FFCP PHASE1:Mm9::chr11:6963404..6963407,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432530 | |EntrezGene=432530 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=168 | |||
|TSSclassifier=NA | |||
|UniProt=O88444 | |UniProt=O88444 | ||
|association_with_transcript=-84bp_to_ENSMUST00000020706,NM_009622,uc007hzf.1_5end | |association_with_transcript=-84bp_to_ENSMUST00000020706,NM_009622,uc007hzf.1_5end | ||
|cluster_id=chr11:6963404..6963407,+ | |||
|description=CAGE_peak_3_at_Adcy1_5end | |description=CAGE_peak_3_at_Adcy1_5end | ||
|id=chr11:6963404..6963407,+ | |id=chr11:6963404..6963407,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.28e-12!23;CL:0000337!9.28e-12!23;CL:0000540!6.36e-08!33;CL:0000047!6.36e-08!33;CL:0000031!6.36e-08!33;CL:0000404!6.36e-08!33;CL:0002319!2.83e-07!43;CL:0000221!5.45e-07!44;CL:0000133!5.45e-07!44;CL:0000393!6.25e-07!39;CL:0000211!6.25e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.54e-17!34;UBERON:0000073!4.64e-16!75;UBERON:0001016!4.64e-16!75;UBERON:0001017!7.66e-16!73;UBERON:0005743!7.66e-16!73;UBERON:0002346!1.29e-15!71;UBERON:0003075!1.29e-15!71;UBERON:0007284!1.29e-15!71;UBERON:0001049!1.57e-15!52;UBERON:0005068!1.57e-15!52;UBERON:0006241!1.57e-15!52;UBERON:0007135!1.57e-15!52;UBERON:0004121!1.41e-14!102;UBERON:0000924!1.41e-14!102;UBERON:0006601!1.41e-14!102;UBERON:0000033!7.15e-14!63;UBERON:0000955!2.28e-12!50;UBERON:0006238!2.28e-12!50;UBERON:0002791!1.01e-11!29;UBERON:0003528!1.01e-11!29;UBERON:0001893!1.01e-11!29;UBERON:0002616!1.48e-11!49;UBERON:0003056!1.10e-10!49;UBERON:0002021!2.07e-09!10;UBERON:0000411!2.07e-09!10;UBERON:0001950!2.07e-09!10;UBERON:0002780!2.45e-09!39;UBERON:0001890!2.45e-09!39;UBERON:0006240!2.45e-09!39;UBERON:0000956!4.74e-09!21;UBERON:0001869!4.74e-09!21;UBERON:0000203!4.74e-09!21;UBERON:0003080!5.84e-09!40;UBERON:0002240!1.01e-08!6;UBERON:0005174!1.01e-08!6;UBERON:0001137!1.01e-08!6;UBERON:0003076!1.94e-08!12;UBERON:0003057!1.94e-08!12;UBERON:0007811!9.82e-08!86;UBERON:0001948!1.27e-07!5;UBERON:0002315!1.27e-07!5;UBERON:0002619!4.04e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.92e-31,10;UBERON:0000411,2.92e-31,10;UBERON:0001950,2.92e-31,10;UBERON:0000956,1.76e-21,21;UBERON:0001869,1.76e-21,21;UBERON:0000203,1.76e-21,21;UBERON:0002619,1.36e-18,17;UBERON:0003528,1.21e-15,29;UBERON:0002791,1.21e-15,29;UBERON:0001893,1.21e-15,29;UBERON:0002616,1.70e-13,46;UBERON:0002020,2.20e-13,34;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0002780,1.07e-11,39;UBERON:0001890,1.07e-11,39;UBERON:0006240,1.07e-11,39;UBERON:0000073,1.59e-11,54;UBERON:0003080,2.07e-11,40;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.39e-09,49;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.893811366596314,0.614426133024974,0.131886287730194,0.548925861614458,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.854230084794618,0.559198337475902,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,3.56059401582874,0,0,0,0,0,0,0.879580464790051,1.39059456153821,0.511430914660661,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,2.40594455281163,1.37016503954128,0.755393897389701,2.02506750069542,2.2516060161211,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.893811366596314,0.614426133024974,0.131886287730194,0.548925861614458,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.854230084794618,0.559198337475902,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,3.56059401582874,0,0,0,0,0,0,0.879580464790051,1.39059456153821,0.511430914660661,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,2.40594455281163,1.37016503954128,0.755393897389701,2.02506750069542,2.2516060161211,0,0.51776031175182,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0.377252682772152,0,0.256100609619477,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p3@Adcy1 | |short_description=p3@Adcy1 | ||
}} | }} |
Latest revision as of 13:36, 25 September 2015
Short description: | p3@Adcy1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adcy1_5end |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | -84bp_to_ENSMUST00000020706, NM_009622, uc007hzf.1_5end |
EntrezGene: | Adcy1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.92e-31 | 10 |
visual cortex | 2.92e-31 | 10 |
neocortex | 2.92e-31 | 10 |
cerebral cortex | 1.76e-21 | 21 |
cerebral hemisphere | 1.76e-21 | 21 |
pallium | 1.76e-21 | 21 |
regional part of cerebral cortex | 1.36e-18 | 17 |
brain grey matter | 1.21e-15 | 29 |
regional part of telencephalon | 1.21e-15 | 29 |
telencephalon | 1.21e-15 | 29 |
regional part of brain | 1.70e-13 | 46 |
gray matter | 2.20e-13 | 34 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of forebrain | 1.07e-11 | 39 |
forebrain | 1.07e-11 | 39 |
future forebrain | 1.07e-11 | 39 |
regional part of nervous system | 1.59e-11 | 54 |
anterior neural tube | 2.07e-11 | 40 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
pre-chordal neural plate | 2.39e-09 | 49 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |