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FFCP PHASE1:Mm9::chr14:68334152..68334181,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=105440
|EntrezGene=105440
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q80UN1,E9PUA6
|UniProt=Q80UN1,E9PUA6
|association_with_transcript=0bp_to_ENSMUST00000078053,NM_001111028,NM_134073,uc007ulf.2,uc007ulg.2,uc011znv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000078053,NM_001111028,NM_134073,uc007ulf.2,uc007ulg.2,uc011znv.1_5end
|cluster_id=chr14:68334152..68334181,+
|description=CAGE_peak_3_at_Kctd9_5end
|description=CAGE_peak_3_at_Kctd9_5end
|id=chr14:68334152..68334181,+
|id=chr14:68334152..68334181,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,7.05e-09,3;CL:0002614,1.05e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.18e-09!63;UBERON:0002346!2.28e-07!71;UBERON:0003075!2.28e-07!71;UBERON:0007284!2.28e-07!71;UBERON:0000955!3.62e-07!50;UBERON:0006238!3.62e-07!50;UBERON:0002616!9.26e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.12e-13,54;UBERON:0000955,1.73e-12,47;UBERON:0006238,1.73e-12,47;UBERON:0002616,2.43e-11,46;UBERON:0001017,2.83e-11,73;UBERON:0001049,4.68e-11,52;UBERON:0005068,4.68e-11,52;UBERON:0006241,4.68e-11,52;UBERON:0007135,4.68e-11,52;UBERON:0002950,6.46e-11,4;UBERON:0001891,6.46e-11,4;UBERON:0009616,6.46e-11,4;UBERON:0010286,6.46e-11,4;UBERON:0001016,7.78e-11,75;UBERON:0002346,2.98e-09,64;UBERON:0003075,2.98e-09,64;UBERON:0007284,2.98e-09,64;UBERON:0004684,7.05e-09,3;UBERON:0002275,7.05e-09,3;UBERON:0002038,1.05e-08,3;UBERON:0009663,1.05e-08,3;UBERON:0009661,1.05e-08,3;UBERON:0000125,1.05e-08,3;UBERON:0002308,1.05e-08,3;UBERON:0004121,2.48e-08,95;UBERON:0000924,2.48e-08,95;UBERON:0006601,2.48e-08,95;UBERON:0010371,1.41e-07,73;UBERON:0003080,2.48e-07,40;UBERON:0004733,6.69e-07,6;UBERON:0004732,6.69e-07,6;UBERON:0002028,6.69e-07,6;UBERON:0007277,6.69e-07,6
|phase1_expression=0.640595388419176,0.697950815278722,0,0.90739263392049,2.00358291978539,0.671517087647559,0.233612640595526,0.129123323441576,0,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0,0,0.850432901510698,0.198581902401771,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0.7813353445238,0,1.17646297606203,1.36609096991689,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.420649922702764,0.856952953211411,0.662605622854841,0.367472397644862,0.670918297127655,1.83843757322004,8.8092704799511,5.87361755191863,4.6081959976873,0.923204014111357,0.731901148819277,1.04182674111352,6.97957497503452,5.06486349028512,3.0559649555362,0.883885756421003,0.854230084794618,0.186399445825301,0.454357159999104,0.453429360640713,0,0,0,1.07940638327563,0.649776417447669,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.251333182659351,0.988779870937496,0.578397427679647,0,0.485300549842228,0.883366073841574,1.45462575940567,1.86391761218122,1.46390398505774,1.67557365450764,0.255457055208591,0,0,0.254140454146129,2.54644086988199,0.915001205637253,0.376963056338593,0.695297280769106,0.767146371990992,1.66230435647648,3.0825839982874,0.203678727700633,0.497627882440372,0.505445516867349,0.631325567659422,0.780722657776222,0.919608417733892,0.360124259610698,0.753524089178575,0.408218994907967,0.640568601424249,1.12442069471675,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.467061369468678,0.658239399653922,0.820837320395476,0.729619285912702,1.16959989940266,0.658650345873152,0.939444931322602,1.26173969138476,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0,2.25415471346161,0.407302655690628,0.387904974335251,0.49095073923223,0.379419222745544,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0,0.538192240565737,0,0.184753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,0,0.478364305972461,0.327726629431476,0,0,0,0,0,0,5.13761887960934,4.45404409050372,0.163934945376675,0.757412781613119,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.709700426041343,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,0.329098041204242,0,0.938686832254841,0.42366414172764,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0.291480836629851,5.37733375830478,0.512612642393558,0,0.185194527369712,0.565105371014073,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0.785267825952089,0,0,1.12738587736838,0.598066184175915,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.704143431874524,1.0416350787516,0.943734099831398,2.65742532908607,1.15212002503146,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.457240839929999,0.504130925684203,0.584747284438515,0.0962118416403295,0,0.906921534460845,0,0.269141569828427,0.167884616364078,0,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.343706364687375,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0,0.31136204275253,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,1.2673964994512,0.565879024158229,0.468207537349412,0.640251524048693,0.516919220600519,0.476293691283074,0.579421629724277,1.7361829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