FFCP PHASE1:Hg19::chr11:111957451..111957493,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26521 | |EntrezGene=26521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11818 | |HGNC=11818 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001pmx.2,uc001pmy.2_5end | |association_with_transcript=0bp_to_uc001pmx.2,uc001pmy.2_5end | ||
|cluster_id=chr11:111957451..111957493,- | |||
|description=CAGE_peak_1_at_TIMM8B_5end | |description=CAGE_peak_1_at_TIMM8B_5end | ||
|id=chr11:111957451..111957493,- | |id=chr11:111957451..111957493,- | ||
|ontology_enrichment_celltype=CL:0002321!2.98e-20!248;CL:0000220!3.32e-20!246;CL:0000222!6.65e-16!119;CL:0000548!3.30e-15!679;CL:0000004!3.30e-15!679;CL:0000255!3.30e-15!679;CL:0000012!1.10e-14!682;CL:0000183!2.83e-11!59;CL:0000144!5.16e-11!625;CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000055!1.26e-09!180;CL:0000680!1.76e-09!57;CL:0000056!1.76e-09!57;CL:0000355!1.76e-09!57;CL:0002371!2.47e-09!591;CL:0000187!2.64e-09!54;CL:0000115!3.15e-08!35;CL:0002078!3.53e-08!44;CL:0000066!3.83e-08!254;CL:0000071!1.01e-07!18;CL:0002546!1.01e-07!18;CL:0000192!1.96e-07!42;CL:0000514!1.96e-07!42;CL:0000003!2.18e-07!722 | |ontology_enrichment_celltype=CL:0002321!2.98e-20!248;CL:0000220!3.32e-20!246;CL:0000222!6.65e-16!119;CL:0000548!3.30e-15!679;CL:0000004!3.30e-15!679;CL:0000255!3.30e-15!679;CL:0000012!1.10e-14!682;CL:0000183!2.83e-11!59;CL:0000144!5.16e-11!625;CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000055!1.26e-09!180;CL:0000680!1.76e-09!57;CL:0000056!1.76e-09!57;CL:0000355!1.76e-09!57;CL:0002371!2.47e-09!591;CL:0000187!2.64e-09!54;CL:0000115!3.15e-08!35;CL:0002078!3.53e-08!44;CL:0000066!3.83e-08!254;CL:0000071!1.01e-07!18;CL:0002546!1.01e-07!18;CL:0000192!1.96e-07!42;CL:0000514!1.96e-07!42;CL:0000003!2.18e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000071;9.94e-08;18!CL:0000115;1.67e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.51e-21,250;CL:0000222,1.69e-16,121;CL:0000393,8.30e-11,61;CL:0000211,8.30e-11,61;CL:0000680,1.23e-09,58;CL:0000056,1.23e-09,58;CL:0000355,1.23e-09,58;CL:0000187,1.84e-09,55;CL:0000115,1.12e-08,36;CL:0002078,1.34e-08,45;CL:0000066,5.11e-08,253;CL:0000071,1.01e-07,18;CL:0002546,1.01e-07,18;CL:0000192,1.38e-07,43;CL:0000514,1.38e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;9.94e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!5.86e-15!138;UBERON:0003914!8.58e-15!118;UBERON:0005256!3.21e-11!143;UBERON:0002049!5.89e-11!79;UBERON:0007798!5.89e-11!79;UBERON:0003104!7.67e-11!238;UBERON:0009142!7.67e-11!238;UBERON:0004872!3.66e-10!84;UBERON:0001134!7.72e-10!61;UBERON:0002036!7.72e-10!61;UBERON:0003082!7.72e-10!61;UBERON:0004290!8.88e-10!70;UBERON:0001981!1.82e-09!60;UBERON:0007500!1.82e-09!60;UBERON:0004537!1.82e-09!60;UBERON:0006965!1.82e-09!60;UBERON:0000914!2.60e-09!83;UBERON:0002329!2.60e-09!83;UBERON:0003077!2.60e-09!83;UBERON:0003059!2.60e-09!83;UBERON:0007282!2.60e-09!83;UBERON:0009618!2.60e-09!83;UBERON:0007285!2.60e-09!83;