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FFCP PHASE1:Mm9::chr14:66915866..66915920,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66854
|EntrezGene=66854
|HGNC=
|HGNC=
|MCL_coexpression_id=1662
|TSSclassifier=NA
|UniProt=Q8C006,F8WH08
|UniProt=Q8C006,F8WH08
|association_with_transcript=0bp_to_ENSMUST00000022623,ENSMUST00000111119,uc007uke.1_5end
|association_with_transcript=0bp_to_ENSMUST00000022623,ENSMUST00000111119,uc007uke.1_5end
|cluster_id=chr14:66915866..66915920,+
|description=CAGE_peak_1_at_Trim35_5end
|description=CAGE_peak_1_at_Trim35_5end
|id=chr14:66915866..66915920,+
|id=chr14:66915866..66915920,+
|ontology_enrichment_celltype=CL:0000055!9.14e-17!50;CL:0002319!2.38e-16!43;CL:0000221!4.32e-16!44;CL:0000133!4.32e-16!44;CL:0000393!1.75e-13!39;CL:0000211!1.75e-13!39;CL:0000540!2.43e-12!33;CL:0000047!2.43e-12!33;CL:0000031!2.43e-12!33;CL:0000404!2.43e-12!33;CL:0000117!7.49e-11!23;CL:0000337!7.49e-11!23;CL:0002321!9.08e-07!70;CL:0000220!9.08e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002319,2.38e-16,43;CL:0000221,4.32e-16,44;CL:0000133,4.32e-16,44;CL:0000393,1.75e-13,39;CL:0000211,1.75e-13,39;CL:0000540,2.43e-12,33;CL:0000047,2.43e-12,33;CL:0000031,2.43e-12,33;CL:0000404,2.43e-12,33;CL:0000117,7.49e-11,23;CL:0000337,7.49e-11,23;CL:0002321,9.00e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.41e-19,73;UBERON:0001016,9.21e-19,75;UBERON:0010314,2.99e-16,92;UBERON:0000073,4.54e-13,54;UBERON:0004121,5.36e-13,95;UBERON:0000924,5.36e-13,95;UBERON:0006601,5.36e-13,95;UBERON:0001049,6.59e-13,52;UBERON:0005068,6.59e-13,52;UBERON:0006241,6.59e-13,52;UBERON:0007135,6.59e-13,52;UBERON:0002020,3.68e-12,34;UBERON:0002346,5.81e-12,64;UBERON:0003075,5.81e-12,64;UBERON:0007284,5.81e-12,64;UBERON:0002780,1.14e-10,39;UBERON:0001890,1.14e-10,39;UBERON:0006240,1.14e-10,39;UBERON:0003080,1.82e-10,40;UBERON:0002616,1.84e-10,46;UBERON:0000955,2.30e-10,47;UBERON:0006238,2.30e-10,47;UBERON:0003528,1.80e-09,29;UBERON:0002791,1.80e-09,29;UBERON:0001893,1.80e-09,29;UBERON:0003056,2.56e-09,49;UBERON:0010371,6.28e-09,73;UBERON:0000956,9.49e-07,21;UBERON:0001869,9.49e-07,21;UBERON:0000203,9.49e-07,21
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516514,45.7190134244542,48.7655388779482,31.1489570960995,20.6087807533951,9.94142900939081,45.6591280334194,106.007231145181,111.849939548998,122.115346280062,119.343676893424,105.597578431736,126.86317497606,129.55336291973,111.675201813382,60.8791984481535,64.230691395504,47.0856569735986,59.1957628647279,57.3127140979736,45.6022088652061,45.6518073952078,49.2729759857537,44.2319254233485,44.1591686251986,43.2136405778072,45.4954635730349,36.8015575749468,44.1484199751078,41.755939271903,46.7507608726276,57.3627870546485,21.0886655705361,20.185617737132,22.6644232091506,39.7970563706312,58.5569323407688,48.1688771822907,23.7948900777763,10.5330141847426,108.432353782477,112.779682944258,114.579102687879,98.6437266652767,86.3203974911009,104.999751737168,90.453015031062,74.3029985319964,94.7067634776988,92.1613354918239,75.764763736449,127.68795948833,95.9522864338234,90.4356987494054,96.2124416462439,115.269879798159,118.901999373864,122.178788942664,142.809048268358,133.676825023049,133.076632442376,120.343605804317,109.560563739762,106.153702687273,105.853569285195,103.83202469971,131.760478599301,118.253352144251,121.153254836172,114.226362024292,105.260860482323,116.956556259003,116.118424504345,111.044662307099,116.69563171501,112.960501535388,119.634894258793,111.541557649645,113.396435061295,125.695868851333,120.770448450409,122.539576075201,143.640096152561,113.258830906941,113.043274034949,161.627443925851,112.988966879132,120.112919212999,191.86219706505,126.398883155482,106.195468714153
