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FFCP PHASE1:Mm9::chr12:52694352..52694368,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12810
|EntrezGene=12810
|HGNC=
|HGNC=
|MCL_coexpression_id=1624
|TSSclassifier=NA
|UniProt=Q62507
|UniProt=Q62507
|association_with_transcript=0bp_to_ENSMUST00000085412_5end
|association_with_transcript=0bp_to_ENSMUST00000085412_5end
|cluster_id=chr12:52694352..52694368,+
|description=CAGE_peak_1_at_Coch_5end
|description=CAGE_peak_1_at_Coch_5end
|id=chr12:52694352..52694368,+
|id=chr12:52694352..52694368,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.28e-13!63;UBERON:0004121!1.62e-12!102;UBERON:0000924!1.62e-12!102;UBERON:0006601!1.62e-12!102;UBERON:0001049!2.34e-11!52;UBERON:0005068!2.34e-11!52;UBERON:0006241!2.34e-11!52;UBERON:0007135!2.34e-11!52;UBERON:0002346!1.73e-10!71;UBERON:0003075!1.73e-10!71;UBERON:0007284!1.73e-10!71;UBERON:0000955!2.46e-10!50;UBERON:0006238!2.46e-10!50;UBERON:0002020!2.58e-10!34;UBERON:0003056!3.05e-10!49;UBERON:0002616!6.84e-10!49;UBERON:0000073!8.02e-10!75;UBERON:0001016!8.02e-10!75;UBERON:0001017!8.37e-10!73;UBERON:0005743!8.37e-10!73;UBERON:0000153!2.91e-09!94;UBERON:0002791!1.21e-08!29;UBERON:0003528!1.21e-08!29;UBERON:0001893!1.21e-08!29;UBERON:0003080!1.84e-08!40;UBERON:0002780!3.80e-08!39;UBERON:0001890!3.80e-08!39;UBERON:0006240!3.80e-08!39;UBERON:0007811!5.27e-08!86;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10;UBERON:0002619!7.14e-07!17;UBERON:0000064!8.18e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.79e-13,73;UBERON:0004121,1.23e-12,95;UBERON:0000924,1.23e-12,95;UBERON:0006601,1.23e-12,95;UBERON:0002346,3.76e-10,64;UBERON:0003075,3.76e-10,64;UBERON:0007284,3.76e-10,64;UBERON:0000073,4.06e-10,54;UBERON:0002020,1.41e-09,34;UBERON:0002021,2.22e-09,10;UBERON:0000411,2.22e-09,10;UBERON:0001950,2.22e-09,10;UBERON:0001049,3.20e-09,52;UBERON:0005068,3.20e-09,52;UBERON:0006241,3.20e-09,52;UBERON:0007135,3.20e-09,52;UBERON:0001017,2.23e-08,73;UBERON:0000955,3.10e-08,47;UBERON:0006238,3.10e-08,47;UBERON:0003056,5.32e-08,49;UBERON:0001016,8.50e-08,75;UBERON:0002616,9.44e-08,46;UBERON:0003528,1.43e-07,29;UBERON:0002791,1.43e-07,29;UBERON:0001893,1.43e-07,29;UBERON:0002106,7.47e-07,6;UBERON:0004457,7.47e-07,6;UBERON:0000042,7.47e-07,6;UBERON:0004854,7.47e-07,6;UBERON:0009034,7.47e-07,6;UBERON:0002095,7.47e-07,6;UBERON:0004782,7.47e-07,6;UBERON:0003281,7.47e-07,6;UBERON:0009664,7.47e-07,6;UBERON:0002296,7.47e-07,6;UBERON:0005602,7.47e-07,6;UBERON:0001179,7.47e-07,6;UBERON:0006293,7.47e-07,6
|phase1_expression=62.1377526766601,0,0,0,0.500895729946347,0,0.467225281191051,0.129123323441576,0,0,0,0,0,0,11.9919514253639,5.4668322195253,0,1.73504190947031,0.959801035240171,0.84877930359606,0.935476191661768,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.436050312760893,0.219686182734472,1.55543919259427,7.41928034614421,0,0.167782606057736,0,0,0,0,0,1.41621522601718,2.11596391708813,2.53532561402472,2.37191172448392,8.89294796111139,0,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0.210324961351382,3.99911378165325,2.42955395046775,0.734944795289724,0.670918297127655,0.919218786610021,0,3.70293280447044,3.22573719838111,1.71452174049252,1.00636407962651,2.6045668527838,2.79182999001381,3.93933827022176,3.97275444219706,2.65165726926301,3.84403538157578,2.05039390407831,0.454357159999104,0.831287161174641,0,0,0,0,0,0,10.2524426696179,0,0,0,1.12674735821344,0,0,0,0,0,0.505524445014783,8.79215873836762,4.14300613835475,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,6.92145909656247,0.578397427679647,0,0.161766849947409,0.662524555381181,0,1.86391761218122,2.92780797011547,2.09446706813455,0,0,0,0,2.69623150928681,14.1825186873774,2.38743269014442,7.82209440865244,9.2057564638919,2.90903262383384,5.67844420737152,1.52759045775474,0,0.252722758433675,0.841767423545896,0.260240885925407,2.98872735763515,3.96136685571768,2.26057226753573,1.29269348387523,1.92170580427275,2.43624483855295,3.3631438196072,0,0.567318240503458,0.351902248327898,2.6303487891309,2.78047249225598,10.0993128291428,6.79081050146213,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,4.20579897128254,0.720332286654991,0,0,0,1.16118335930219,0.644337306610467,0,0.444756087689741,0,0,0.164698954724011,0,0.596869416123452,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