FFCP PHASE1:Hg19::chr10:103825080..103825188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79803 | |EntrezGene=79803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18817 | |HGNC=18817 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YV9 | |UniProt=Q86YV9 | ||
|association_with_transcript=0bp_to_ENST00000299238,NM_024747,uc001kuj.2_5end | |association_with_transcript=0bp_to_ENST00000299238,NM_024747,uc001kuj.2_5end | ||
|cluster_id=chr10:103825080..103825188,+ | |||
|description=CAGE_peak_1_at_HPS6_5end | |description=CAGE_peak_1_at_HPS6_5end | ||
|id=chr10:103825080..103825188,+ | |id=chr10:103825080..103825188,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.45e-20!591;CL:0000144!2.39e-19!625;CL:0000222!7.02e-16!119;CL:0000003!2.96e-13!722;CL:0000220!8.53e-11!246;CL:0002321!2.72e-10!248;CL:0000183!3.91e-10!59;CL:0000012!8.15e-10!682;CL:0000548!1.20e-09!679;CL:0000004!1.20e-09!679;CL:0000255!1.20e-09!679;CL:0000115!4.10e-09!35;CL:0000192!9.52e-09!42;CL:0000514!9.52e-09!42;CL:0000213!1.42e-08!57;CL:0000215!1.42e-08!57;CL:0002078!1.94e-08!44;CL:0000393!2.32e-08!60;CL:0000211!2.32e-08!60;CL:0000359!3.97e-08!32;CL:0000680!4.22e-08!57;CL:0000056!4.22e-08!57;CL:0000355!4.22e-08!57;CL:0000187!6.09e-08!54;CL:0000723!2.89e-07!436;CL:0000048!4.48e-07!430;CL:0000055!6.23e-07!180;CL:0000034!7.77e-07!444 | |ontology_enrichment_celltype=CL:0002371!1.45e-20!591;CL:0000144!2.39e-19!625;CL:0000222!7.02e-16!119;CL:0000003!2.96e-13!722;CL:0000220!8.53e-11!246;CL:0002321!2.72e-10!248;CL:0000183!3.91e-10!59;CL:0000012!8.15e-10!682;CL:0000548!1.20e-09!679;CL:0000004!1.20e-09!679;CL:0000255!1.20e-09!679;CL:0000115!4.10e-09!35;CL:0000192!9.52e-09!42;CL:0000514!9.52e-09!42;CL:0000213!1.42e-08!57;CL:0000215!1.42e-08!57;CL:0002078!1.94e-08!44;CL:0000393!2.32e-08!60;CL:0000211!2.32e-08!60;CL:0000359!3.97e-08!32;CL:0000680!4.22e-08!57;CL:0000056!4.22e-08!57;CL:0000355!4.22e-08!57;CL:0000187!6.09e-08!54;CL:0000723!2.89e-07!436;CL:0000048!4.48e-07!430;CL:0000055!6.23e-07!180;CL:0000034!7.77e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.70e-08;36!CL:0000359;7.85e-08;32!CL:0002681;8.90e-07;12!CL:0002584;8.90e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.50e-16,121;CL:0002321,1.22e-10,250;CL:0000115,1.42e-09,36;CL:0000213,5.72e-09,58;CL:0000215,5.72e-09,58;CL:0002078,7.31e-09,45;CL:0000192,9.92e-09,43;CL:0000514,9.92e-09,43;CL:0000393,2.25e-08,61;CL:0000211,2.25e-08,61;CL:0000359,3.97e-08,32;CL:0000680,4.11e-08,58;CL:0000056,4.11e-08,58;CL:0000355,4.11e-08,58;CL:0000187,5.95e-08,55;CL:0000723,2.42e-07,433;CL:0000048,3.75e-07,427;CL:0000034,6.55e-07,441;CL:0002681,8.59e-07,12;CL:0002584,8.59e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.90e-11!79;UBERON:0007798!2.90e-11!79;UBERON:0000486!1.55e-10!82;UBERON:0004872!3.24e-10!84;UBERON:0004535!4.06e-10!110;UBERON:0001009!6.37e-10!113;UBERON:0000055!9.94e-10!69;UBERON:0001981!1.23e-09!60;UBERON:0007500!1.23e-09!60;UBERON:0004537!1.23e-09!60;UBERON:0006965!1.23e-09!60;UBERON:0001637!1.67e-09!42;UBERON:0003509!1.67e-09!42;UBERON:0004572!1.67e-09!42;UBERON:0000914!5.55e-09!83;UBERON:0002329!5.55e-09!83;UBERON:0003077!5.55e-09!83;UBERON:0003059!5.55e-09!83;UBERON:0007282!5.55e-09!83;UBERON:0009618!5.55e-09!83;UBERON:0007285!5.55e-09!83;UBERON:0004290!7.02e-09!70;UBERON:0003914!7.30e-09!118;UBERON:0005256!3.39e-08!143;UBERON:0003081!1.12e-07!216;UBERON:0001134!4.54e-07!61;UBERON:0002036!4.54e-07!61;UBERON:0003082!4.54e-07!61;UBERON:0000490!5.72e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