|phase1_expression=75.7504046805675,4.53668029931169,1.36499771816861,1.20985684522732,0,21.4885468047219,26.3982283872944,65.8528949552039,21.2590970449017,27.6196141059952,36.8118631684836,33.663851096032,42.6289817528702,49.8296293788285,22.9845735652807,20.0450514715928,8.39474253753776,61.5151222448564,71.8479632094071,60.2633305553203,47.3691126141459,49.8440575028444,59.8147517128162,20.6390225403495,18.3527424853736,2.29692785646008,8.18447792702242,9.69620547086501,7.79096019771133,7.81293402255785,16.8515188098032,1.90509202037889,0.61506478758457,0,2.59966457776147,4.48833542467929,2.6542016314108,18.8339233831608,23.440060335714,13.088093599345,27.6468799374577,32.1031377930469,36.4132764773365,111.040993454459,119.928909632686,107.925490271069,142.395224671343,153.489710091834,162.12840285804,157.293788351095,113.249015094918,155.252769514169,41.7778689083764,46.423177088726,41.6756310936655,97.244066821588,104.584705577646,109.322483562818,209.397536989684,216.886301501533,201.558386314965,150.446972238695,96.043837980003,85.9404230003736,94.9311708064295,100.888176322346,137.216850617429,123.334076008219,143.195354598008,169.162440729608,156.061121322725,140.825935311075,144.668894323307,155.685805802207,142.713906346154,161.782506443364,106.812404569407,78.910774936646,83.1011344916277,230.273458376918,204.383395807783,208.886261593261,90.1761086774461,104.111082855861,84.497431020576,151.439092933465,131.551433058371,165.522707892867,77.9979791331796,93.1041620515598,94.2059588280453,32.6961073252927,0,0,1.94932925234301,1.79210754838934,43.5377702408431,76.1823541923918,88.0674555603725,79.5014042648265,75.3512295805241,112.9273001246,112.114305470924,120.881339536066,40.0508425870746,38.0039798212648,38.9253822661383,16.5566625592637,36.251303710604,104.206381623507,103.570740079383,115.087950801989,119.458827578638,109.876804962862,101.00869942957,116.618596753939,38.8096099342967,30.6550636670213,58.3842964286917,181.178871941098,79.9446296826625,60.6094066419028,7.45567044872489,55.628351432194,66.8134994734922,10.9846533739694,34.7463861067169,37.1939693215913,39.264700165577,71.4501349961004,124.897664569485,148.146481141067,85.3477412144077,86.1761091203214,90.1800113388491,89.3949359503345,91.451748737584,55.4855088921015,60.9061847825156,21.0441855886474,73.1276889450395,100.007415428561,77.7868400759109,81.0791919956147,94.3666243228917,90.9607414022433,90.7969710983772,50.4471572941081,58.2033580918674,62.4050064553804,72.315912031383,80.0064423360648,67.5654815618203,91.938571961852,65.644501514134,89.167351534685,35.812872552975,34.2272716462571,29.8371674365372,89.8925852804078,102.956940331701,93.6322719597277,108.429088898026,109.991205546799,106.752842118066,107.430682474688,138.160801720804,129.726295369925,129.508601881909,94.5604593095589,84.7169059754192,83.7725927947154,67.4018853943525,66.7005901239048,102.200915002166,155.591773917478,1.32167513193519,8.99131926656051,67.8256636702044,69.6710015581316,59.2790322081629,48.0006788603555,46.4770111635779,44.1323452581137,20.8792787079585,38.2101574959705,32.4222419352348,32.4299049427076,42.3072069048491,23.3693046250098,15.561939590978,14.3381716743144,83.2642085184029,70.7198293054221,67.6246414038483,66.5939842054178,60.7071284834669,68.1018811134993,59.4423448968018,34.6883847752065,35.4817124921507,34.0576172424169,10.6722945751374,29.6984288174647,30.2700852474333,21.586762788946,18.8659912891308,22.1882986972223,23.1709525121092,26.1803485080238,20.1047681201044,13.1789478330279,40.2550978276593,28.2827120228063,20.594486425561,12.6289438973556,11.8402292924462,5.78932225636041,61.3380591353128,87.3555408261935,70.0749398700711,75.5365631699587,79.0906136732252,74.3727783041662,79.2685324150426,113.567783053239,121.694331249979,119.36946772069,128.20163400062,90.4525497230874,78.0536118033848,76.3747029310381,58.8086007363162,60.9174365876955,12.7858710984949,14.0727740615414,66.4679442549459,72.9056690603504,69.0166120035803,204.248980108338,82.347645267643,89.4104724439302,104.480347900407,113.510179027462,110.062544996703,123.421367423931,120.633589099119,118.655878311993,115.819318938331,78.7237225233427,77.9251067793395,103.634181334343,93.1713407502455,59.2242741471402,10.619611067197,91.528299830428,81.0227132665533,44.6994039021478,58.1744728975122,60.5647241449537,61.5059337740366,68.7078748712485,60.9610517037873,29