.210407459670956,0.189709611372772,0.295220295959204,1.255989822731,0.370191491765402,0,0.667380422864376,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,2.27389694124582,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0,0.252470927204373,1.26203287766503,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,5.14114106274891,2.41298144854057,1.6025904330053,1.95464351224291,12.0428189769951,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,1.36175842301515,0,0.129358683782755,0.643011105094777,0.177340233642274,0.891844088010353,1.48094118541909,0.608929898229199,27.4565898434541,39.1889331098067,1.54369878638473,14.5099902588502,2.58343082713449,4.16159182004275,12.0566067443168,23.1438668640536,0,0.556275906031529,119.780487439295,10.9385040020508,58.3362761214592,107.181652035669,118.923978117292,154.654045087609,0,0,0,0,0.158167996790568,0,0.540026704109006,0.627264888043406,0,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,4.97071450469541,0,0.598066184175915,0.66183396182839,1.75006069509643,1.03327858782185,2.02747350588934,1.29092962510329,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.403865799792591,0.457240839929999,0.806609481094724,0.584747284438515,0.192423683280659,0.116876902181569,2.0405734525369,0,0.0897138566094757,1.00730769818447,0.19318959403219,20.8327547750812,0.73260649706906,9.00347192132076,3.00943262421218,15.2482997506608,14.2700823317225,15.4681788628637,13.9201077698387,13.0165678756422,10.5755145634558,11.4753825039407,12.6089936902782,13.1411298605419,10.8729665467882,0.103787347584177,2.39414924040619,1.19513524027894,0.486213434136588,0.419226325255965,0.551530525350042,2.22246727801615,2.26638562962784,1.60459604795908,2.02157769411038,1.52087579934144,3.2066478035633,1.03005658216871,2.30490548657529,1.95280594449085,2.85776214769844,2.0859178670074,2.12200142510076,3.70877310722976,1.91358596174717,2.74295401908332,2.48466128623072,2.62279808942053,2.90692833264657,2.91739079287525,2.45382362885862,3.65855945745545,2.63069711437843,2.03706170768793,1.12228454331548,3.44041552560105,1.97008964751127,1.63692417267876,2.47898945897546,1.92906610981141,4.74640098082097,3.04111090979031,3.00819475667618,1.72159498861959,1.98532277207564,1.62307484934295
|phase1_expression=62.1377526766601,0,0,0,0.500895729946347,0,0.467225281191051,0.129123323441576,0,0,0,0,0,0,11.9919514253639,5.4668322195253,0,1.73504190947031,0.959801035240171,0.84877930359606,0.935476191661768,0,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,0.436050312760893,0.219686182734472,1.55543919259427,7.41928034614421,0,0.167782606057736,0,0,0,0,0,1.41621522601718,2.11596391708813,2.53532561402472,2.37191172448392,8.89294796111139,0,0,0.7104801149461,0,0,0.311068836925433,0.135005938331691,0.210324961351382,3.99911378165325,2.42955395046775,0.734944795289724,0.670918297127655,0.919218786610021,0,3.70293280447044,3.22573719838111,1.71452174049252,1.00636407962651,2.6045668527838,2.79182999001381,3.93933827022176,3.97275444219706,2.65165726926301,3.84403538157578,2.05039390407831,0.454357159999104,0.831287161174641,0,0,0,0,0,0,10.2524426696179,0,0,0,1.12674735821344,0,0,0,0,0,0.505524445014783,8.79215873836762,4.14300613835475,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,6.92145909656247,0.578397427679647,0,0.161766849947409,0.662524555381181,0,1.86391761218122,2.92780797011547,2.09446706813455,0,0,0,0,2.69623150928681,14.1825186873774,2.38743269014442,7.82209440865244,9.2057564638919,2.90903262383384,5.67844420737152,1.52759045775474,0,0.252722758433675,0.841767423545896,0.260240885925407,2.98872735763515,3.96136685571768,2.26057226753573,1.29269348387523,1.92170580427275,2.43624483855295,3.3631438196072,0,0.567318240503458,0.351902248327898,2.6303487891309,2.78047249225598,10.0993128291428,6.79081050146213,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,4.20579897128254,0.720332286654991,0,0,0,1.16118335930219,0.644337306610467,0,0.444756087689741,0,0,0.164698954724011,0,0.596869416123452,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.210407459670956,0.189709611372772,0.295220295959204,1.255989822731,0.370191491765402,0,0.667380422864376,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,2.27389694124582,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