FFCP PHASE1:Mm9::chr14:79050344..79050355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:79050344..79050355,- | |||
|description=CAGE_peak_at_chr14:79050344..79050355,- | |description=CAGE_peak_at_chr14:79050344..79050355,- | ||
|id=chr14:79050344..79050355,- | |id=chr14:79050344..79050355,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease=DOID:0060100!4.44e-09!3;DOID:4045!4.44e-09!3 | |ontology_enrichment_disease=DOID:0060100!4.44e-09!3;DOID:4045!4.44e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.24e-09,3;DOID:4045,4.24e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002021!6.74e-28!10;UBERON:0000411!6.74e-28!10;UBERON:0001950!6.74e-28!10;UBERON:0002619!1.19e-18!17;UBERON:0000956!1.40e-17!21;UBERON:0001869!1.40e-17!21;UBERON:0000203!1.40e-17!21;UBERON:0002791!4.01e-14!29;UBERON:0003528!4.01e-14!29;UBERON:0001893!4.01e-14!29;UBERON:0002780!3.57e-13!39;UBERON:0001890!3.57e-13!39;UBERON:0006240!3.57e-13!39;UBERON:0003080!9.28e-13!40;UBERON:0002020!1.28e-11!34;UBERON:0002616!3.37e-11!49;UBERON:0000955!6.65e-11!50;UBERON:0006238!6.65e-11!50;UBERON:0003056!8.49e-10!49;UBERON:0000033!4.31e-09!63;UBERON:0001049!4.85e-09!52;UBERON:0005068!4.85e-09!52;UBERON:0006241!4.85e-09!52;UBERON:0007135!4.85e-09!52;UBERON:0007811!2.44e-08!86;UBERON:0000153!2.92e-07!94;UBERON:0000073!5.49e-07!75;UBERON:0001016!5.49e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.44e-50,10;UBERON:0000411,1.44e-50,10;UBERON:0001950,1.44e-50,10;UBERON:0002619,1.89e-29,17;UBERON:0000956,3.27e-29,21;UBERON:0001869,3.27e-29,21;UBERON:0000203,3.27e-29,21;UBERON:0003528,6.88e-21,29;UBERON:0002791,6.88e-21,29;UBERON:0001893,6.88e-21,29;UBERON:0002020,1.14e-17,34;UBERON:0002780,2.87e-15,39;UBERON:0001890,2.87e-15,39;UBERON:0006240,2.87e-15,39;UBERON:0003080,7.35e-15,40;UBERON:0002616,8.83e-13,46;UBERON:0000955,1.74e-12,47;UBERON:0006238,1.74e-12,47;UBERON:0003056,6.26e-12,49;UBERON:0001049,3.54e-11,52;UBERON:0005068,3.54e-11,52;UBERON:0006241,3.54e-11,52;UBERON:0007135,3.54e-11,52;UBERON:0000073,1.01e-10,54;UBERON:0002346,7.27e-09,64;UBERON:0003075,7.27e-09,64;UBERON:0007284,7.27e-09,64;UBERON:0001851,7.32e-08,1;UBERON:0005889,7.32e-08,1;UBERON:0010371,1.26e-07,73;UBERON:0001017,1.26e-07,73;UBERON:0001016,2.18e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,2.43354048269187,3.83573185995496,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,2.76195141904306,0.572895513439397,2.40594455281163,6.16574267793578,3.0215755895588,2.02506750069542,3.15224842256954,5.43770890781046,5.1776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,2.43354048269187,3.83573185995496,0.20778804455956,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0,1.6942555278512,2.76195141904306,0.572895513439397,2.40594455281163,6.16574267793578,3.0215755895588,2.02506750069542,3.15224842256954,5.43770890781046,5.1776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:79050344..79050355,- | |short_description=p@chr14:79050344..79050355,- | ||
}} | }} |
Latest revision as of 20:41, 4 August 2015
Short description: | p@chr14:79050344..79050355, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:79050344..79050355, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.44e-50 | 10 |
visual cortex | 1.44e-50 | 10 |
neocortex | 1.44e-50 | 10 |
regional part of cerebral cortex | 1.89e-29 | 17 |
cerebral cortex | 3.27e-29 | 21 |
cerebral hemisphere | 3.27e-29 | 21 |
pallium | 3.27e-29 | 21 |
brain grey matter | 6.88e-21 | 29 |
regional part of telencephalon | 6.88e-21 | 29 |
telencephalon | 6.88e-21 | 29 |
gray matter | 1.14e-17 | 34 |
regional part of forebrain | 2.87e-15 | 39 |
forebrain | 2.87e-15 | 39 |
future forebrain | 2.87e-15 | 39 |
anterior neural tube | 7.35e-15 | 40 |
regional part of brain | 8.83e-13 | 46 |
brain | 1.74e-12 | 47 |
future brain | 1.74e-12 | 47 |
pre-chordal neural plate | 6.26e-12 | 49 |
neural tube | 3.54e-11 | 52 |
neural rod | 3.54e-11 | 52 |
future spinal cord | 3.54e-11 | 52 |
neural keel | 3.54e-11 | 52 |
regional part of nervous system | 1.01e-10 | 54 |
neurectoderm | 7.27e-09 | 64 |
neural plate | 7.27e-09 | 64 |
presumptive neural plate | 7.27e-09 | 64 |
cortex | 7.32e-08 | 1 |
zygote cortex | 7.32e-08 | 1 |
ecto-epithelium | 1.26e-07 | 73 |
central nervous system | 1.26e-07 | 73 |
nervous system | 2.18e-07 | 75 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.24e-09 | 3 |
muscle cancer | 4.24e-09 | 3 |