FFCP PHASE1:Mm9::chr1:166865653..166865658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16963 | |EntrezGene=16963 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=P47993 | |UniProt=P47993 | ||
|association_with_transcript=0bp_to_ENSMUST00000027860_5end | |association_with_transcript=0bp_to_ENSMUST00000027860_5end | ||
|cluster_id=chr1:166865653..166865658,- | |||
|description=CAGE_peak_1_at_Xcl1_5end | |description=CAGE_peak_1_at_Xcl1_5end | ||
|id=chr1:166865653..166865658,- | |id=chr1:166865653..166865658,- | ||
|ontology_enrichment_celltype=CL:0000084!7.67e-09!11;CL:0000827!7.67e-09!11;CL:0000838!8.95e-08!12;CL:0000988!3.49e-07!32;CL:0002032!3.49e-07!32;CL:0000037!3.49e-07!32;CL:0000566!3.49e-07!32;CL:0000837!3.49e-07!32;CL:0000791!4.42e-07!9;CL:0000789!4.42e-07!9;CL:0002420!4.42e-07!9;CL:0002419!4.42e-07!9;CL:0000790!4.42e-07!9;CL:0000542!6.98e-07!13;CL:0000051!6.98e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.24e-11,11;CL:0000827,5.24e-11,11;CL:0000838,6.07e-10,12;CL:0000542,4.81e-09,13;CL:0000051,4.81e-09,13;CL:0000988,6.57e-09,32;CL:0002032,6.57e-09,32;CL:0000037,6.57e-09,32;CL:0000837,6.57e-09,32;CL:0000791,8.19e-08,9;CL:0000789,8.19e-08,9;CL:0002420,8.19e-08,9;CL:0002419,8.19e-08,9;CL:0000790,8.19e-08,9;CL:0002031,2.13e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.56e-16!48;UBERON:0002390!4.23e-14!45;UBERON:0003061!4.23e-14!45;UBERON:0003408!3.80e-13!24;UBERON:0004177!9.31e-13!29;UBERON:0006562!1.01e-12!24;UBERON:0001557!1.01e-12!24;UBERON:0001042!1.01e-12!24;UBERON:0008814!1.01e-12!24;UBERON:0009145!1.01e-12!24;UBERON:0002370!1.51e-12!23;UBERON:0000974!1.51e-12!23;UBERON:0004807!1.51e-12!23;UBERON:0005058!1.51e-12!23;UBERON:0003351!1.51e-12!23;UBERON:0009113!1.51e-12!23;UBERON:0003295!1.51e-12!23;UBERON:0009722!1.51e-12!23;UBERON:0005562!1.51e-12!23;UBERON:0007690!1.51e-12!23;UBERON:0002405!2.64e-11!70;UBERON:0000072!2.17e-10!27;UBERON:0007023!8.71e-09!51;UBERON:0001004!5.40e-08!42;UBERON:0005057!9.54e-08!51;UBERON:0000065!1.60e-07!41;UBERON:0000063!3.01e-07!35;UBERON:0003081!4.66e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.20e-23,24;UBERON:0002370,1.90e-22,23;UBERON:0000974,1.90e-22,23;UBERON:0004807,1.90e-22,23;UBERON:0005058,1.90e-22,23;UBERON:0003351,1.90e-22,23;UBERON:0009113,1.90e-22,23;UBERON:0003295,1.90e-22,23;UBERON:0009722,1.90e-22,23;UBERON:0005562,1.90e-22,23;UBERON:0007690,1.90e-22,23;UBERON:0006562,2.64e-21,24;UBERON:0001557,2.64e-21,24;UBERON:0001042,2.64e-21,24;UBERON:0008814,2.64e-21,24;UBERON:0009145,2.64e-21,24;UBERON:0004177,1.01e-18,29;UBERON:0005057,1.01e-18,29;UBERON:0000072,2.20e-18,27;UBERON:0002193,2.84e-16,48;UBERON:0002405,2.84e-16,48;UBERON:0002390,5.49e-16,45;UBERON:0003061,5.49e-16,45;UBERON:0000077,1.25e-14,35;UBERON:0007811,4.88e-14,36;UBERON:0001004,1.42e-12,42;UBERON:0000065,1.10e-11,41;UBERON:0002530,5.34e-11,65;UBERON:0000153,6.08e-11,43;UBERON:0003929,1.90e-08,55;UBERON:0002368,3.56e-08,60;UBERON:0003081,5.29e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,10.2775767170717,7.2560003159818,66.7750076079469,46.1083078993044,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0,2.99689057090326,3.70208970735495,1.69755860719212,0.255129870453209,30.3830310674709,4.70159620450084,0.47997726838022,0.68822784320151,0,0,0,1.90023419456374,3.02436155711917,1.10865255327652,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,2.17608642603403,11.7632829699862,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,5.95557132388495,0.890652834388949,0,0,0,0,0,0.125666591329675,0,0.289198713839823,3.5384422077995,0,0,0.484875253135222,0,0,0,2.29911349687732,10.9031763300387,2.39961092397363,2.66847476853436,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.793351699990633,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.864552199498777,1.7922714592893,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,0,1.11642284300551,1.5601883655728,0,0.179397413521912,0,1.10851914099963,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0.863424909329478,0.433947175744535,0,0,1.47529281905711,2.20749397043786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,1.97863503529776,0.161464426695906,0.0603129249281559,0.477489376012546,0.328281799490123,0.291480836629851,0,1.53783792718067,0,0.740778109478847,0,0.546776910884101,0.457556346413045,16.1479508494163,10.216456019627,12.8525975638114,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.388844919875379,1.24267862617385,0.56369293868419,0,0,0,0,0.168956125490778,0,0.2604087696879,0.314578033277133,0.241584120826006,0,1.58005560314089,3.04087822935246,5.75181