FFCP PHASE1:Mm9::chr18:61204893..61204902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18596 | |EntrezGene=18596 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=977 | |||
|TSSclassifier=NA | |||
|UniProt=E9QN12 | |UniProt=E9QN12 | ||
|association_with_transcript=39bp_to_ENSMUST00000115274_5end | |association_with_transcript=39bp_to_ENSMUST00000115274_5end | ||
|cluster_id=chr18:61204893..61204902,+ | |||
|description=CAGE_peak_6_at_Pdgfrb_5end | |description=CAGE_peak_6_at_Pdgfrb_5end | ||
|id=chr18:61204893..61204902,+ | |id=chr18:61204893..61204902,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.46e-11,3;CL:0000737,1.46e-11,3;CL:0000746,1.46e-11,3;CL:0000513,1.46e-11,3;CL:0000680,1.17e-09,6;CL:0000187,1.17e-09,6;CL:0000056,1.17e-09,6;CL:0000128,2.07e-09,6;CL:0000126,2.07e-09,6;CL:0000127,2.07e-09,6;CL:0000222,2.75e-08,7;CL:0002603,5.52e-08,2;CL:0000708,7.59e-08,2;CL:0002453,4.47e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.14e-07!14;UBERON:0000117!2.14e-07!14;UBERON:0000171!2.14e-07!14;UBERON:0000170!2.14e-07!14;UBERON:0005597!2.14e-07!14;UBERON:0000118!2.14e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.84e-08,10;UBERON:0002048,2.09e-08,14;UBERON:0000117,2.09e-08,14;UBERON:0000171,2.09e-08,14;UBERON:0000170,2.09e-08,14;UBERON:0005597,2.09e-08,14;UBERON:0000118,2.09e-08,14;UBERON:0003210,7.59e-08,2;UBERON:0005153,8.05e-07,17;UBERON:0005178,8.05e-07,17;UBERON:0005181,8.05e-07,17;UBERON:0002224,8.05e-07,17;UBERON:0000915,8.05e-07,17;UBERON:0008947,8.05e-07,17;UBERON:0003258,8.05e-07,17 | |||
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| ||
|short_description=p6@Pdgfrb | |short_description=p6@Pdgfrb | ||
}} | }} |
Latest revision as of 13:49, 1 October 2015
Short description: | p6@Pdgfrb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pdgfrb_5end |
Coexpression cluster: | MCL_coexpression_mm9:977 |
Association with transcript: | 39bp_to_ENSMUST00000115274_5end |
EntrezGene: | Pdgfrb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.46e-11 | 3 |
striated muscle cell | 1.46e-11 | 3 |
cardiac muscle cell | 1.46e-11 | 3 |
cardiac muscle myoblast | 1.46e-11 | 3 |
muscle precursor cell | 1.17e-09 | 6 |
muscle cell | 1.17e-09 | 6 |
myoblast | 1.17e-09 | 6 |
oligodendrocyte | 2.07e-09 | 6 |
macroglial cell | 2.07e-09 | 6 |
astrocyte | 2.07e-09 | 6 |
mesodermal cell | 2.75e-08 | 7 |
astrocyte of the cerebellum | 5.52e-08 | 2 |
leptomeningeal cell | 7.59e-08 | 2 |
oligodendrocyte precursor cell | 4.47e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 1.84e-08 | 10 |
lung | 2.09e-08 | 14 |
respiratory tube | 2.09e-08 | 14 |
respiration organ | 2.09e-08 | 14 |
pair of lungs | 2.09e-08 | 14 |
lung primordium | 2.09e-08 | 14 |
lung bud | 2.09e-08 | 14 |
blood-cerebrospinal fluid barrier | 7.59e-08 | 2 |
epithelial bud | 8.05e-07 | 17 |
thoracic cavity element | 8.05e-07 | 17 |
thoracic segment organ | 8.05e-07 | 17 |
thoracic cavity | 8.05e-07 | 17 |
thoracic segment of trunk | 8.05e-07 | 17 |
respiratory primordium | 8.05e-07 | 17 |
endoderm of foregut | 8.05e-07 | 17 |