FFCP PHASE1:Mm9::chr17:56574012..56574016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:56574012..56574016,- | |||
|description=CAGE_peak_at_chr17:56574012..56574016,- | |description=CAGE_peak_at_chr17:56574012..56574016,- | ||
|id=chr17:56574012..56574016,- | |id=chr17:56574012..56574016,- | ||
|ontology_enrichment_celltype=CL:0002319!6.79e-12!43;CL:0000221!2.39e-11!44;CL:0000133!2.39e-11!44;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0000055!1.11e-09!50;CL:0000540!3.98e-09!33;CL:0000047!3.98e-09!33;CL:0000031!3.98e-09!33;CL:0000404!3.98e-09!33;CL:0000393!1.88e-07!39;CL:0000211!1.88e-07!39 | |ontology_enrichment_celltype=CL:0002319!6.79e-12!43;CL:0000221!2.39e-11!44;CL:0000133!2.39e-11!44;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0000055!1.11e-09!50;CL:0000540!3.98e-09!33;CL:0000047!3.98e-09!33;CL:0000031!3.98e-09!33;CL:0000404!3.98e-09!33;CL:0000393!1.88e-07!39;CL:0000211!1.88e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.01e-20,43;CL:0000221,3.33e-20,44;CL:0000133,3.33e-20,44;CL:0000117,4.42e-20,23;CL:0000337,4.42e-20,23;CL:0002321,8.20e-14,70;CL:0000540,1.39e-13,33;CL:0000047,1.39e-13,33;CL:0000031,1.39e-13,33;CL:0000404,1.39e-13,33;CL:0002609,1.69e-13,6;CL:0000878,1.54e-11,2;CL:0000129,1.54e-11,2;CL:0000393,2.80e-11,39;CL:0000211,2.80e-11,39;CL:0002453,1.79e-10,8;CL:0000333,2.09e-08,10;CL:0000095,2.09e-08,10;CL:0000243,2.09e-08,10;CL:0000123,2.09e-08,10;CL:0000125,2.09e-08,10;CL:0000030,2.09e-08,10;CL:0000339,2.09e-08,10;CL:0002610,2.40e-07,3;CL:0002613,2.40e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.51e-19!73;UBERON:0005743!8.51e-19!73;UBERON:0000073!9.72e-18!75;UBERON:0001016!9.72e-18!75;UBERON:0002020!5.22e-15!34;UBERON:0001049!1.24e-14!52;UBERON:0005068!1.24e-14!52;UBERON:0006241!1.24e-14!52;UBERON:0007135!1.24e-14!52;UBERON:0004121!2.61e-14!102;UBERON:0000924!2.61e-14!102;UBERON:0006601!2.61e-14!102;UBERON:0002346!7.99e-14!71;UBERON:0003075!7.99e-14!71;UBERON:0007284!7.99e-14!71;UBERON:0000955!8.40e-13!50;UBERON:0006238!8.40e-13!50;UBERON:0003080!1.19e-12!40;UBERON:0002616!2.29e-12!49;UBERON:0002780!3.20e-12!39;UBERON:0001890!3.20e-12!39;UBERON:0006240!3.20e-12!39;UBERON:0002791!3.43e-12!29;UBERON:0003528!3.43e-12!29;UBERON:0001893!3.43e-12!29;UBERON:0000033!1.94e-11!63;UBERON:0003056!4.77e-11!49;UBERON:0000956!1.68e-09!21;UBERON:0001869!1.68e-09!21;UBERON:0000203!1.68e-09!21;UBERON:0007811!1.53e-07!86;UBERON:0000153!8.10e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.04e-15,73;UBERON:0001016,8.92e-15,75;UBERON:0000073,2.88e-11,54;UBERON:0004121,3.52e-11,95;UBERON:0000924,3.52e-11,95;UBERON:0006601,3.52e-11,95;UBERON:0002020,1.63e-10,34;UBERON:0003528,6.78e-10,29;UBERON:0002791,6.78e-10,29;UBERON:0001893,6.78e-10,29;UBERON:0000956,4.66e-08,21;UBERON:0001869,4.66e-08,21;UBERON:0000203,4.66e-08,21;UBERON:0001049,5.02e-08,52;UBERON:0005068,5.02e-08,52;UBERON:0006241,5.02e-08,52;UBERON:0007135,5.02e-08,52;UBERON:0002616,1.89e-07,46;UBERON:0004684,2.40e-07,3;UBERON:0002275,2.40e-07,3;UBERON:0000955,2.89e-07,47;UBERON:0006238,2.89e-07,47;UBERON:0002780,4.13e-07,39;UBERON:0001890,4.13e-07,39;UBERON:0006240,4.13e-07,39;UBERON:0003080,6.58e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.09012578190223,0.439372365468944,0.388859798148567,0.55994568650145,1.43752564364972,0.167782606057736,0,0,0,0,0,0.202316460859598,4.23192783417626,0,0,0,0,0,0,1.49800055259202,3.45796474789399,1.03689612308478,1.62007125998029,1.05162480675691,0.856952953211411,0.220868540951614,0.489963196859816,1.43768206527355,0,0,1.0214987046815,1.22885226604995,1.18697658957174,0.914876436024097,1.04182674111352,0.837548997004143,0,0.45839474333043,0.883885756421003,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0,0,0.445326417194474,0,0.608930956624282,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.299581278809645,0.915001205637253,0,1.04294592115366,0,0.83115