.3914184880309,18.9753495434998,26.8152412445286,85.109901438447,93.2716467082187,113.706283045041,112.741280426618,104.808078082584,115.761362623744,100.539451587896,112.652031172402,49.7504021095066,43.8492386688108,12.5701186891328,36.2749756471256,81.3780710547364,44.2093739723382,41.4222033690884,29.8736437536012,23.3184669303881,77.136925636372,36.7372393715383,71.2034694473118,43.705908459252,23.3576886685817,25.2884321283897,24.936820879511,36.5453624486789,32.1888340344413,35.6555932415413,12.4107180341965,70.3847585718026,65.875507349099,57.0268199539111,51.8538974115882,48.4764891516514,45.7190134244542,48.7655388779482,31.1489570960995,20.6087807533951,9.94142900939081,45.6591280334194,106.007231145181,111.849939548998,122.115346280062,119.343676893424,105.597578431736,126.86317497606,129.55336291973,111.675201813382,60.8791984481535,64.230691395504,47.0856569735986,59.1957628647279,57.3127140979736,45.6022088652061,45.6518073952078,49.2729759857537,44.2319254233485,44.1591686251986,43.2136405778072,45.4954635730349,36.8015575749468,44.1484199751078,41.755939271903,46.7507608726276,57.3627870546485,21.0886655705361,20.185617737132,22.6644232091506,39.7970563706312,58.5569323407688,48.1688771822907,23.7948900777763,10.5330141847426,108.432353782477,112.779682944258,114.579102687879,98.6437266652767,86.3203974911009,104.999751737168,90.453015031062,74.3029985319964,94.7067634776988,92.1613354918239,75.764763736449,127.68795948833,95.9522864338234,90.4356987494054,96.2124416462439,115.269879798159,118.901999373864,122.178788942664,142.809048268358,133.676825023049,133.076632442376,120.343605804317,109.560563739762,106.153702687273,105.853569285195,103.83202469971,131.760478599301,118.253352144251,121.153254836172,114.226362024292,105.260860482323,116.956556259003,116.118424504345,111.044662307099,116.69563171501,112.960501535388,119.634894258793,111.541557649645,113.396435061295,125.695868851333,120.770448450409,122.539576075201,143.640096152561,113.258830906941,113.043274034949,161.627443925851,112.988966879132,120.112919212999,191.86219706505,126.398883155482,106.195468714153
|short_description=p1@Trim35
|short_description=p1@Trim35
}}
}}

Latest revision as of 07:06, 26 September 2015

Short description:p1@Trim35
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim35_5end
Coexpression cluster:MCL_coexpression_mm9:1662
Association with transcript: 0bp_to_ENSMUST00000022623, ENSMUST00000111119, uc007uke.1_5end
EntrezGene:Trim35
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim35

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G775.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.49
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E965.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F133.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E442.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E849.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A261.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A471.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A660.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A347.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H249.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I959.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.35
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8111.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9119.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3107.93
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7142.40
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2153.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8162.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3157.29
Mouse Astrocytes, donor2.CNhs12078.11552-120C4113.25
Mouse Astrocytes, donor3.CNhs12107.11633-122C4155.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A241.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I946.42
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C197.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1104.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5109.32