|phase1_expression=0.640595388419176,0.697950815278722,0,0.90739263392049,2.00358291978539,0.671517087647559,0.233612640595526,0.129123323441576,0,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0.699561878128147,0.315462165358238,0,0,0.850432901510698,0.198581902401771,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0.7813353445238,0,1.17646297606203,1.36609096991689,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.420649922702764,0.856952953211411,0.662605622854841,0.367472397644862,0.670918297127655,1.83843757322004,8.8092704799511,5.87361755191863,4.6081959976873,0.923204014111357,0.731901148819277,1.04182674111352,6.97957497503452,5.06486349028512,3.0559649555362,0.883885756421003,0.854230084794618,0.186399445825301,0.454357159999104,0.453429360640713,0,0,0,1.07940638327563,0.649776417447669,0,0.983110940922263,0.170430322578058,0,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0,0.5709193985953,0.517875767294343,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.251333182659351,0.988779870937496,0.578397427679647,0,0.485300549842228,0.883366073841574,1.45462575940567,1.86391761218122,1.46390398505774,1.67557365450764,0.255457055208591,0,0,0.254140454146129,2.54644086988199,0.915001205637253,0.376963056338593,0.695297280769106,0.767146371990992,1.66230435647648,3.0825839982874,0.203678727700633,0.497627882440372,0.505445516867349,0.631325567659422,0.780722657776222,0.919608417733892,0.360124259610698,0.753524089178575,0.408218994907967,0.640568601424249,1.12442069471675,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.828503090142008,0.938104239924385,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.467061369468678,0.658239399653922,0.820837320395476,0.729619285912702,1.16959989940266,0.658650345873152,0.939444931322602,1.26173969138476,0.308713837137853,0.330418782983798,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0,2.25415471346161,0.407302655690628,0.387904974335251,0.49095073923223,0.379419222745544,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0,0.538192240565737,0,0.184753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,0,0.478364305972461,0.327726629431476,0,0,0,0,0,0,5.13761887960934,4.45404409050372,0.163934945376675,0.757412781613119,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.709700426041343,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,0.329098041204242,0,0.938686832254841,0.42366414172764,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0.820704498725306,0.291480836629851,5.37733375830478,0.512612642393558,0,0.185194527369712,0.565105371014073,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0.785267825952089,0,0,1.12738587736838,0.598066184175915,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.704143431874524,1.0416350787516,0.943734099831398,2.65742532908607,1.15212002503146,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.457240839929999,0.504130925684203,0.584747284438515,0.0962118416403295,0,0.906921534460845,0,0.269141569828427,0.167884616364078,0,0.750729901804728,0.549454872801795,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.343706364687375,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0,0.31136204275253,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,1.2673964994512,0.565879024158229,0.468207537349412,0.640251524048693,0.516919220600519,0.476293691283074,0.579421629724277,1.7361829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|short_description=p3@Kctd9
|short_description=p3@Kctd9
}}
}}

Latest revision as of 07:25, 26 September 2015

Short description:p3@Kctd9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Kctd9_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_ENSMUST00000078053, NM_001111028, NM_134073, uc007ulf.2, uc007ulg.2, uc011znv.1_5end
EntrezGene:Kctd9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Kctd9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron7.05e-093
neuron of the substantia nigra1.05e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.12e-1354
brain1.73e-1247
future brain1.73e-1247
regional part of brain2.43e-1146
central nervous system2.83e-1173
neural tube4.68e-1152
neural rod4.68e-1152
future spinal cord4.68e-1152
neural keel4.68e-1152
regional part of midbrain6.46e-114
midbrain6.46e-114
presumptive midbrain6.46e-114
midbrain neural tube6.46e-114
nervous system7.78e-1175
neurectoderm2.98e-0964
neural plate2.98e-0964
presumptive neural plate2.98e-0964
raphe nuclei7.05e-093
reticular formation7.05e-093
substantia nigra1.05e-083
telencephalic nucleus1.05e-083
midbrain nucleus1.05e-083
neural nucleus1.05e-083
nucleus of brain1.05e-083
ectoderm-derived structure2.48e-0895
ectoderm2.48e-0895
presumptive ectoderm2.48e-0895
ecto-epithelium1.41e-0773
anterior neural tube2.48e-0740
segmental subdivision of hindbrain6.69e-076
segmental subdivision of nervous system6.69e-076
hindbrain6.69e-076
presumptive hindbrain6.69e-076
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