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FFCP PHASE1:Mm9::chr2:91034924..91034946,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22259
|EntrezGene=22259
|HGNC=
|HGNC=
|MCL_coexpression_id=3373
|TSSclassifier=NA
|UniProt=A2AGR4
|UniProt=A2AGR4
|association_with_transcript=95bp_to_ENSMUST00000111355_5end
|association_with_transcript=95bp_to_ENSMUST00000111355_5end
|cluster_id=chr2:91034924..91034946,-
|description=CAGE_peak_2_at_Nr1h3_5end
|description=CAGE_peak_2_at_Nr1h3_5end
|id=chr2:91034924..91034946,-
|id=chr2:91034924..91034946,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!3.31e-15!66;UBERON:0002405!6.90e-15!70;UBERON:0005177!1.47e-14!85;UBERON:0000077!1.85e-14!97;UBERON:0002365!2.89e-14!25;UBERON:0002330!2.89e-14!25;UBERON:0001041!4.98e-14!92;UBERON:0002107!3.99e-13!22;UBERON:0007499!3.99e-13!22;UBERON:0006925!3.99e-13!22;UBERON:0009497!3.99e-13!22;UBERON:0000015!3.99e-13!22;UBERON:0002423!3.99e-13!22;UBERON:0006235!3.99e-13!22;UBERON:0008835!3.99e-13!22;UBERON:0003894!3.99e-13!22;UBERON:0004161!3.99e-13!22;UBERON:0008836!3.99e-13!22;UBERON:0009854!5.80e-12!23;UBERON:0009856!5.80e-12!23;UBERON:0000926!6.96e-12!193;UBERON:0004120!6.96e-12!193;UBERON:0006603!6.96e-12!193;UBERON:0005057!1.42e-11!51;UBERON:0003104!1.76e-11!131;UBERON:0009142!1.76e-11!131;UBERON:0000466!2.79e-11!79;UBERON:0005172!6.69e-11!49;UBERON:0005173!6.69e-11!49;UBERON:0002417!6.69e-11!49;UBERON:0000916!6.69e-11!49;UBERON:0002100!8.57e-11!98;UBERON:0005911!1.37e-10!69;UBERON:0001048!1.47e-08!147;UBERON:0000949!4.61e-08!72;UBERON:0002530!6.84e-08!65;UBERON:0005153!7.46e-08!17;UBERON:0002048!1.47e-07!14;UBERON:0000117!1.47e-07!14;UBERON:0000171!1.47e-07!14;UBERON:0000170!1.47e-07!14;UBERON:0005597!1.47e-07!14;UBERON:0000118!1.47e-07!14;UBERON:0002368!1.98e-07!60;UBERON:0004119!3.25e-07!130;UBERON:0000925!3.25e-07!130;UBERON:0006595!3.25e-07!130;UBERON:0001007!5.36e-07!128;UBERON:0001555!5.36e-07!128;UBERON:0007026!5.36e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.01e-22,80;UBERON:0002365,3.06e-20,25;UBERON:0002330,3.06e-20,25;UBERON:0009569,9.41e-19,66;UBERON:0005911,9.92e-19,69;UBERON:0002107,2.23e-18,22;UBERON:0007499,2.23e-18,22;UBERON:0006925,2.23e-18,22;UBERON:0009497,2.23e-18,22;UBERON:0000015,2.23e-18,22;UBERON:0002423,2.23e-18,22;UBERON:0006235,2.23e-18,22;UBERON:0008835,2.23e-18,22;UBERON:0003894,2.23e-18,22;UBERON:0004161,2.23e-18,22;UBERON:0008836,2.23e-18,22;UBERON:0005177,2.72e-17,79;UBERON:0009854,2.98e-17,23;UBERON:0009856,2.98e-17,23;UBERON:0002100,2.16e-13,90;UBERON:0004921,1.33e-11,114;UBERON:0004119,2.70e-11,118;UBERON:0000925,2.70e-11,118;UBERON:0006595,2.70e-11,118;UBERON:0005172,2.74e-11,49;UBERON:0005173,2.74e-11,49;UBERON:0002417,2.74e-11,49;UBERON:0000916,2.74e-11,49;UBERON:0001007,3.87e-11,116;UBERON:0001555,3.87e-11,116;UBERON:0007026,3.87e-11,116;UBERON:0005153,4.92e-11,17;UBERON:0002048,6.05e-11,14;UBERON:0000117,6.05e-11,14;UBERON:0000171,6.05e-11,14;UBERON:0000170,6.05e-11,14;UBERON:0005597,6.05e-11,14;UBERON:0000118,6.05e-11,14;UBERON:0001048,1.79e-10,134;UBERON:0003929,3.65e-10,55;UBERON:0002530,4.83e-10,65;UBERON:0002368,3.13e-09,60;UBERON:0000949,6.59e-09,72;UBERON:0005157,1.07e-08,20;UBERON:0005178,2.57e-08,17;UBERON:0005181,2.57e-08,17;UBERON:0002224,2.57e-08,17;UBERON:0000915,2.57e-08,17;UBERON:0008947,2.57e-08,17;UBERON:0003258,2.57e-08,17;UBERON:0001004,1.20e-07,42;UBERON:0002193,1.74e-07,48;UBERON:0002405,1.74e-07,48;UBERON:0002390,2.13e-07,45;UBERON:0003061,2.13e-07,45;UBERON:0000065,4.03e-07,41;UBERON:0000490,5.32e-07,66;UBERON:0005256,7.36e-07,45