Mouse Granule cells, donor1.CNhs12131.11713-123C3209.40
Mouse Granule cells, donor2.CNhs12357.11731-123E3216.89
Mouse Granule cells, donor3.CNhs12108.11636-122C7201.56
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6150.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D196.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C785.94
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E794.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2100.89
Mouse Microglia, donor1.CNhs12629.11718-123C8137.22
Mouse Microglia, donor2.CNhs12634.11736-123E8123.33
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5143.20
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5169.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9156.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1140.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5144.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2155.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2142.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6161.78
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3106.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F378.91
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4230.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4204.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8208.89
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E490.18
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5104.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I684.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6151.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6131.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1165.52
Mouse Schwann, donor1.CNhs12507.11728-123D978.00
Mouse Schwann, donor2.CNhs12573.11746-123F993.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G394.21
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I776.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E388.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I879.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G675.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1112.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8112.11
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6120.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G238.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G338.93
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.56
accessory axillary lymph node, adult.CNhs10475.1063-29H936.25
adrenal gland, adult.CNhs10508.49-24D7104.21
adrenal gland, embryo E14.CNhs11038.406-44C5103.57
adrenal gland, embryo E16.CNhs11004.1254-43D6115.09
adrenal gland, embryo E17.CNhs11043.1263-45I1119.46
adrenal gland, embryo E18.CNhs11026.1262-18F5109.88
adrenal gland, neonate N00.CNhs11191.1311-23C1101.01
adrenal gland, neonate N25.CNhs11223.1377-27I3116.62
amnion, adult pregnant day17.5.CNhs10488.583-22A838.81
aorta, adult.CNhs10498.46-23H130.66
bone (os femoris), adult.CNhs10483.56-12G258.38
bone (os femoris), neonate N02.CNhs11227.1985-43F5181.18
bone (os femoris), neonate N16.CNhs11225.1525-43A679.94
bone (os femoris), neonate N20.CNhs11195.1350-25C360.61
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B255.63
cerebellum, neonate N30.CNhs11135.1395-42I266.81
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C734.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D439.26
corpora quadrigemina, adult.CNhs10501.16-22A471.45
corpus striatum, adult.CNhs10487.19-21D8124.90
corpus striatum, neonate N00.CNhs11226.630-43F1148.15
cortex, adult.CNhs10473.12-14D585.35
cortex, neonate N30.CNhs11107.1392-42F286.18
diencephalon, adult.CNhs10482.20-12F290.18
diencephalon, neonate N30.CNhs11201.1388-42B289.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B191.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A255.49
epididymis, adult.CNhs10490.58-23B260.91
eyeball, adult.CNhs10484.31-12G421.04
eyeball, embryo E12.CNhs11016.345-16C673.13
eyeball, embryo E14.CNhs10521.399-16E2100.01