360123033,7.01572444080093,8.23522800070415,3.9736270956253,2.04332264183947,1.9199638532695,1.9183625490148,1.37172251979,2.01652370273681,2.92373642219257,2.98256709085021,2.57129184799452,0.226730383615211,0,0,0,0.386379188064381,0.93841237725591,1.46521299413812,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.516493293766305,10.2775767170717,7.2560003159818,66.7750076079469,46.1083078993044,0.171200729931206,0.174840804837995,0.333109761815663,0.607425802169478,0,2.99689057090326,3.70208970735495,1.69755860719212,0.255129870453209,30.3830310674709,4.70159620450084,0.47997726838022,0.68822784320151,0,0,0,1.90023419456374,3.02436155711917,1.10865255327652,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,2.17608642603403,11.7632829699862,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,5.95557132388495,0.890652834388949,0,0,0,0,0,0.125666591329675,0,0.289198713839823,3.5384422077995,0,0,0.484875253135222,0,0,0,2.29911349687732,10.9031763300387,2.39961092397363,2.66847476853436,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.793351699990633,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.864552199498777,1.7922714592893,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,0,1.11642284300551,1.5601883655728,0,0.179397413521912,0,1.10851914099963,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0.863424909329478,0.433947175744535,0,0,1.47529281905711,2.20749397043786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.15479086080775,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,1.97863503529776,0.161464426695906,0.0603129249281559,0.477489376012546,0.328281799490123,0.291480836629851,0,1.53783792718067,0,0.740778109478847,0,0.546776910884101,0.457556346413045,16.1479508494163,10.216456019627,12.8525975638114,0.954670618015114,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.388844919875379,1.24267862617385,0.56369293868419,0,0,0,0,0.168956125490778,0,0.2604087696879,0.314578033277133,0.241584120826006,0,1.58005560314089,3.04087822935246,5.75181360123033,7.01572444080093,8.23522800070415,3.9736270956253,2.04332264183947,1.9199638532695,1.9183625490148,1.37172251979,2.01652370273681,2.92373642219257,2.98256709085021,2.57129184799452,0.226730383615211,0,0,0,0.386379188064381,0.93841237725591,1.46521299413812,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0.441182838239031,0.231867835620421 | ||
|short_description=p1@Xcl1 | |short_description=p1@Xcl1 | ||
}} | }} |
Latest revision as of 17:11, 26 September 2015
Short description: | p1@Xcl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Xcl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 0bp_to_ENSMUST00000027860_5end |
EntrezGene: | Xcl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.24e-11 | 11 |
pro-T cell | 5.24e-11 | 11 |
lymphoid lineage restricted progenitor cell | 6.07e-10 | 12 |
lymphocyte | 4.81e-09 | 13 |
common lymphoid progenitor | 4.81e-09 | 13 |
hematopoietic cell | 6.57e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.57e-09 | 32 |
hematopoietic stem cell | 6.57e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.57e-09 | 32 |
mature alpha-beta T cell | 8.19e-08 | 9 |
alpha-beta T cell | 8.19e-08 | 9 |
immature T cell | 8.19e-08 | 9 |
mature T cell | 8.19e-08 | 9 |
immature alpha-beta T cell | 8.19e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 2.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.20e-23 | 24 |
thymus | 1.90e-22 | 23 |
neck | 1.90e-22 | 23 |
respiratory system epithelium | 1.90e-22 | 23 |
hemolymphoid system gland | 1.90e-22 | 23 |
pharyngeal epithelium | 1.90e-22 | 23 |
thymic region | 1.90e-22 | 23 |
pharyngeal gland | 1.90e-22 | 23 |
entire pharyngeal arch endoderm | 1.90e-22 | 23 |
thymus primordium | 1.90e-22 | 23 |
early pharyngeal endoderm | 1.90e-22 | 23 |
pharynx | 2.64e-21 | 24 |
upper respiratory tract | 2.64e-21 | 24 |
chordate pharynx | 2.64e-21 | 24 |
pharyngeal arch system | 2.64e-21 | 24 |
pharyngeal region of foregut | 2.64e-21 | 24 |
hemopoietic organ | 1.01e-18 | 29 |
immune organ | 1.01e-18 | 29 |
segment of respiratory tract | 2.20e-18 | 27 |
hemolymphoid system | 2.84e-16 | 48 |
immune system | 2.84e-16 | 48 |
hematopoietic system | 5.49e-16 | 45 |
blood island | 5.49e-16 | 45 |
mixed endoderm/mesoderm-derived structure | 1.25e-14 | 35 |
craniocervical region | 4.88e-14 | 36 |
respiratory system | 1.42e-12 | 42 |
respiratory tract | 1.10e-11 | 41 |
gland | 5.34e-11 | 65 |
anterior region of body | 6.08e-11 | 43 |
gut epithelium | 1.90e-08 | 55 |
endocrine gland | 3.56e-08 | 60 |
lateral plate mesoderm | 5.29e-07 | 87 |