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,8.66085380720723,5.06188168474565,0.699561878128147,3.3123527362615,2.33094537129756,1.69755860719212,0.680346321208558,0,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0,17.997994345628,22.7439263390404,31.2611250576284,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.427115042397309,0,0,0,0.289864488701678,12.0459342777394,0.679971333707751,3.2382191498269,3.89865850468601,2.24013443548668,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,3.9964357901671,34.4387385250738,0.890652834388949,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,1.25666591329675,0.247194967734374,3.47038456607788,1.76922110389975,0.161766849947409,1.76673214768315,1.93950101254089,0,0,0.209446706813455,1.27728527604296,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0,0,0.101839363850316,1.49288364732112,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0.570676878337677,0,0.329397909448022,0.251335208800269,0.795825888164603,0.974820435595601,0,0,0,0,0.456994050438915,1.1270773567308,0,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0.156998727841375,0.246794327843601,23.1233049127976,3.17005700860579,5.70021085828289,6.52100125916076,7.70868461276311,10.3706178693539,11.2035374783825,10.9324532231308,5.35046248357617,9.06052663520669,17.2521847832825,18.6070473834252,11.8574315783533,18.185679212192,8.43167843552987,12.0610880340842,3.8798169934987,0.189491411770485,3.09633455239849,2.71592137240301,6.10194645550105,5.19269398069629,7.14130922658041,3.31727201358258,4.25614889086716,1.7717175171902,4.78364305972461,7.20998584749247,7.25276923836761,4.91806799177139,0,13.053736411649,1.96705709207614,1.37968373152366,0.321101179975584,0,0,1.00988370881749,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0.645857706783622,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0.370850604021019,21.1879892189337,0,2.96311243791539,4.52084296811258,9.29520748502971,30.656275209674,0,0.139951452323658,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,1.65306911450672,0,0,3.10669656543463,0,0,0,0,0,0,0,0.651021924219751,0.104859344425711,0,0,3.47612232690996,0.405450430580328,0.410843828659309,1.55904987573354,0.358053391334963,2.18549490259391,2.04332264183947,2.80610101631697,1.31256384932592,1.21930890648,1.71404514732629,2.0466154955348,4.04089734889384,0.935015217452552,0,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,1.70174701947806,2.93458427679175,1.65459157605013,0.888986911206461,1.23621034343337,1.60459604795908,0.505394423527595,1.77435509923168,1.32038438970253,1.12369808963859,0.640251524048693,0.689225627467359,0.952587382566147,0.695305955669133,1.15745532278223,0,0.883193520806384,2.05721551431249,0.887379030796687,0.476872379894642,1.16277133305863,1.2234219453993,0.930760686808441,1.09756783723664,0.789209134313529,0.679020569229309,1.68342681497322,0.830445126869219,1.37906275325789,0.818462086339379,0.77468420592983,1.35034627686799,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.882365676478062,2.08681052058379
