FFCP PHASE1:Hg19::chr10:73578451..73578484,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73578451..73578484,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr10:73578451..73578484,- | |description=CAGE_peak_at_chr10:73578451..73578484,- | ||
|id=chr10:73578451..73578484,- | |id=chr10:73578451..73578484,- | ||
|ontology_enrichment_celltype=CL:0000766!7.73e-25!76;CL:0002057!2.81e-23!42;CL:0002194!3.91e-23!63;CL:0000576!3.91e-23!63;CL:0000040!3.91e-23!63;CL:0000559!3.91e-23!63;CL:0000839!1.03e-22!70;CL:0002009!4.13e-21!65;CL:0000557!4.37e-21!71;CL:0000860!3.50e-20!45;CL:0000763!1.08e-08!112;CL:0000049!1.08e-08!112 | |ontology_enrichment_celltype=CL:0000766!7.73e-25!76;CL:0002057!2.81e-23!42;CL:0002194!3.91e-23!63;CL:0000576!3.91e-23!63;CL:0000040!3.91e-23!63;CL:0000559!3.91e-23!63;CL:0000839!1.03e-22!70;CL:0002009!4.13e-21!65;CL:0000557!4.37e-21!71;CL:0000860!3.50e-20!45;CL:0000763!1.08e-08!112;CL:0000049!1.08e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.92e-27;39!CL:0000234;5.92e-27;39!CL:0000860;1.24e-26;33!CL:0002057;1.24e-26;33!CL:0000576;3.87e-22;48!CL:0000766;5.73e-18;69!CL:0000763;1.68e-07;100!CL:0000235;3.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.23e-41,72;CL:0000473,1.72e-39,48;CL:0000234,1.72e-39,48;CL:0002194,2.26e-38,59;CL:0000576,2.26e-38,59;CL:0000040,2.26e-38,59;CL:0000559,2.26e-38,59;CL:0000839,2.41e-38,66;CL:0000557,2.08e-37,67;CL:0002009,2.30e-36,61;CL:0000860,1.34e-33,42;CL:0002057,1.34e-33,42;CL:0000763,3.59e-20,108;CL:0000049,3.59e-20,108;CL:0000738,1.04e-11,136;CL:0002031,2.31e-11,120;CL:0002087,1.32e-10,115;CL:0000134,1.56e-09,354;CL:0002320,1.75e-09,361;CL:0000048,8.50e-09,427;CL:0000219,1.41e-08,386;CL:0000723,3.67e-08,433;CL:0000034,2.31e-07,441;CL:0000235,2.95e-07,6;CL:0002032,6.59e-07,161;CL:0000837,6.59e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.62e-16!80;UBERON:0001474!1.04e-14!86;UBERON:0002193!2.03e-14!112;UBERON:0002390!4.92e-14!102;UBERON:0003061!4.92e-14!102;UBERON:0002405!2.54e-13!115;UBERON:0004765!6.77e-12!101;UBERON:0001434!6.77e-12!101;UBERON:0003081!1.83e-11!216;UBERON:0000926!1.05e-07!448;UBERON:0004120!1.05e-07!448;UBERON:0006603!1.05e-07!448;UBERON:0000467!2.54e-07!625;UBERON:0000480!2.59e-07!626;UBERON:0002204!4.14e-07!167;UBERON:0000468!5.34e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-31,76;UBERON:0001474,2.20e-28,82;UBERON:0002405,1.06e-26,93;UBERON:0002390,2.51e-26,98;UBERON:0003061,2.51e-26,98;UBERON:0002193,8.44e-26,108;UBERON:0004765,7.04e-25,90;UBERON:0001434,4.17e-22,100;UBERON:0003081,5.20e-22,203;UBERON:0000926,2.59e-20,315;UBERON:0004120,2.59e-20,315;UBERON:0006603,2.59e-20,315;UBERON:0002204,1.64e-12,167;UBERON:0002384,5.35e-09,371 | |||
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| ||
|short_description=p@chr10:73578451..73578484,- | |short_description=p@chr10:73578451..73578484,- | ||
}} | }} |
Latest revision as of 15:18, 23 July 2015
Short description: | p@chr10:73578451..73578484, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73578451..73578484, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.23e-41 | 72 |
defensive cell | 1.72e-39 | 48 |
phagocyte | 1.72e-39 | 48 |
monopoietic cell | 2.26e-38 | 59 |
monocyte | 2.26e-38 | 59 |
monoblast | 2.26e-38 | 59 |
promonocyte | 2.26e-38 | 59 |
myeloid lineage restricted progenitor cell | 2.41e-38 | 66 |
granulocyte monocyte progenitor cell | 2.08e-37 | 67 |
macrophage dendritic cell progenitor | 2.30e-36 | 61 |
classical monocyte | 1.34e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-33 | 42 |
myeloid cell | 3.59e-20 | 108 |
common myeloid progenitor | 3.59e-20 | 108 |
leukocyte | 1.04e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 2.31e-11 | 120 |
nongranular leukocyte | 1.32e-10 | 115 |
mesenchymal cell | 1.56e-09 | 354 |
connective tissue cell | 1.75e-09 | 361 |
multi fate stem cell | 8.50e-09 | 427 |
motile cell | 1.41e-08 | 386 |
somatic stem cell | 3.67e-08 | 433 |
stem cell | 2.31e-07 | 441 |
macrophage | 2.95e-07 | 6 |
hematopoietic oligopotent progenitor cell | 6.59e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.59e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-31 | 76 |
bone element | 2.20e-28 | 82 |
immune system | 1.06e-26 | 93 |
hematopoietic system | 2.51e-26 | 98 |
blood island | 2.51e-26 | 98 |
hemolymphoid system | 8.44e-26 | 108 |
skeletal element | 7.04e-25 | 90 |
skeletal system | 4.17e-22 | 100 |
lateral plate mesoderm | 5.20e-22 | 203 |
mesoderm | 2.59e-20 | 315 |
mesoderm-derived structure | 2.59e-20 | 315 |
presumptive mesoderm | 2.59e-20 | 315 |
musculoskeletal system | 1.64e-12 | 167 |
connective tissue | 5.35e-09 | 371 |