FFCP PHASE1:Mm9::chr16:38452692..38452755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11544 | |EntrezGene=11544 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P54923,Q3U5N4 | |UniProt=P54923,Q3U5N4 | ||
|association_with_transcript=13bp_to_ENSMUST00000002923,NM_007414,uc007zex.1_5end | |association_with_transcript=13bp_to_ENSMUST00000002923,NM_007414,uc007zex.1_5end | ||
|cluster_id=chr16:38452692..38452755,- | |||
|description=CAGE_peak_1_at_Adprh_5end | |description=CAGE_peak_1_at_Adprh_5end | ||
|id=chr16:38452692..38452755,- | |id=chr16:38452692..38452755,- | ||
|ontology_enrichment_celltype=CL:0000221!3.14e-15!44;CL:0000133!3.14e-15!44;CL:0002319!4.13e-15!43;CL:0000055!7.82e-13!50;CL:0000117!1.82e-12!23;CL:0000337!1.82e-12!23;CL:0000540!1.82e-11!33;CL:0000047!1.82e-11!33;CL:0000031!1.82e-11!33;CL:0000404!1.82e-11!33;CL:0000393!3.23e-10!39;CL:0000211!3.23e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.14e-15,44;CL:0000133,3.14e-15,44;CL:0002319,4.13e-15,43;CL:0000117,1.82e-12,23;CL:0000337,1.82e-12,23;CL:0000540,1.82e-11,33;CL:0000047,1.82e-11,33;CL:0000031,1.82e-11,33;CL:0000404,1.82e-11,33;CL:0000393,3.23e-10,39;CL:0000211,3.23e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-22!75;UBERON:0001016!3.24e-22!75;UBERON:0001017!1.12e-21!73;UBERON:0005743!1.12e-21!73;UBERON:0004121!5.64e-20!102;UBERON:0000924!5.64e-20!102;UBERON:0006601!5.64e-20!102;UBERON:0002346!4.22e-19!71;UBERON:0003075!4.22e-19!71;UBERON:0007284!4.22e-19!71;UBERON:0001049!2.05e-16!52;UBERON:0005068!2.05e-16!52;UBERON:0006241!2.05e-16!52;UBERON:0007135!2.05e-16!52;UBERON:0002616!4.60e-15!49;UBERON:0000955!4.63e-15!50;UBERON:0006238!4.63e-15!50;UBERON:0000033!4.79e-15!63;UBERON:0003056!8.53e-13!49;UBERON:0003080!4.71e-12!40;UBERON:0002780!7.89e-12!39;UBERON:0001890!7.89e-12!39;UBERON:0006240!7.89e-12!39;UBERON:0002020!7.45e-11!34;UBERON:0000153!1.91e-09!94;UBERON:0007811!2.17e-08!86;UBERON:0002791!2.27e-08!29;UBERON:0003528!2.27e-08!29;UBERON:0001893!2.27e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.24e-22,75;UBERON:0010314,5.23e-22,92;UBERON:0001017,1.12e-21,73;UBERON:0000073,8.28e-18,54;UBERON:0004121,1.35e-17,95;UBERON:0000924,1.35e-17,95;UBERON:0006601,1.35e-17,95;UBERON:0002346,7.27e-17,64;UBERON:0003075,7.27e-17,64;UBERON:0007284,7.27e-17,64;UBERON:0001049,2.05e-16,52;UBERON:0005068,2.05e-16,52;UBERON:0006241,2.05e-16,52;UBERON:0007135,2.05e-16,52;UBERON:0000955,1.67e-13,47;UBERON:0006238,1.67e-13,47;UBERON:0002616,1.68e-13,46;UBERON:0003056,8.53e-13,49;UBERON:0010371,1.53e-12,73;UBERON:0003080,4.71e-12,40;UBERON:0002780,7.89e-12,39;UBERON:0001890,7.89e-12,39;UBERON:0006240,7.89e-12,39;UBERON:0002020,7.45e-11,34;UBERON:0003528,2.27e-08,29;UBERON:0002791,2.27e-08,29;UBERON:0001893,2.27e-08,29 | |||
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| ||
|short_description=p1@Adprh | |short_description=p1@Adprh | ||
}} | }} |
Latest revision as of 23:57, 1 October 2015
Short description: | p1@Adprh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adprh_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000002923, NM_007414, uc007zex.1_5end |
EntrezGene: | Adprh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.14e-15 | 44 |
neurectodermal cell | 3.14e-15 | 44 |
neural cell | 4.13e-15 | 43 |
CNS neuron (sensu Vertebrata) | 1.82e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-12 | 23 |
neuron | 1.82e-11 | 33 |
neuronal stem cell | 1.82e-11 | 33 |
neuroblast | 1.82e-11 | 33 |
electrically signaling cell | 1.82e-11 | 33 |
electrically responsive cell | 3.23e-10 | 39 |
electrically active cell | 3.23e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.24e-22 | 75 |
structure with developmental contribution from neural crest | 5.23e-22 | 92 |
central nervous system | 1.12e-21 | 73 |
regional part of nervous system | 8.28e-18 | 54 |
ectoderm-derived structure | 1.35e-17 | 95 |
ectoderm | 1.35e-17 | 95 |
presumptive ectoderm | 1.35e-17 | 95 |
neurectoderm | 7.27e-17 | 64 |
neural plate | 7.27e-17 | 64 |
presumptive neural plate | 7.27e-17 | 64 |
neural tube | 2.05e-16 | 52 |
neural rod | 2.05e-16 | 52 |
future spinal cord | 2.05e-16 | 52 |
neural keel | 2.05e-16 | 52 |
brain | 1.67e-13 | 47 |
future brain | 1.67e-13 | 47 |
regional part of brain | 1.68e-13 | 46 |
pre-chordal neural plate | 8.53e-13 | 49 |
ecto-epithelium | 1.53e-12 | 73 |
anterior neural tube | 4.71e-12 | 40 |
regional part of forebrain | 7.89e-12 | 39 |
forebrain | 7.89e-12 | 39 |
future forebrain | 7.89e-12 | 39 |
gray matter | 7.45e-11 | 34 |
brain grey matter | 2.27e-08 | 29 |
regional part of telencephalon | 2.27e-08 | 29 |
telencephalon | 2.27e-08 | 29 |