FFCP PHASE1:Mm9::chr17:35972855..35972872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=971 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:35972855..35972872,- | |||
|description=CAGE_peak_at_chr17:35972855..35972872,- | |description=CAGE_peak_at_chr17:35972855..35972872,- | ||
|id=chr17:35972855..35972872,- | |id=chr17:35972855..35972872,- | ||
|ontology_enrichment_celltype=CL:0002319!1.30e-14!43;CL:0000221!3.18e-14!44;CL:0000133!3.18e-14!44;CL:0000055!1.09e-13!50;CL:0000540!5.43e-12!33;CL:0000047!5.43e-12!33;CL:0000031!5.43e-12!33;CL:0000404!5.43e-12!33;CL:0000393!7.28e-12!39;CL:0000211!7.28e-12!39;CL:0000034!3.10e-11!97;CL:0000117!8.87e-11!23;CL:0000337!8.87e-11!23;CL:0000548!1.26e-10!115;CL:0000004!1.26e-10!115;CL:0000255!1.26e-10!115;CL:0000723!1.31e-10!91;CL:0000048!1.31e-10!91;CL:0002371!4.49e-10!118;CL:0000144!7.01e-10!121;CL:0000012!7.01e-10!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,7.93e-19,91;CL:0000048,7.93e-19,91;CL:0000034,5.33e-18,97;CL:0000117,8.41e-18,23;CL:0000337,8.41e-18,23;CL:0000540,7.85e-17,33;CL:0000047,7.85e-17,33;CL:0000031,7.85e-17,33;CL:0000404,7.85e-17,33;CL:0000393,5.27e-16,39;CL:0000211,5.27e-16,39;CL:0002319,2.73e-15,43;CL:0000221,9.14e-15,44;CL:0000133,9.14e-15,44;CL:0002321,6.83e-11,70;CL:0002609,8.13e-10,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-08!75;UBERON:0001016!1.09e-08!75;UBERON:0002020!1.72e-08!34;UBERON:0001017!2.76e-08!73;UBERON:0005743!2.76e-08!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.54e-14,34;UBERON:0001017,1.13e-12,73;UBERON:0001016,4.45e-12,75;UBERON:0003528,2.45e-09,29;UBERON:0002791,2.45e-09,29;UBERON:0001893,2.45e-09,29;UBERON:0000073,3.63e-09,54;UBERON:0001049,6.44e-09,52;UBERON:0005068,6.44e-09,52;UBERON:0006241,6.44e-09,52;UBERON:0007135,6.44e-09,52;UBERON:0000956,7.43e-09,21;UBERON:0001869,7.43e-09,21;UBERON:0000203,7.43e-09,21;UBERON:0001948,8.33e-08,5;UBERON:0002315,8.33e-08,5;UBERON:0002346,1.17e-07,64;UBERON:0003075,1.17e-07,64;UBERON:0007284,1.17e-07,64;UBERON:0004121,1.30e-07,95;UBERON:0000924,1.30e-07,95;UBERON:0006601,1.30e-07,95 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.281577444303333,0,0.171217968225505,0.159544317990673,0.171200729931206,0.524522414513984,2.6648780945253,1.21485160433896,4.19737126876888,0.315462165358238,0,0.42438965179803,0.340173160604279,1.48936426801328,1.82839852397255,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,1.25559489221072,0,0,0,0.683045484958446,0,0.125896817975577,0.608261587317087,0.367093504323363,0.782391344348039,1.52617609466313,0.878744730937887,0.58328969722285,0.839918529752175,1.43752564364972,0.167782606057736,1.45072428402269,2.35265659399725,1.28629718017973,1.71920063963254,0.515672092277442,4.45096213891115,1.5869729378161,1.26766280701236,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,2.8419204597844,2.09720077362883,0.768436610643109,3.7328260431052,8.10035629990144,3.99617426567626,1.71390590642282,2.20868540951614,2.44981598429908,5.36734637702124,2.75765635983006,1.10115880999389,0.893811366596314,0.768032666281217,2.90149833006426,7.50198677539759,4.16730696445408,0.837548997004143,0,0.30559649555362,4.12480019663135,3.41692033917847,2.42319279572891,0.908714319998209,0.755715601067855,0,0,0,0,0,0,0,1.02258193546835,1.81850203222008,1.41335829804136,0.281686839553361,0,0,0,2.16491041011214,1.52015919285059,2.52762222507392,0.11418387971906,0.258937883647172,0.148442139064825,1.38788261412909,0,0.922461989024234,0.753613202763113,0.352766121407114,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,0.718890747035522,0.599902730993408,0.889491589511453,0,0,0.502617408451458,0.347648640384553,0.511430914660661,0.62336413367868,0.162241263067758,0.611036183101898,0.373220911830279,0,0,0.910843100738926,0.689706313300419,0.720248519221397,0.753524089178575,0.340182495756639,0.512454881139399,0.468508622798644,0.258703370739016,0.646703978798527,0.756424320671277,0.703804496655795,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0.772043721344145,1.13665399758237,1.03562886267751,1.17263029990548,0.540186184383045,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