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FFCP PHASE1:Mm9::chr11:51817722..51817813,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=213084
|EntrezGene=213084
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8BLF2,E9QPG3,B1AU43,B1AU42,F2Z3Z6
|UniProt=Q8BLF2,E9QPG3,B1AU43,B1AU42,F2Z3Z6
|association_with_transcript=0bp_to_ENSMUST00000063303,ENSMUST00000063321,ENSMUST00000109074,ENSMUST00000109077,ENSMUST00000109078,ENSMUST00000109079,ENSMUST00000109080,ENSMUST00000109081,ENSMUST00000109082,ENSMUST00000120374,ENSMUST00000121591,ENSMUST00000135076,ENSMUST00000143228,NM_001166653,NM_001166654,NM_001166655,NM_001166656,NM_001166657,NM_153785,uc007iuu.2,uc007iuv.2,uc007iuw.2,uc007iux.2,uc007iuy.2,uc007iuz.2,uc011xul.1_5end
|association_with_transcript=0bp_to_ENSMUST00000063303,ENSMUST00000063321,ENSMUST00000109074,ENSMUST00000109077,ENSMUST00000109078,ENSMUST00000109079,ENSMUST00000109080,ENSMUST00000109081,ENSMUST00000109082,ENSMUST00000120374,ENSMUST00000121591,ENSMUST00000135076,ENSMUST00000143228,NM_001166653,NM_001166654,NM_001166655,NM_001166656,NM_001166657,NM_153785,uc007iuu.2,uc007iuv.2,uc007iuw.2,uc007iux.2,uc007iuy.2,uc007iuz.2,uc011xul.1_5end
|cluster_id=chr11:51817722..51817813,+
|description=CAGE_peak_1_at_Cdkl3_5end
|description=CAGE_peak_1_at_Cdkl3_5end
|id=chr11:51817722..51817813,+
|id=chr11:51817722..51817813,+
|ontology_enrichment_celltype=CL:0000117!3.83e-11!23;CL:0000337!3.83e-11!23;CL:0000540!3.69e-08!33;CL:0000047!3.69e-08!33;CL:0000031!3.69e-08!33;CL:0000404!3.69e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.81e-11,23;CL:0000337,3.81e-11,23;CL:0000540,3.67e-08,33;CL:0000047,3.67e-08,33;CL:0000031,3.67e-08,33;CL:0000404,3.67e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.01e-16!94;UBERON:0007811!1.09e-16!86;UBERON:0001049!5.17e-16!52;UBERON:0005068!5.17e-16!52;UBERON:0006241!5.17e-16!52;UBERON:0007135!5.17e-16!52;UBERON:0000033!9.27e-15!63;UBERON:0001017!1.34e-14!73;UBERON:0005743!1.34e-14!73;UBERON:0000955!1.49e-14!50;UBERON:0006238!1.49e-14!50;UBERON:0000073!1.82e-14!75;UBERON:0001016!1.82e-14!75;UBERON:0002616!5.36e-14!49;UBERON:0003056!3.51e-13!49;UBERON:0002346!1.13e-12!71;UBERON:0003075!1.13e-12!71;UBERON:0007284!1.13e-12!71;UBERON:0002020!1.88e-12!34;UBERON:0003080!4.71e-12!40;UBERON:0002780!1.79e-11!39;UBERON:0001890!1.79e-11!39;UBERON:0006240!1.79e-11!39;UBERON:0004121!6.84e-11!102;UBERON:0000924!6.84e-11!102;UBERON:0006601!6.84e-11!102;UBERON:0002791!5.89e-10!29;UBERON:0003528!5.89e-10!29;UBERON:0001893!5.89e-10!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-16,54;UBERON:0002346,4.87e-16,64;UBERON:0003075,4.87e-16,64;UBERON:0007284,4.87e-16,64;UBERON:0001049,5.13e-16,52;UBERON:0005068,5.13e-16,52;UBERON:0006241,5.13e-16,52;UBERON:0007135,5.13e-16,52;UBERON:0010371,8.82e-15,73;UBERON:0001017,1.21e-14,73;UBERON:0001016,1.64e-14,75;UBERON:0000955,1.80e-13,47;UBERON:0006238,1.80e-13,47;UBERON:0004121,2.93e-13,95;UBERON:0000924,2.93e-13,95;UBERON:0006601,2.93e-13,95;UBERON:0003056,3.49e-13,49;UBERON:0002616,6.37e-13,46;UBERON:0002020,1.86e-12,34;UBERON:0003080,4.68e-12,40;UBERON:0002780,1.78e-11,39;UBERON:0001890,1.78e-11,39;UBERON:0006240,1.78e-11,39;UBERON:0003528,5.86e-10,29;UBERON:0002791,5.86e-10,29;UBERON:0001893,5.86e-10,29;UBERON:0010314,1.95e-09,92
