FFCP PHASE1:Mm9::chr15:78034578..78034628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19293 | |EntrezGene=19293 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=P32848,Q545M7 | |UniProt=P32848,Q545M7 | ||
|association_with_transcript=0bp_to_NM_013645,uc007wot.1_5end | |association_with_transcript=0bp_to_NM_013645,uc007wot.1_5end | ||
|cluster_id=chr15:78034578..78034628,- | |||
|description=CAGE_peak_2_at_Pvalb_5end | |description=CAGE_peak_2_at_Pvalb_5end | ||
|id=chr15:78034578..78034628,- | |id=chr15:78034578..78034628,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.27e-11!63;UBERON:0004121!3.88e-11!102;UBERON:0000924!3.88e-11!102;UBERON:0006601!3.88e-11!102;UBERON:0000073!7.16e-11!75;UBERON:0001016!7.16e-11!75;UBERON:0001017!9.78e-11!73;UBERON:0005743!9.78e-11!73;UBERON:0000955!6.72e-10!50;UBERON:0006238!6.72e-10!50;UBERON:0001049!8.51e-10!52;UBERON:0005068!8.51e-10!52;UBERON:0006241!8.51e-10!52;UBERON:0007135!8.51e-10!52;UBERON:0002616!1.14e-09!49;UBERON:0002346!2.65e-08!71;UBERON:0003075!2.65e-08!71;UBERON:0007284!2.65e-08!71;UBERON:0007811!4.28e-08!86;UBERON:0002021!2.73e-07!10;UBERON:0000411!2.73e-07!10;UBERON:0001950!2.73e-07!10;UBERON:0000153!3.93e-07!94;UBERON:0003056!6.40e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.61e-14,95;UBERON:0000924,3.61e-14,95;UBERON:0006601,3.61e-14,95;UBERON:0010371,5.91e-13,73;UBERON:0001017,1.53e-12,73;UBERON:0000073,1.73e-12,54;UBERON:0001016,8.65e-12,75;UBERON:0001049,4.29e-11,52;UBERON:0005068,4.29e-11,52;UBERON:0006241,4.29e-11,52;UBERON:0007135,4.29e-11,52;UBERON:0002346,9.48e-11,64;UBERON:0003075,9.48e-11,64;UBERON:0007284,9.48e-11,64;UBERON:0000955,3.31e-09,47;UBERON:0006238,3.31e-09,47;UBERON:0002616,6.14e-09,46;UBERON:0002021,9.44e-09,10;UBERON:0000411,9.44e-09,10;UBERON:0001950,9.44e-09,10;UBERON:0010314,9.15e-08,92;UBERON:0003056,2.14e-07,49 | |||
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| ||
|short_description=p2@Pvalb | |short_description=p2@Pvalb | ||
}} | }} |
Latest revision as of 01:47, 27 September 2015
Short description: | p2@Pvalb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pvalb_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_NM_013645, uc007wot.1_5end |
EntrezGene: | Pvalb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.61e-14 | 95 |
ectoderm | 3.61e-14 | 95 |
presumptive ectoderm | 3.61e-14 | 95 |
ecto-epithelium | 5.91e-13 | 73 |
central nervous system | 1.53e-12 | 73 |
regional part of nervous system | 1.73e-12 | 54 |
nervous system | 8.65e-12 | 75 |
neural tube | 4.29e-11 | 52 |
neural rod | 4.29e-11 | 52 |
future spinal cord | 4.29e-11 | 52 |
neural keel | 4.29e-11 | 52 |
neurectoderm | 9.48e-11 | 64 |
neural plate | 9.48e-11 | 64 |
presumptive neural plate | 9.48e-11 | 64 |
brain | 3.31e-09 | 47 |
future brain | 3.31e-09 | 47 |
regional part of brain | 6.14e-09 | 46 |
occipital lobe | 9.44e-09 | 10 |
visual cortex | 9.44e-09 | 10 |
neocortex | 9.44e-09 | 10 |
structure with developmental contribution from neural crest | 9.15e-08 | 92 |
pre-chordal neural plate | 2.14e-07 | 49 |