0,0.252470927204373,1.26203287766503,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,5.14114106274891,2.41298144854057,1.6025904330053,1.95464351224291,12.0428189769951,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.775284879504663,1.09060118843252,0.712994756769443,0.632073515871632,0,1.03135543248187,1.36175842301515,0,0.129358683782755,0.643011105094777,0.177340233642274,0.891844088010353,1.48094118541909,0.608929898229199,27.4565898434541,39.1889331098067,1.54369878638473,14.5099902588502,2.58343082713449,4.16159182004275,12.0566067443168,23.1438668640536,0,0.556275906031529,119.780487439295,10.9385040020508,58.3362761214592,107.181652035669,118.923978117292,154.654045087609,0,0,0,0,0.158167996790568,0,0.540026704109006,0.627264888043406,0,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,4.97071450469541,0,0.598066184175915,0.66183396182839,1.75006069509643,1.03327858782185,2.02747350588934,1.29092962510329,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.403865799792591,0.457240839929999,0.806609481094724,0.584747284438515,0.192423683280659,0.116876902181569,2.0405734525369,0,0.0897138566094757,1.00730769818447,0.19318959403219,20.8327547750812,0.73260649706906,9.00347192132076,3.00943262421218,15.2482997506608,14.2700823317225,15.4681788628637,13.9201077698387,13.0165678756422,10.5755145634558,11.4753825039407,12.6089936902782,13.1411298605419,10.8729665467882,0.103787347584177,2.39414924040619,1.19513524027894,0.486213434136588,0.419226325255965,0.551530525350042,2.22246727801615,2.26638562962784,1.60459604795908,2.02157769411038,1.52087579934144,3.2066478035633,1.03005658216871,2.30490548657529,1.95280594449085,2.85776214769844,2.0859178670074,2.12200142510076,3.70877310722976,1.91358596174717,2.74295401908332,2.48466128623072,2.62279808942053,2.90692833264657,2.91739079287525,2.45382362885862,3.65855945745545,2.63069711437843,2.03706170768793,1.12228454331548,3.44041552560105,1.97008964751127,1.63692417267876,2.47898945897546,1.92906610981141,4.74640098082097,3.04111090979031,3.00819475667618,1.72159498861959,1.98532277207564,1.62307484934295
|short_description=p1@Coch
|short_description=p1@Coch
}}
}}

Latest revision as of 15:43, 26 September 2015

Short description:p1@Coch
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Coch_5end
Coexpression cluster:MCL_coexpression_mm9:1624
Association with transcript: 0bp_to_ENSMUST00000085412_5end
EntrezGene:Coch
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Coch

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G612.04
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I727.46
placenta, adult pregnant day17.CNhs10464.577-18G339.19
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H34.16
skin, neonate N06.CNhs11097.693-20I512.06
skin, neonate N10.CNhs11108.762-6C423.14
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G2119.78
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F258.34
spleen, neonate N10.CNhs11116.752-24D1107.18
spleen, neonate N20.CNhs11112.824-19H1118.92
spleen, neonate N25.CNhs11099.1354-25G3154.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F520.83
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D59.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium6.79e-1373
ectoderm-derived structure1.23e-1295
ectoderm1.23e-1295
presumptive ectoderm1.23e-1295
neurectoderm3.76e-1064
neural plate3.76e-1064
presumptive neural plate3.76e-1064
regional part of nervous system4.06e-1054
gray matter1.41e-0934
occipital lobe2.22e-0910
visual cortex2.22e-0910
neocortex2.22e-0910
neural tube3.20e-0952
neural rod3.20e-0952
future spinal cord3.20e-0952
neural keel3.20e-0952
central nervous system2.23e-0873
brain3.10e-0847
future brain3.10e-0847
pre-chordal neural plate5.32e-0849
nervous system8.50e-0875
regional part of brain9.44e-0846
brain grey matter1.43e-0729
regional part of telencephalon1.43e-0729
telencephalon1.43e-0729
spleen7.47e-076
cavity lining7.47e-076
serous membrane7.47e-076
gastrointestinal system mesentery7.47e-076
stomach region7.47e-076
mesentery7.47e-076
gastrointestinal system serosa7.47e-076
mesentery of stomach7.47e-076
gut mesentery7.47e-076
dorsal mesentery7.47e-076
dorsal mesogastrium7.47e-076
peritoneal cavity7.47e-076
spleen primordium7.47e-076
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