eyeball, embryo E15.CNhs10593.426-16C977.79
eyeball, embryo E17.CNhs11023.1261-18D481.08
eyeball, neonate N00.CNhs11207.633-15C694.37
eyeball, neonate N01.CNhs11140.1532-43E790.96
eyeball, neonate N02.CNhs11205.1551-44G890.80
eyeball, neonate N16.CNhs11188.777-19A250.45
forelimb, embryo E11.CNhs10596.335-25E258.20
forelimb, embryo E12.CNhs10600.359-14H262.41
forelimb, embryo E13.CNhs10589.384-1E272.32
forelimb, embryo E14.CNhs10577.413-26A880.01
forelimb, embryo E15.CNhs11007.437-20E767.57
forelimb, embryo E17.CNhs10598.1517-43C491.94
forelimb, embryo E18.CNhs11008.1520-43B565.64
gonad, embryo E13.CNhs11044.1564-45I689.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D234.23
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D529.84
heart, embryo E11.CNhs10586.331-24E989.89
heart, embryo E12.CNhs11015.353-12F5102.96
heart, embryo E13.CNhs11013.376-3I993.63
heart, embryo E14.CNhs10597.403-26D4108.43
heart, embryo E15.CNhs11017.431-16C8109.99
heart, embryo E16.CNhs11021.457-17C6106.75
heart, embryo E17.CNhs11025.479-18E5107.43
heart, embryo E18.CNhs11030.1283-20G3138.16
heart, neonate N00.CNhs11213.639-21E3129.73
heart, neonate N03.CNhs11221.1349-25I2129.51
heart, neonate N10.CNhs11118.749-24G194.56
heart, neonate N16.CNhs11209.782-15G184.72
heart, neonate N20.CNhs11127.821-26I683.77
heart, neonate N25.CNhs11196.1351-25D367.40
heart, neonate N30.CNhs11202.1390-42D266.70
hippocampus, adult.CNhs10478.13-16E8102.20
hippocampus, neonate N00.CNhs11228.627-43G1155.59
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I567.83
intestine, embryo E13.CNhs11010.381-16D569.67
intestine, embryo E15.CNhs10602.976-16D859.28
intestine, embryo E16.CNhs10585.463-22H448.00
intestine, embryo E17.CNhs10582.482-18D346.48
intestine, embryo E18.CNhs10526.1289-20F744.13
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E938.21
intestine, neonate N06.CNhs11102.688-20B832.42
intestine, neonate N07.CNhs11095.720-20F232.43
intestine, neonate N10.CNhs11098.755-23A542.31
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G114.34
kidney, embryo E14.CNhs10606.411-4I983.26
kidney, embryo E15.CNhs10997.434-16F870.72
kidney, embryo E16.CNhs10584.464-22A567.62
kidney, embryo E17.CNhs11028.483-18I266.59
kidney, embryo E18.CNhs11001.1288-20C760.71
kidney, neonate N00.CNhs11214.646-21G768.10
kidney, neonate N10.CNhs11206.758-6D559.44
kidney, neonate N20.CNhs11113.832-19I134.69
kidney, neonate N25.CNhs11122.1353-25F335.48
kidney, neonate N30.CNhs11203.1385-42H134.06
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F829.70
liver, embryo E13.CNhs10524.378-3H630.27
liver, embryo E14.CNhs10594.409-16E121.59
liver, embryo E15.CNhs10520.433-16D718.87
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A323.17
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F420.10
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H228.28
liver, neonate N10.CNhs11115.751-24B920.59
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B161.34
lung, embryo E12.CNhs10522.354-16G287.36
lung, embryo E14.CNhs10604.404-26F870.07
lung, embryo E15.CNhs11020.432-17C575.54
lung, embryo E16.CNhs10998.458-17B679.09
lung, embryo E17.CNhs10605.480-44A674.37
lung, embryo E18.CNhs10583.1287-20I679.27
lung, neonate N00.CNhs11224.640-42C6113.57
lung, neonate N06.CNhs11212.683-20E5121.69
lung, neonate N07.CNhs11111.715-19A3119.37
lung, neonate N10.CNhs11219.750-23E6128.20
lung, neonate N20.CNhs11109.822-18A490.45
lung, neonate N25.CNhs11119.1359-25C778.05
lung, neonate N30.CNhs11133.1394-42H276.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.92
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H214.07
medulla oblongata, adult.CNhs10477.17-12C266.47
medulla oblongata, neonate N30.CNhs11200.1396-42A372.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C769.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2204.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E182.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E289.41
