FFCP PHASE1:Mm9::chr11:88006251..88006271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:88006251..88006271,+ | |||
|description=CAGE_peak_at_chr11:88006251..88006271,+ | |description=CAGE_peak_at_chr11:88006251..88006271,+ | ||
|id=chr11:88006251..88006271,+ | |id=chr11:88006251..88006271,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.30e-24!50;CL:0000221!9.87e-22!44;CL:0000133!9.87e-22!44;CL:0002319!5.77e-21!43;CL:0000393!2.30e-19!39;CL:0000211!2.30e-19!39;CL:0000540!1.01e-15!33;CL:0000047!1.01e-15!33;CL:0000031!1.01e-15!33;CL:0000404!1.01e-15!33;CL:0000117!6.59e-15!23;CL:0000337!6.59e-15!23;CL:0002321!5.09e-14!70;CL:0000220!5.09e-14!70;CL:0000548!9.81e-11!115;CL:0000004!9.81e-11!115;CL:0000255!9.81e-11!115;CL:0000723!1.35e-10!91;CL:0000048!1.35e-10!91;CL:0000034!3.31e-10!97;CL:0002371!4.83e-10!118;CL:0000144!5.79e-10!121;CL:0000012!5.79e-10!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.46e-19,39;CL:0000211,5.46e-19,39;CL:0000117,9.78e-19,23;CL:0000337,9.78e-19,23;CL:0002319,3.58e-17,43;CL:0000221,9.52e-17,44;CL:0000133,9.52e-17,44;CL:0002321,4.77e-16,70;CL:0000540,9.69e-13,33;CL:0000047,9.69e-13,33;CL:0000031,9.69e-13,33;CL:0000404,9.69e-13,33;CL:0000723,3.38e-10,91;CL:0000048,3.38e-10,91;CL:0000034,1.89e-09,97;CL:0002613,8.48e-09,3;CL:0000680,1.14e-08,6;CL:0000187,1.14e-08,6;CL:0000056,1.14e-08,6;CL:0000120,1.69e-08,3;CL:0002494,2.81e-08,3;CL:0000737,2.81e-08,3;CL:0000746,2.81e-08,3;CL:0000513,2.81e-08,3;CL:0000222,1.68e-07,7;CL:0002453,9.67e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-13!75;UBERON:0001016!5.81e-13!75;UBERON:0004121!1.87e-12!102;UBERON:0000924!1.87e-12!102;UBERON:0006601!1.87e-12!102;UBERON:0001017!2.22e-12!73;UBERON:0005743!2.22e-12!73;UBERON:0002020!1.19e-10!34;UBERON:0002791!2.75e-07!29;UBERON:0003528!2.75e-07!29;UBERON:0001893!2.75e-07!29;UBERON:0001049!8.66e-07!52;UBERON:0005068!8.66e-07!52;UBERON:0006241!8.66e-07!52;UBERON:0007135!8.66e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.86e-09,73;UBERON:0001016,3.69e-09,75;UBERON:0002020,1.72e-07,34;UBERON:0002420,4.60e-07,8;UBERON:0007245,4.60e-07,8;UBERON:0010009,4.60e-07,8;UBERON:0010011,4.60e-07,8;UBERON:0000454,4.60e-07,8;UBERON:0004121,7.13e-07,95;UBERON:0000924,7.13e-07,95;UBERON:0006601,7.13e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,1.10128051297009,0,0.436050312760893,0.439372365468944,1.36100929351998,0.139986421625363,1.43752564364972,0,0,0,1.54355661621568,1.14613375975503,0.515672092277442,0,1.5869729378161,1.26766280701236,0,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.622137673850866,1.35005938331691,0.210324961351382,1.14260393761521,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.22885226604995,0.791317726381163,2.19570344645783,1.56274011167028,1.3959149950069,0,0.30559649555362,0.294628585473668,1.56608848879013,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,1.10128051297009,0,0.436050312760893,0.439372365468944,1.36100929351998,0.139986421625363,1.43752564364972,0,0,0,1.54355661621568,1.14613375975503,0.515672092277442,0,1.5869729378161,1.26766280701236,0,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.622137673850866,1.35005938331691,0.210324961351382,1.14260393761521,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.22885226604995,0.791317726381163,2.19570344645783,1.56274011167028,1.3959149950069,0,0.30559649555362,0.294628585473668,1.56608848879013,0.931997229126503,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr11:88006251..88006271,+ | |short_description=p@chr11:88006251..88006271,+ | ||
}} | }} |
Latest revision as of 07:16, 4 August 2015
Short description: | p@chr11:88006251..88006271, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:88006251..88006271, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.46e-19 | 39 |
electrically active cell | 5.46e-19 | 39 |
CNS neuron (sensu Vertebrata) | 9.78e-19 | 23 |
neuroblast (sensu Vertebrata) | 9.78e-19 | 23 |
neural cell | 3.58e-17 | 43 |
ectodermal cell | 9.52e-17 | 44 |
neurectodermal cell | 9.52e-17 | 44 |
embryonic cell | 4.77e-16 | 70 |
neuron | 9.69e-13 | 33 |
neuronal stem cell | 9.69e-13 | 33 |
neuroblast | 9.69e-13 | 33 |
electrically signaling cell | 9.69e-13 | 33 |
somatic stem cell | 3.38e-10 | 91 |
multi fate stem cell | 3.38e-10 | 91 |
stem cell | 1.89e-09 | 97 |
striatum neuron | 8.48e-09 | 3 |
muscle precursor cell | 1.14e-08 | 6 |
muscle cell | 1.14e-08 | 6 |
myoblast | 1.14e-08 | 6 |
granule cell | 1.69e-08 | 3 |
cardiocyte | 2.81e-08 | 3 |
striated muscle cell | 2.81e-08 | 3 |
cardiac muscle cell | 2.81e-08 | 3 |
cardiac muscle myoblast | 2.81e-08 | 3 |
mesodermal cell | 1.68e-07 | 7 |
oligodendrocyte precursor cell | 9.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.86e-09 | 73 |
nervous system | 3.69e-09 | 75 |
gray matter | 1.72e-07 | 34 |
basal ganglion | 4.60e-07 | 8 |
nuclear complex of neuraxis | 4.60e-07 | 8 |
aggregate regional part of brain | 4.60e-07 | 8 |
collection of basal ganglia | 4.60e-07 | 8 |
cerebral subcortex | 4.60e-07 | 8 |
ectoderm-derived structure | 7.13e-07 | 95 |
ectoderm | 7.13e-07 | 95 |
presumptive ectoderm | 7.13e-07 | 95 |