.83e-07;42!UBERON:0003509;2.83e-07;42!UBERON:0004572;2.83e-07;42!UBERON:0000353;3.33e-07;15!UBERON:0003914;5.54e-07;74!UBERON:0001225;8.90e-07;12!UBERON:0008987;8.90e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.10e-11,78;UBERON:0002049,1.72e-11,78;UBERON:0007798,1.72e-11,78;UBERON:0000486,1.48e-10,83;UBERON:0004872,2.04e-10,83;UBERON:0004535,2.80e-10,109;UBERON:0001009,4.45e-10,112;UBERON:0000055,5.94e-10,68;UBERON:0007500,6.97e-10,59;UBERON:0001981,6.97e-10,59;UBERON:0004537,6.97e-10,59;UBERON:0006965,6.97e-10,59;UBERON:0001637,1.67e-09,42;UBERON:0003509,1.67e-09,42;UBERON:0004572,1.67e-09,42;UBERON:0002329,6.73e-09,71;UBERON:0003059,6.73e-09,71;UBERON:0007282,6.73e-09,71;UBERON:0004290,6.73e-09,71;UBERON:0009618,6.73e-09,71;UBERON:0003914,7.95e-09,117;UBERON:0007524,1.26e-08,73;UBERON:0003077,1.30e-08,72;UBERON:0007285,1.30e-08,72;UBERON:0000490,1.60e-08,148;UBERON:0000353,3.90e-07,15;UBERON:0001134,4.31e-07,62;UBERON:0002036,4.31e-07,62;UBERON:0003082,4.31e-07,62;UBERON:0003081,7.28e-07,203;UBERON:0001225,8.59e-07,12;UBERON:0008987,8.59e-07,12 | |||
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| ||
|short_description=p1@HPS6 | |short_description=p1@HPS6 | ||
}} | }} |
Latest revision as of 23:54, 15 September 2015
Short description: | p1@HPS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPS6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299238, NM_024747, uc001kuj.2_5end |
EntrezGene: | HPS6 |
HGNC: | 18817 |
UniProt: | Q86YV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.50e-16 | 121 |
embryonic cell | 1.22e-10 | 250 |
endothelial cell | 1.42e-09 | 36 |
lining cell | 5.72e-09 | 58 |
barrier cell | 5.72e-09 | 58 |
meso-epithelial cell | 7.31e-09 | 45 |
smooth muscle cell | 9.92e-09 | 43 |
smooth muscle myoblast | 9.92e-09 | 43 |
electrically responsive cell | 2.25e-08 | 61 |
electrically active cell | 2.25e-08 | 61 |
vascular associated smooth muscle cell | 3.97e-08 | 32 |
muscle precursor cell | 4.11e-08 | 58 |
myoblast | 4.11e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-08 | 58 |
muscle cell | 5.95e-08 | 55 |
somatic stem cell | 2.42e-07 | 433 |
multi fate stem cell | 3.75e-07 | 427 |
stem cell | 6.55e-07 | 441 |
kidney cortical cell | 8.59e-07 | 12 |
renal cortical epithelial cell | 8.59e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.10e-11 | 78 |
vasculature | 1.72e-11 | 78 |
vascular system | 1.72e-11 | 78 |
multilaminar epithelium | 1.48e-10 | 83 |
splanchnic layer of lateral plate mesoderm | 2.04e-10 | 83 |
cardiovascular system | 2.80e-10 | 109 |
circulatory system | 4.45e-10 | 112 |
vessel | 5.94e-10 | 68 |
epithelial tube open at both ends | 6.97e-10 | 59 |
blood vessel | 6.97e-10 | 59 |
blood vasculature | 6.97e-10 | 59 |
vascular cord | 6.97e-10 | 59 |
artery | 1.67e-09 | 42 |
arterial blood vessel | 1.67e-09 | 42 |
arterial system | 1.67e-09 | 42 |
somite | 6.73e-09 | 71 |
presomitic mesoderm | 6.73e-09 | 71 |
presumptive segmental plate | 6.73e-09 | 71 |
dermomyotome | 6.73e-09 | 71 |
trunk paraxial mesoderm | 6.73e-09 | 71 |
epithelial tube | 7.95e-09 | 117 |
dense mesenchyme tissue | 1.26e-08 | 73 |
paraxial mesoderm | 1.30e-08 | 72 |
presumptive paraxial mesoderm | 1.30e-08 | 72 |
unilaminar epithelium | 1.60e-08 | 148 |
parenchyma | 3.90e-07 | 15 |
skeletal muscle tissue | 4.31e-07 | 62 |
striated muscle tissue | 4.31e-07 | 62 |
myotome | 4.31e-07 | 62 |
lateral plate mesoderm | 7.28e-07 | 203 |
cortex of kidney | 8.59e-07 | 12 |
renal parenchyma | 8.59e-07 | 12 |