FFCP PHASE1:Hg19::chr11:3028258..3028281,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=833 | |EntrezGene=833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |HGNC=1493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000484484_5end | |association_with_transcript=-18bp_to_ENST00000484484_5end | ||
|cluster_id=chr11:3028258..3028281,- | |||
|coexpression_cluster_id=C1336 | |||
|description=CAGE_peak_4_at_CARS_5end | |description=CAGE_peak_4_at_CARS_5end | ||
|id=chr11:3028258..3028281,- | |id=chr11:3028258..3028281,- | ||
|ontology_enrichment_celltype=CL:0000625!3.32e-13!11;CL:0000791!2.63e-12!18;CL:0000789!2.63e-12!18;CL:0002420!2.63e-12!18;CL:0002419!2.63e-12!18;CL:0000790!2.63e-12!18;CL:0000084!5.87e-08!25;CL:0000827!5.87e-08!25 | |ontology_enrichment_celltype=CL:0000625!3.32e-13!11;CL:0000791!2.63e-12!18;CL:0000789!2.63e-12!18;CL:0002420!2.63e-12!18;CL:0002419!2.63e-12!18;CL:0000790!2.63e-12!18;CL:0000084!5.87e-08!25;CL:0000827!5.87e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.41e-39;11!CL:0000791;8.84e-24;18!CL:0000789;8.84e-24;18!CL:0002419;8.84e-24;18!CL:0000084;8.16e-17;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.41e-39,11;CL:0000791,8.86e-24,18;CL:0000789,8.86e-24,18;CL:0002420,8.86e-24,18;CL:0002419,8.86e-24,18;CL:0000790,8.86e-24,18;CL:0000084,8.17e-17,25;CL:0000827,8.17e-17,25;CL:0000838,1.69e-07,52;CL:0000542,2.45e-07,53;CL:0000051,2.45e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-24;18!UBERON:0005754;4.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.56e-08;1!DOID:3149;4.56e-08;1!DOID:171;8.71e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.16e-08,1;DOID:3149,7.16e-08,1;DOID:171,8.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-41!115;UBERON:0001049!2.68e-19!57;UBERON:0005068!2.68e-19!57;UBERON:0006241!2.68e-19!57;UBERON:0007135!2.68e-19!57;UBERON:0000073!3.16e-15!94;UBERON:0001016!3.16e-15!94;UBERON:0002346!5.52e-15!90;UBERON:0003075!6.34e-15!86;UBERON:0007284!6.34e-15!86;UBERON:0001017!1.82e-14!82;UBERON:0005743!1.88e-14!86;UBERON:0002616!3.17e-14!59;UBERON:0000955!8.00e-14!69;UBERON:0006238!8.00e-14!69;UBERON:0002780!2.37e-13!41;UBERON:0001890!2.37e-13!41;UBERON:0006240!2.37e-13!41;UBERON:0003080!6.78e-13!42;UBERON:0009663!4.26e-12!7;UBERON:0002308!8.07e-12!9;UBERON:0000125!8.07e-12!9;UBERON:0002420!1.88e-11!9;UBERON:0007245!1.88e-11!9;UBERON:0010009!1.88e-11!9;UBERON:0010011!1.88e-11!9;UBERON:0000454!1.88e-11!9;UBERON:0001893!6.83e-11!34;UBERON:0002791!4.18e-10!33;UBERON:0003056!4.65e-10!61;UBERON:0002020!1.04e-09!34;UBERON:0003528!1.04e-09!34;UBERON:0000153!3.63e-09!129;UBERON:0007811!3.63e-09!129;UBERON:0001869!5.82e-09!32;UBERON:0003076!7.02e-08!15;UBERON:0003057!7.02e-08!15;UBERON:0002298!1.21e-07!8;UBERON:0000924!1.60e-07!173;UBERON:0006601!1.60e-07!173;UBERON:0000369!1.78e-07!4;UBERON:0002435!1.78e-07!4;UBERON:0000204!1.78e-07!4;UBERON:0010082!1.78e-07!4;UBERON:0000033!2.40e-07!123;UBERON:0004121!2.51e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.31e-10;3!UBERON:0005290;1.31e-10;3!UBERON:0006947;3.34e-10;3!UBERON:0004054;3.34e-10;3!UBERON:0001000;1.75e-08;1!UBERON:0005352;1.75e-08;1!UBERON:0007029;4.56e-08;1!UBERON:0000998;4.56e-08;1!UBERON:0006868;4.56e-08;1!UBERON:0005904;7.31e-08;4!UBERON:0000014;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.41e-10,3;UBERON:0005290,1.41e-10,3;UBERON:0010096,1.41e-10,3;UBERON:0006947,2.98e-10,3;UBERON:0004054,2.98e-10,3;UBERON:0001000,1.63e-08,1;UBERON:0005352,1.63e-08,1;UBERON:0007029,3.10e-08,1;UBERON:0000998,4.11e-08,1;UBERON:0006868,4.11e-08,1;UBERON:0005904,6.71e-08,4;UBERON:0000014,1.20e-07,4 | |||
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| ||
|short_description=p4@CARS | |short_description=p4@CARS | ||
}} | }} |
Latest revision as of 13:52, 17 September 2015
Short description: | p4@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CARS_5end |
Coexpression cluster: | C1336_CD8_Natural_Pericytes_Peripheral_medulla_thyroid_ductus |
Association with transcript: | -18bp_to_ENST00000484484_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.41e-39 | 11 |
mature alpha-beta T cell | 8.86e-24 | 18 |
alpha-beta T cell | 8.86e-24 | 18 |
immature T cell | 8.86e-24 | 18 |
mature T cell | 8.86e-24 | 18 |
immature alpha-beta T cell | 8.86e-24 | 18 |
T cell | 8.17e-17 | 25 |
pro-T cell | 8.17e-17 | 25 |
lymphoid lineage restricted progenitor cell | 1.69e-07 | 52 |
lymphocyte | 2.45e-07 | 53 |
common lymphoid progenitor | 2.45e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.41e-10 | 3 |
myelencephalon | 1.41e-10 | 3 |
future myelencephalon | 1.41e-10 | 3 |
male genital duct | 2.98e-10 | 3 |
internal male genitalia | 2.98e-10 | 3 |
vas deferens | 1.63e-08 | 1 |
spermatic cord | 1.63e-08 | 1 |
surface | 3.10e-08 | 1 |
seminal vesicle | 4.11e-08 | 1 |
seminal fluid secreting gland | 4.11e-08 | 1 |
duct of male reproductive system | 6.71e-08 | 4 |
zone of skin | 1.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.16e-08 | 1 |
keratoacanthoma | 7.16e-08 | 1 |
neuroectodermal tumor | 8.37e-07 | 10 |