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218863,2.29997125615916,2.40198820120795,3.37160865962052,4.21532624199213,2.87931536182433,2.46268449254406,1.24267862617385,669.667211156818,5.08356256549528,4.13646226142744,6.22243802700952,3.87479470433193,3.54807863530634,7.51086327332825,9.24451132392046,9.01790362061113,98.5663212970105,318.849216927457,5.68820017130721,2.8381530140623,4.00572732942826,2.98817892848929,5.01274747868948,5.36439657909415,7.09153152167816,7.08909730437971,8.6831146955407,9.22102360525498,8.16692099608408,6.82205165178267,5.8689223400601,7.83075244616512,2.49403421976732,2.66383144048878,2.78112955489375,2.01461539636894,4.63655025677257,3.37828455812128,5.31139710375069,2.78678892802786,1.00314420807073,12.4245405375755,7.82552902062201,5.72895513439397,7.56154002312225,8.90607275701835,9.82012066606611,10.1253375034771,6.75481804836331,7.70342095273148,5.69536342927002,6.01966615988225,8.37952234142165,7.0000778359195,5.34834777550247,5.8691685535835,7.72142735490059,8.22312892865976,6.59312183164461,7.06022261101994,6.31743029409494,7.35089969681695,7.35642731405697,5.15028291084353,7.17081706934536,7.69635284005218,6.66811167796303,6.95305955669133,7.7163688185482,6.59337441285291,7.50714492685426,2.74295401908332,6.92155644021416,7.62995807831427,8.43009216467505,6.39943786824248,7.78454392603424,8.41468675214754,4.99832451731901,6.51859746460137,6.17256498823512,9.13489639556141,6.69830480153832,4.50154147486658,8.52152626522813,6.94463799532109,8.74337022782811,3.97683734357194,7.95022899978704,7.46024495068489,5.95596831622692,4.17362104116759
|phase1_expression=7.20669811971573,1.39590163055744,1.36499771816861,1.51232105653415,0.500895729946347,1.6787927191189,1.63528848416868,5.03580961422147,2.53419699873,2.10658073689794,7.53359060192222,6.62108919661292,3.93761678841773,3.67165690159789,1.33243904726265,2.83465374345756,1.39912375625629,6.62470547252299,6.30726394586398,6.79023442876848,109.365671134276,1.98581902401771,1.82839852397255,1.11994695955385,0.91763712426868,0.57423196411502,1.29228598847722,0.646413698057667,0.570070258369122,1.00812051903972,1.33038306393183,3.17515336729816,0.61506478758457,15.8481681015439,0.577703239502549,0.997407872150954,2.24586291888606,7.95210098400125,4.6880120671428,6.80580867165938,14.7057872007754,6.83045484958446,5.82612423637384,3.52511090331616,3.34543873024398,5.13930906052708,6.25913075478431,1.74420125104357,1.09843091367236,3.4997381833371,3.63964696225943,0,5.03347818173209,1.45072428402269,2.01656279485478,1.28629718017973,2.86533439938757,1.54701627683233,10.7227724255587,10.5798195854407,13.9442908771359,2.37191172448392,0,1.7997994345628,0.988866362566974,1.4209602298922,2.09720077362883,2.68952813725088,8.50254820929517,8.50537411489651,7.36137364729837,8.2838785477103,9.718215801871,10.0442455356262,8.05101956553185,7.35375029288017,5.50579404996943,13.0241084846891,12.4421291937557,10.9465618816061,10.0636407962651,8.33461392890816,10.0505879640497,18.5711661310454,10.8486755921535,11.7851434189467,14.5219114415085,16.0303523409758,4.16494063332512,5.7434385681157,4.63783181922684,2.58127163094416,0,1.07940638327563,1.29955283489534,0.448026887097336,13.4826643326482,1.70430322578058,3.63700406444016,3.5333957451034,6.61964072950398,19.2489716121477,48.4129955442627,49.7746692207332,0.865964164044856,0.760079596425296,0.505524445014783,15.300639882354,6.99132285847364,4.00793775475027,2.4287945747259,3.04465478312141,2.30615497256059,2.11011696773672,3.17489509266403,2.13633205260448,1.48316980640624,4.33798070759735,3.5384422077995,5.50007289821191,2.65009822152472,4.363877278217,1.86391761218122,6.44117753425404,9.21565509979202,0.510914110417183,1.1981512450592,2.99951365496704,1.65191295194984,15.1288545798871,13.7250180845588,21.9895116197513,10.7771078519211,9.71718737855256,12.0517065844545,14.9261962022337,5.80484373