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3104.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7113.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8110.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9123.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4120.63
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5118.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6115.82
olfactory brain, adult.CNhs10489.18-22I978.72
ovary, adult.CNhs10507.91-2I777.93
ovary, embryo E18.CNhs11040.505-44H7103.63
ovary, neonate N00.CNhs11217.1299-22I493.17
oviduct, adult pregnant day01.CNhs10500.988-6G659.22
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F491.53
pancreas, embryo E15.CNhs11042.1556-45F281.02
pancreas, embryo E16.CNhs11003.460-26E544.70
pancreas, embryo E17.CNhs10599.1558-45G358.17
pancreas, embryo E18.CNhs10580.1535-43I760.56
pancreas, neonate N00.CNhs11105.645-26G961.51
pancreas, neonate N01.CNhs11138.1531-43D768.71
pancreas, neonate N02.CNhs11139.1539-43D860.96
pancreas, neonate N16.CNhs11136.787-43B629.39
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H526.82
pituitary gland, adult.CNhs10493.21-1G885.11
pituitary gland, embryo E12.CNhs11018.346-16E693.27
pituitary gland, embryo E13.CNhs11009.370-44C7113.71
pituitary gland, embryo E14.CNhs11037.398-44A5112.74
pituitary gland, embryo E15.CNhs10592.427-16B9104.81
pituitary gland, embryo E16.CNhs11036.449-43F6115.76
pituitary gland, embryo E17.CNhs11039.1265-44F5100.54
pituitary gland, neonate N00.CNhs11190.1308-22E9112.65
placenta, adult pregnant day10.CNhs10472.539-13I749.75
placenta, adult pregnant day17.CNhs10464.577-18G343.85
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C336.27
skin, neonate N00.CNhs11124.650-25G481.38
skin, neonate N03.CNhs11215.662-22H344.21
skin, neonate N06.CNhs11097.693-20I541.42
skin, neonate N10.CNhs11108.762-6C429.87
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C977.14
spleen, adult.CNhs10465.25-2G236.74
spleen, embryo E16.CNhs11035.461-43C171.20
spleen, embryo E18.CNhs11011.1271-21F243.71
spleen, neonate N10.CNhs11116.752-24D123.36
spleen, neonate N20.CNhs11112.824-19H125.29
spleen, neonate N25.CNhs11099.1354-25G324.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.66
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E370.38
stomach, embryo E15.CNhs10603.1252-16G865.88
stomach, embryo E16.CNhs11022.459-17D457.03
stomach, embryo E17.CNhs11006.1035-18D551.85
stomach, embryo E18.CNhs10999.1286-20C648.48
stomach, neonate N03.CNhs11193.1340-24B845.72
stomach, neonate N07.CNhs11210.718-18A948.77
stomach, neonate N25.CNhs11104.1355-25E431.15
stomach, neonate N30.CNhs11134.1386-42I120.61
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G545.66
testis, embryo E13.CNhs11031.389-23F5106.01
testis, embryo E15.CNhs11034.443-27C5111.85
testis, embryo E16.CNhs11033.470-26G5122.12
testis, embryo E17.CNhs11029.486-18I5119.34
testis, embryo E18.CNhs11027.503-18G5105.60
testis, neonate N00.CNhs11189.1300-22B7126.86
testis, neonate N07.CNhs11222.726-26I4129.55
testis, neonate N10.CNhs11204.763-44D9111.68
testis, neonate N20.CNhs11110.839-18H360.88
testis, neonate N30.CNhs11130.1391-42E264.23
thymus, adult.CNhs10471.38-12B547.09
thymus, embryo E14.CNhs11041.402-44I459.20
thymus, embryo E15.CNhs11005.430-45I257.31
thymus, embryo E16.CNhs11002.456-26C545.60
thymus, embryo E17.CNhs10581.478-18C145.65
thymus, embryo E18.CNhs10595.1273-19G449.27
thymus, neonate N02.CNhs11181.1541-43F844.23
thymus, neonate N03.CNhs11137.2104-43C744.16
thymus, neonate N06.CNhs11197.681-26C443.21
thymus, neonate N07.CNhs11211.713-19D345.50
thymus, neonate N10.CNhs11194.748-24E436.80
thymus, neonate N20.CNhs11186.820-7A244.15
thymus, neonate N25.CNhs11125.1362-25G741.76
thymus, neonate N30.CNhs11132.1393-42G246.75
tongue, adult.CNhs10499.32-1B457.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.66
urinary bladder, adult.CNhs10481.879-12E439.80
uterus, adult pregnant day19.CNhs10497.590-15F558.56
uterus, adult.CNhs10509.92-27E548.17
vagina, adult.CNhs10502.89-27D523.79