UBERON:0000055!3.98e-09!69;UBERON:0002385!6.58e-09!63;UBERON:0001015!6.58e-09!63;UBERON:0000383!6.58e-09!63;UBERON:0002100!1.01e-08!216;UBERON:0001009!1.04e-08!113;UBERON:0003103!3.52e-08!69;UBERON:0001986!1.01e-07!18;UBERON:0004638!1.01e-07!18;UBERON:0004852!1.01e-07!18;UBERON:0004535!1.06e-07!110;UBERON:0000487!1.39e-07!22;UBERON:0001637!1.53e-07!42;UBERON:0003509!1.53e-07!42;UBERON:0004572!1.53e-07!42;UBERON:0000486!2.30e-07!82;UBERON:0006914!3.07e-07!25;UBERON:0007100!6.53e-07!27;UBERON:0001737!9.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;9.01e-08;33!UBERON:0004638;9.94e-08;18!UBERON:0001986;9.94e-08;18!UBERON:0004852;9.94e-08;18!UBERON:0000487;1.34e-07;22!UBERON:0006914;3.00e-07;25!UBERON:0001737;9.37e-07;9!UBERON:0001557;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,2.51e-15,148;UBERON:0003914,1.27e-14,117;UBERON:0007503,1.02e-12,78;UBERON:0003104,3.50e-12,160;UBERON:0009142,3.50e-12,160;UBERON:0002049,4.04e-11,78;UBERON:0007798,4.04e-11,78;UBERON:0005256,1.91e-10,122;UBERON:0004872,2.63e-10,83;UBERON:0001134,5.37e-10,62;UBERON:0002036,5.37e-10,62;UBERON:0003082,5.37e-10,62;UBERON:0002329,6.18e-10,71;UBERON:0003059,6.18e-10,71;UBERON:0007282,6.18e-10,71;UBERON:0004290,6.18e-10,71;UBERON:0009618,6.18e-10,71;UBERON:0007500,1.19e-09,59;UBERON:0001981,1.19e-09,59;UBERON:0004537,1.19e-09,59;UBERON:0006965,1.19e-09,59;UBERON:0007524,1.25e-09,73;UBERON:0003077,1.66e-09,72;UBERON:0007285,1.66e-09,72;UBERON:0000055,2.78e-09,68;UBERON:0002385,4.60e-09,64;UBERON:0001015,4.60e-09,64;UBERON:0000383,4.60e-09,64;UBERON:0002100,4.79e-09,199;UBERON:0001009,8.31e-09,112;UBERON:0003103,4.99e-08,68;UBERON:0004535,8.63e-08,109;UBERON:0004638,1.01e-07,18;UBERON:0001986,1.01e-07,18;UBERON:0004852,1.01e-07,18;UBERON:0000487,1.39e-07,22;UBERON:0001637,1.53e-07,42;UBERON:0003509,1.53e-07,42;UBERON:0004572,1.53e-07,42;UBERON:0000486,1.65e-07,83;UBERON:0006914,3.07e-07,25;UBERON:0007100,6.53e-07,27;UBERON:0001737,9.35e-07,9 | |||
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| ||
|short_description=p1@TIMM8B | |short_description=p1@TIMM8B | ||
}} | }} |
Latest revision as of 04:54, 25 September 2015
Short description: | p1@TIMM8B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMM8B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001pmx.2, uc001pmy.2_5end |
EntrezGene: | TIMM8B |
HGNC: | 11818 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.51e-21 | 250 |
mesodermal cell | 1.69e-16 | 121 |
electrically responsive cell | 8.30e-11 | 61 |
electrically active cell | 8.30e-11 | 61 |
muscle precursor cell | 1.23e-09 | 58 |
myoblast | 1.23e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-09 | 58 |
muscle cell | 1.84e-09 | 55 |
endothelial cell | 1.12e-08 | 36 |
meso-epithelial cell | 1.34e-08 | 45 |
epithelial cell | 5.11e-08 | 253 |
blood vessel endothelial cell | 1.01e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.01e-07 | 18 |
smooth muscle cell | 1.38e-07 | 43 |
smooth muscle myoblast | 1.38e-07 | 43 |