946803,4.60305791257344,7.32895999457657,5.05060454127538,4.81445638962004,3.90833577536904,6.30217454318722,6.17889753126432,9.25296388458059,9.86475646193343,7.40243624021858,8.79591460512653,2.58681591519411,4.34943984385984,6.51019159406611,6.79506770525482,4.44875598760957,5.57203466435466,5.55611768301447,5.7719937377363,2.1066395619397,1.28673953557358,1.98914449576915,4.97101854085205,4.22146907965973,5.04173772090842,2.60419209143731,5.3126342571799,4.9365476123961,3.95307706075693,4.02410102099429,6.77238985729583,6.91151369636618,4.76085645829376,3.89130285820108,3.36259971078264,1.75640092232841,2.68412837520744,13.8791366052324,18.9344486777883,1.32167513193519,0.793351699990633,4.69234151177515,3.25131340604614,4.38149368495117,3.63030344322017,3.33567065767305,1.33157938278791,0.949058123089023,2.47048432086016,3.2673577144035,3.58121649674071,3.8992817423824,1.79763881730844,1.72910439899755,1.7922714592893,3.22435431620239,4.91268604221834,4.50830942692322,3.66572390121566,4.26695471768777,4.97964321221262,6.89278254654404,3.54264355151045,2.19798218977925,3.57851775373222,0.889357881261447,2.66952169145751,2.35870794135844,2.47348323623339,1.82574109249653,1.92941727801933,1.01850340712568,1.43848068725405,1.29708181420028,2.19649130550465,1.43768206527355,0.744281895337007,1.5601883655728,0.252578877947112,1.07638448113147,0.482443521363367,4.0645701836653,5.11626811780309,4.56301934037672,5.26209765903083,5.39787571063555,5.02518772325447,4.52282917683426,6.24427673144956,11.0344600874334,8.41565820665345,10.8429242687091,3.76885623846197,4.14443956478149,6.07526046042349,4.52373851817817,1.63171705145613,2.95058563811422,2.20749397043786,12.5229460190478,12.0728037189969,0.819674726883377,2.27223834483936,2.83957397474631,3.90438744296638,3.87762115919038,2.62865677747807,4.90157082981267,5.09537755419898,4.45291771842384,3.79932615284705,5.53402889125133,12.5315313404505,5.10984306749767,4.45164009168138,6.18970445543589,6.43383479592888,2.65490276679926,2.91336763385978,4.23252979750651,3.20628635585027,0.885905678642318,4.30409207121498,4.39328098385976,4.72593848320757,4.9909632973861,1.8962205476149,2.10837217149998,3.09406629744561,8.85142974959849,6.48219938512717,4.39819524861365,5.35842587578981,9.22169214939823,5.70780216326626,7.0756078858912,3.95804433848979,2.3467170806371,4.87213762986786,3.96951116498931,2.96795255294664,7.42736362801165,5.85035371803112,4.41677672811605,3.44695889464629,3.20628920292836,11.8672193286726,1.36696704638282,3.92135049130123,4.8150577116125,2.44878994106098,2.1871076435364,2.28778173206523,4.24946074984638,3.07893195112048,3.04039942369732,3.81868247206045,4.4287039101359,5.08298667817122,2.91614420218863,2.29997125615916,2.40198820120795,3.37160865962052,4.21532624199213,2.87931536182433,2.46268449254406,1.24267862617385,669.667211156818,5.08356256549528,4.13646226142744,6.22243802700952,3.87479470433193,3.54807863530634,7.51086327332825,9.24451132392046,9.01790362061113,98.5663212970105,318.849216927457,5.68820017130721,2.8381530140623,4.00572732942826,2.98817892848929,5.01274747868948,5.36439657909415,7.09153152167816,7.08909730437971,8.6831146955407,9.22102360525498,8.16692099608408,6.82205165178267,5.8689223400601,7.83075244616512,2.49403421976732,2.66383144048878,2.78112955489375,2.01461539636894,4.63655025677257,3.37828455812128,5.31139710375069,2.78678892802786,1.00314420807073,12.4245405375755,7.82552902062201,5.72895513439397,7.56154002312225,8.90607275701835,9.82012066606611,10.1253375034771,6.75481804836331,7.70342095273148,5.69536342927002,6.01966615