217823824,0,0.203678727700633,0,0,0,0,0,0.360124259610698,0,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0.556094498451196,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.630869845692382,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0.532020700926821,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.920650473014354,0.572895513439397,1.20297227640581,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.09012578190223,0.439372365468944,0.388859798148567,0.55994568650145,1.43752564364972,0.167782606057736,0,0,0,0,0,0.202316460859598,4.23192783417626,0,0,0,0,0,0,1.49800055259202,3.45796474789399,1.03689612308478,1.62007125998029,1.05162480675691,0.856952953211411,0.220868540951614,0.489963196859816,1.43768206527355,0,0,1.0214987046815,1.22885226604995,1.18697658957174,0.914876436024097,1.04182674111352,0.837548997004143,0,0.45839474333043,0.883885756421003,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0,0,0.445326417194474,0,0.608930956624282,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.299581278809645,0.915001205637253,0,1.04294592115366,0,0.83115217823824,0,0.203678727700633,0,0,0,0,0,0.360124259610698,0,0.0680364991513279,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0.556094498451196,0,0,0,0,0,0.568326998791185,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.630869845692382,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.342745537829186,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0.532020700926821,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.920650473014354,0.572895513439397,1.20297227640581,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr17:56574012..56574016,- | |short_description=p@chr17:56574012..56574016,- | ||
}} | }} |
Latest revision as of 03:26, 5 August 2015
Short description: | p@chr17:56574012..56574016, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:56574012..56574016, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.01e-20 | 43 |
ectodermal cell | 3.33e-20 | 44 |
neurectodermal cell | 3.33e-20 | 44 |
CNS neuron (sensu Vertebrata) | 4.42e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-20 | 23 |
embryonic cell | 8.20e-14 | 70 |
neuron | 1.39e-13 | 33 |
neuronal stem cell | 1.39e-13 | 33 |
neuroblast | 1.39e-13 | 33 |
electrically signaling cell | 1.39e-13 | 33 |
neuron of cerebral cortex | 1.69e-13 | 6 |
central nervous system macrophage | 1.54e-11 | 2 |
microglial cell | 1.54e-11 | 2 |
electrically responsive cell | 2.80e-11 | 39 |
electrically active cell | 2.80e-11 | 39 |
oligodendrocyte precursor cell | 1.79e-10 | 8 |
migratory neural crest cell | 2.09e-08 | 10 |
neuron associated cell | 2.09e-08 | 10 |
glial cell (sensu Vertebrata) | 2.09e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.09e-08 | 10 |
glial cell | 2.09e-08 | 10 |
glioblast | 2.09e-08 | 10 |
glioblast (sensu Vertebrata) | 2.09e-08 | 10 |
raphe nuclei neuron | 2.40e-07 | 3 |
striatum neuron | 2.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.04e-15 | 73 |
nervous system | 8.92e-15 | 75 |
regional part of nervous system | 2.88e-11 | 54 |
ectoderm-derived structure | 3.52e-11 | 95 |
ectoderm | 3.52e-11 | 95 |
presumptive ectoderm | 3.52e-11 | 95 |
gray matter | 1.63e-10 | 34 |
brain grey matter | 6.78e-10 | 29 |
regional part of telencephalon | 6.78e-10 | 29 |
telencephalon | 6.78e-10 | 29 |
cerebral cortex | 4.66e-08 | 21 |
cerebral hemisphere | 4.66e-08 | 21 |
pallium | 4.66e-08 | 21 |
neural tube | 5.02e-08 | 52 |
neural rod | 5.02e-08 | 52 |
future spinal cord | 5.02e-08 | 52 |
neural keel | 5.02e-08 | 52 |
regional part of brain | 1.89e-07 | 46 |
raphe nuclei | 2.40e-07 | 3 |
reticular formation | 2.40e-07 | 3 |
brain | 2.89e-07 | 47 |
future brain | 2.89e-07 | 47 |
regional part of forebrain | 4.13e-07 | 39 |
forebrain | 4.13e-07 | 39 |
future forebrain | 4.13e-07 | 39 |
anterior neural tube | 6.58e-07 | 40 |