030,3.45e-14,10;CL:0000339,3.45e-14,10;CL:0000128,5.61e-11,6;CL:0000126,5.61e-11,6;CL:0000127,5.61e-11,6;CL:0000878,3.18e-09,2;CL:0000129,3.18e-09,2;CL:0002603,4.18e-09,2;CL:0002611,1.91e-08,2;CL:0000723,3.70e-08,91;CL:0000048,3.70e-08,91;CL:0000034,1.80e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.39e-26!73;UBERON:0005743!5.39e-26!73;UBERON:0000073!8.27e-25!75;UBERON:0001016!8.27e-25!75;UBERON:0004121!5.92e-24!102;UBERON:0000924!5.92e-24!102;UBERON:0006601!5.92e-24!102;UBERON:0002346!1.30e-17!71;UBERON:0003075!1.30e-17!71;UBERON:0007284!1.30e-17!71;UBERON:0007811!8.39e-14!86;UBERON:0000033!6.69e-13!63;UBERON:0001049!2.79e-12!52;UBERON:0005068!2.79e-12!52;UBERON:0006241!2.79e-12!52;UBERON:0007135!2.79e-12!52;UBERON:0003076!1.23e-11!12;UBERON:0003057!1.23e-11!12;UBERON:0000153!2.35e-11!94;UBERON:0002410!7.61e-11!9;UBERON:0000955!1.51e-09!50;UBERON:0006238!1.51e-09!50;UBERON:0002616!4.57e-09!49;UBERON:0003056!1.57e-08!49;UBERON:0000010!2.64e-08!11;UBERON:0002240!8.86e-07!6;UBERON:0005174!8.86e-07!6;UBERON:0001137!8.86e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,9.16e-35,9;UBERON:0000010,3.31e-28,11;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0000011,6.55e-13,3;UBERON:0000013,8.61e-13,3;UBERON:0010313,3.02e-12,3;UBERON:0002342,3.02e-12,3;UBERON:0002005,3.02e-12,3;UBERON:0005428,3.02e-12,3;UBERON:0005062,3.02e-12,3;UBERON:0001948,4.37e-12,5;UBERON:0002315,4.37e-12,5;UBERON:0003076,5.03e-11,12;UBERON:0003057,5.03e-11,12;UBERON:0002240,4.22e-10,6;UBERON:0005174,4.22e-10,6;UBERON:0001137,4.22e-10,6;UBERON:0002256,1.91e-08,2;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,10.247182349881,0.659058548203415,0,1.67983705950435,10.062679505548,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0.677689064138264,0,0,0,0,3.59520132622086,8.06858441175265,0.103689612308478,0,0,2.57085885963423,1.32521124570968,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.768032666281217,0.659431438650969,0.548925861614458,0,0.558365998002762,0,0,1.17851434189467,1.99320353118744,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.512454881139399,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,2.2085575359138,3.51394869866975,3.23135096599198,6.21318874676635,4.45597348164788,6.22768367735431,7.2865926301481,2.92255857911312,5.92931666919785,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,7.14923172082955,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0.302899349844443,0,0.302478555410522,0,0.0962118416403295,0.350630706544707,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,10.247182349881,0.659058548203415,0,1.67983705950435,10.062679505548,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0.677689064138264,0,0,0,0,3.59520132622086,8.06858441175265,0.103689612308478,0,0,2.57085885963423,1.32521124570968,0.122490799214954,0.191690942036473,0,0,0.383062014255563,0.768032666281217,0.659431438650969,0.548925861614458,0,0.558365998002762,0,0,1.17851434189467,1.99320353118744,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.898743836428936,0,0,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0,0,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.512454881139399,0.562210347358373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.481651769963376,0.35163505977661,0,0,2.2085575359138,3.51394869866975,3.23135096599198,6.21318874676635,4.45597348164788,6.22768367735431,7.2865926301481,2.92255857911312,5.92931666919785,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,7.14923172082955,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0.302899349844443,0,0.302478555410522,0,0.0962118416403295,0.350630706544707,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr10:86955504..86955516,- | |short_description=p@chr10:86955504..86955516,- | ||
}} | }} |
Latest revision as of 23:31, 4 August 2015
Short description: | p@chr10:86955504..86955516, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:86955504..86955516, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.16e-35 | 9 |
neural cell | 2.10e-33 | 43 |
ectodermal cell | 1.43e-32 | 44 |
neurectodermal cell | 1.43e-32 | 44 |
neuron | 1.32e-20 | 33 |
neuronal stem cell | 1.32e-20 | 33 |
neuroblast | 1.32e-20 | 33 |
electrically signaling cell | 1.32e-20 | 33 |
embryonic cell | 3.00e-19 | 70 |
oligodendrocyte precursor cell | 7.29e-18 | 8 |
electrically responsive cell | 4.72e-17 | 39 |
electrically active cell | 4.72e-17 | 39 |
migratory neural crest cell | 3.45e-14 | 10 |
neuron associated cell | 3.45e-14 | 10 |
glial cell (sensu Vertebrata) | 3.45e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 3.45e-14 | 10 |
glial cell | 3.45e-14 | 10 |
glioblast | 3.45e-14 | 10 |
glioblast (sensu Vertebrata) | 3.45e-14 | 10 |
oligodendrocyte | 5.61e-11 | 6 |
macroglial cell | 5.61e-11 | 6 |
astrocyte | 5.61e-11 | 6 |
central nervous system macrophage | 3.18e-09 | 2 |
microglial cell | 3.18e-09 | 2 |
astrocyte of the cerebellum | 4.18e-09 | 2 |
neuron of the dorsal spinal cord | 1.91e-08 | 2 |
somatic stem cell | 3.70e-08 | 91 |
multi fate stem cell | 3.70e-08 | 91 |
stem cell | 1.80e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 9.16e-35 | 9 |
peripheral nervous system | 3.31e-28 | 11 |
central nervous system | 5.02e-25 | 73 |
nervous system | 2.88e-24 | 75 |
ectoderm-derived structure | 1.98e-18 | 95 |
ectoderm | 1.98e-18 | 95 |
presumptive ectoderm | 1.98e-18 | 95 |
parasympathetic nervous system | 6.55e-13 | 3 |
sympathetic nervous system | 8.61e-13 | 3 |
neural crest-derived structure | 3.02e-12 | 3 |
neural crest | 3.02e-12 | 3 |
enteric nervous system | 3.02e-12 | 3 |
vagal neural crest | 3.02e-12 | 3 |
neural fold | 3.02e-12 | 3 |
regional part of spinal cord | 4.37e-12 | 5 |
gray matter of spinal cord | 4.37e-12 | 5 |
posterior neural tube | 5.03e-11 | 12 |
chordal neural plate | 5.03e-11 | 12 |
spinal cord | 4.22e-10 | 6 |
dorsal region element | 4.22e-10 | 6 |
dorsum | 4.22e-10 | 6 |
dorsal horn of spinal cord | 1.91e-08 | 2 |
organ system subdivision | 3.78e-07 | 194 |