988225,8.37952234142165,7.0000778359195,5.34834777550247,5.8691685535835,7.72142735490059,8.22312892865976,6.59312183164461,7.06022261101994,6.31743029409494,7.35089969681695,7.35642731405697,5.15028291084353,7.17081706934536,7.69635284005218,6.66811167796303,6.95305955669133,7.7163688185482,6.59337441285291,7.50714492685426,2.74295401908332,6.92155644021416,7.62995807831427,8.43009216467505,6.39943786824248,7.78454392603424,8.41468675214754,4.99832451731901,6.51859746460137,6.17256498823512,9.13489639556141,6.69830480153832,4.50154147486658,8.52152626522813,6.94463799532109,8.74337022782811,3.97683734357194,7.95022899978704,7.46024495068489,5.95596831622692,4.17362104116759
|short_description=p1@Cdkl3
|short_description=p1@Cdkl3
}}
}}

Latest revision as of 15:42, 1 October 2015

Short description:p1@Cdkl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdkl3_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000063303, ENSMUST00000063321, ENSMUST00000109074, ENSMUST00000109077, ENSMUST00000109078, ENSMUST00000109079, ENSMUST00000109080, ENSMUST00000109081, ENSMUST00000109082, ENSMUST00000120374, ENSMUST00000121591, ENSMUST00000135076, ENSMUST00000143228, NM_001166653, NM_001166654, NM_001166655, NM_001166656, NM_001166657, NM_153785, uc007iuu.2, uc007iuv.2, uc007iuw.2, uc007iux.2, uc007iuy.2, uc007iuz.2, uc011xul.1_5end
EntrezGene:Cdkl3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Cdkl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3109.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.30
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F121.99
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E36.77
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G118.93
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G74.98
kidney, neonate N10.CNhs11206.758-6D56.89
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C55.26
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C212.52
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H35.85
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C911.87
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G5669.67
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D99.02
testis, neonate N20.CNhs11110.839-18H398.57
testis, neonate N30.CNhs11130.1391-42E2318.85
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C48.68
thymus, neonate N07.CNhs11211.713-19D39.22
thymus, neonate N10.CNhs11194.748-24E48.17
thymus, neonate N20.CNhs11186.820-7A26.82
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G27.83
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.81e-1123
neuroblast (sensu Vertebrata)3.81e-1123
neuron3.67e-0833
neuronal stem cell3.67e-0833
neuroblast3.67e-0833
electrically signaling cell3.67e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.36e-1654
neurectoderm4.87e-1664
neural plate4.87e-1664
presumptive neural plate4.87e-1664
neural tube5.13e-1652
neural rod5.13e-1652
future spinal cord5.13e-1652
neural keel5.13e-1652
ecto-epithelium8.82e-1573
central nervous system1.21e-1473
nervous system1.64e-1475
brain1.80e-1347
future brain1.80e-1347
ectoderm-derived structure2.93e-1395
ectoderm2.93e-1395
presumptive ectoderm2.93e-1395
pre-chordal neural plate3.49e-1349
regional part of brain6.37e-1346
gray matter1.86e-1234
anterior neural tube4.68e-1240
regional part of forebrain1.78e-1139
forebrain1.78e-1139
future forebrain1.78e-1139
brain grey matter5.86e-1029
regional part of telencephalon5.86e-1029
telencephalon5.86e-1029
structure with developmental contribution from neural crest1.95e-0992
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