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1108.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2112.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3114.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D798.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A486.32
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5105.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A690.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A774.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A894.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.16
whole body, embryo E11.CNhs11014.324-5I875.76
whole body, embryo E12.CNhs10587.857-27C9127.69
whole body, embryo E13.CNhs10512.372-23H295.95
whole body, embryo E14.5.CNhs10578.420-27D290.44
whole body, embryo E14.CNhs10519.395-14B196.21
whole body, embryo E16.CNhs10514.453-14F2115.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5118.90
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5122.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5142.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5133.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5133.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5120.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5109.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5106.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5105.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5103.83
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5131.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5118.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5121.15
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5114.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5105.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5116.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5116.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5111.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5116.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5112.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5119.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5111.54
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5113.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5125.70
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5120.77
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5122.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5143.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5113.26
whole body, embryo E17.5.CNhs10513.490-9F9113.04
whole body, embryo E17.CNhs10517.475-3I5161.63
whole body, embryo E18.CNhs10516.493-3B3112.99
whole body, neonate N00.CNhs10525.657-19C2120.11
whole body, neonate N01.CNhs10576.659-23C6191.86
whole body, neonate N06.CNhs10515.692-21D1126.40
whole body, neonate N10.CNhs10518.761-6B4106.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell2.38e-1643
ectodermal cell4.32e-1644
neurectodermal cell4.32e-1644
electrically responsive cell1.75e-1339
electrically active cell1.75e-1339
neuron2.43e-1233
neuronal stem cell2.43e-1233
neuroblast2.43e-1233
electrically signaling cell2.43e-1233
CNS neuron (sensu Vertebrata)7.49e-1123
neuroblast (sensu Vertebrata)7.49e-1123
embryonic cell9.00e-0770

Uber anatomy
Ontology termp-valuen
central nervous system8.41e-1973
nervous system9.21e-1975
structure with developmental contribution from neural crest2.99e-1692
regional part of nervous system4.54e-1354
ectoderm-derived structure5.36e-1395
ectoderm5.36e-1395
presumptive ectoderm5.36e-1395
neural tube6.59e-1352
neural rod6.59e-1352
future spinal cord6.59e-1352
neural keel6.59e-1352
gray matter3.68e-1234
neurectoderm5.81e-1264
neural plate5.81e-1264
presumptive neural plate5.81e-1264
regional part of forebrain1.14e-1039
forebrain1.14e-1039
future forebrain1.14e-1039
anterior neural tube1.82e-1040
regional part of brain1.84e-1046
brain2.30e-1047
future brain2.30e-1047
brain grey matter1.80e-0929
regional part of telencephalon1.80e-0929
telencephalon1.80e-0929
pre-chordal neural plate2.56e-0949
ecto-epithelium6.28e-0973
cerebral cortex9.49e-0721
cerebral hemisphere9.49e-0721
pallium9.49e-0721
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