.164167464079095,0,0.146199987425332,0,0,0.210289948564127,1.13195073617213,0,0.264450566663544,1.06644125267617,0,0.644337306610467,0,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.754005626400808,0,0.19496408711912,0,0.432276099749388,0,0.948339504765408,0.685491075658373,1.1270773567308,0,0.387904974335251,0.210407459670956,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0.500535317148282,0.589676985339609,0.224862112384854,1.01430060694251,0.964708639009667,0.50925170356284,0.575392274901621,0.324270453550071,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.651859905768103,1.18821560042632,0.234690248288502,1.00503754465089,0,0,0.315270288212382,0.8858587585951,0.797273843287435,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0.655739781506702,0.252470927204373,2.2085575359138,1.56175497718655,0.861693590931196,1.43381278771531,0.445597348164788,0.566153061577665,2.02405350837447,0.876767573733936,0.790575555893047,0,0,0.890328018336276,0.977321756121456,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,1.07168517515796,0,0.535106452806212,0.329098041204242,0,0.23467170806371,0.42366414172764,0,0,0.322928853391811,0.361877549568935,0.238744688006273,0,0,0.18542530201051,0.170870880797853,0.82554747185289,0.555583582109135,0.188368457004691,0.820165366326151,1.37266903923914,0.339956859987711,0.279902904647316,0.414599921413271,0,0.632671987162271,0.609958401380546,0.756037385752609,0.836353184057875,0,0.809186078308924,0.247960367176008,0,0.648074866458964,0,0.56369293868419,1.04661582230785,0.827292452285488,0.388902376688095,0.129159823477731,0.337912250981556,0.938857909166032,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.810900861160657,0.924398614483445,1.03936658382236,0.716106782669926,0.596044064343795,1.20195449519969,0.886137163047463,0.403865799792591,0.228620419965,0.806609481094724,0.38983152295901,0.481059208201647,0.701261413089414,0.226730383615211,0.887943813496259,1.70456327558004,0.839423081820392,0,0.187682475451182,0.36630324853453,0,0,0,1.38097570952153,1.14579102687879,1.89038500578056,0.685082519770642,0,2.70009000092722,0.900642406448441,1.81256963593682,1.55328093525546,1.14166082342594,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,1.030175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| ||
|short_description=p@chr17:35972855..35972872,- | |short_description=p@chr17:35972855..35972872,- | ||
}} | }} |
Latest revision as of 20:08, 4 August 2015
Short description: | p@chr17:35972855..35972872, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35972855..35972872, - |
Coexpression cluster: | MCL_coexpression_mm9:971 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 7.93e-19 | 91 |
multi fate stem cell | 7.93e-19 | 91 |
stem cell | 5.33e-18 | 97 |
CNS neuron (sensu Vertebrata) | 8.41e-18 | 23 |
neuroblast (sensu Vertebrata) | 8.41e-18 | 23 |
neuron | 7.85e-17 | 33 |
neuronal stem cell | 7.85e-17 | 33 |
neuroblast | 7.85e-17 | 33 |
electrically signaling cell | 7.85e-17 | 33 |
electrically responsive cell | 5.27e-16 | 39 |
electrically active cell | 5.27e-16 | 39 |
neural cell | 2.73e-15 | 43 |
ectodermal cell | 9.14e-15 | 44 |
neurectodermal cell | 9.14e-15 | 44 |
embryonic cell | 6.83e-11 | 70 |
neuron of cerebral cortex | 8.13e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.54e-14 | 34 |
central nervous system | 1.13e-12 | 73 |
nervous system | 4.45e-12 | 75 |
brain grey matter | 2.45e-09 | 29 |
regional part of telencephalon | 2.45e-09 | 29 |
telencephalon | 2.45e-09 | 29 |
regional part of nervous system | 3.63e-09 | 54 |
neural tube | 6.44e-09 | 52 |
neural rod | 6.44e-09 | 52 |
future spinal cord | 6.44e-09 | 52 |
neural keel | 6.44e-09 | 52 |
cerebral cortex | 7.43e-09 | 21 |
cerebral hemisphere | 7.43e-09 | 21 |
pallium | 7.43e-09 | 21 |
regional part of spinal cord | 8.33e-08 | 5 |
gray matter of spinal cord | 8.33e-08 | 5 |
neurectoderm | 1.17e-07 | 64 |
neural plate | 1.17e-07 | 64 |
presumptive neural plate | 1.17e-07 | 64 |
ectoderm-derived structure | 1.30e-07 | 95 |
ectoderm | 1.30e-07 | 95 |
presumptive ectoderm | 1.30e-07 | 95 |