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,8.66085380720723,5.06188168474565,0.699561878128147,3.3123527362615,2.33094537129756,1.69755860719212,0.680346321208558,0,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0,17.997994345628,22.7439263390404,31.2611250576284,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.427115042397309,0,0,0,0.289864488701678,12.0459342777394,0.679971333707751,3.2382191498269,3.89865850468601,2.24013443548668,3.7919993435573,0,0,0,0.14084341977668,0,0,0,0,0,0,3.9964357901671,34.4387385250738,0.890652834388949,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,1.25666591329675,0.247194967734374,3.47038456607788,1.76922110389975,0.161766849947409,1.76673214768315,1.93950101254089,0,0,0.209446706813455,1.27728527604296,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0,0,0.101839363850316,1.49288364732112,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.590292695242212,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0.570676878337677,0,0.329397909448022,0.251335208800269,0.795825888164603,0.974820435595601,0,0,0,0,0.456994050438915,1.1270773567308,0,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0.156998727841375,0.246794327843601,23.1233049127976,3.17005700860579,5.70021085828289,6.52100125916076,7.70868461276311,10.3706178693539,11.2035374783825,10.9324532231308,5.35046248357617,9.06052663520669,17.2521847832825,18.6070473834252,11.8574315783533,18.185679212192,8.43167843552987,12.0610880340842,3.8798169934987,0.189491411770485,3.09633455239849,2.71592137240301,6.10194645550105,5.19269398069629,7.14130922658041,3.31727201358258,4.25614889086716,1.7717175171902,4.78364305972461,7.20998584749247,7.25276923836761,4.91806799177139,0,13.053736411649,1.96705709207614,1.37968373152366,0.321101179975584,0,0,1.00988370881749,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,1.27099242518292,0.220528398054962,0.16488625294148,0.645857706783622,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,0.370850604021019,21.1879892189337,0,2.96311243791539,4.52084296811258,9.29520748502971,30.656275209674,0,0.139951452323658,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,1.65306911450672,0,0,3.10669656543463,0,0,0,0,0,0,0,0.651021924219751,0.104859344425711,0,0,3.47612232690996,0.405450430580328,0.410843828659309,1.55904987573354,0.358053391334963,2.18549490259391,2.04332264183947,2.80610101631697,1.31256384932592,1.21930890648,1.71404514732629,2.0466154955348,4.04089734889384,0.935015217452552,0,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,1.70174701947806,2.93458427679175,1.65459157605013,0.888986911206461,1.23621034343337,1.60459604795908,0.505394423527595,1.77435509923168,1.32038438970253,1.12369808963859,0.640251524048693,0.689225627467359,0.952587382566147,0.695305955669133,1.15745532278223,0,0.883193520806384,2.05721551431249,0.887379030796687,0.476872379894642,1.16277133305863,1.2234219453993,0.930760686808441,1.09756783723664,0.789209134313529,0.679020569229309,1.68342681497322,0.830445126869219,1.37906275325789,0.818462086339379,0.77468420592983,1.35034627686799,0.249810577937946,0.701794825336225,0.859484216193193,0.191288332068843,0.882365676478062,2.08681052058379
|short_description=p2@Nr1h3
|short_description=p2@Nr1h3
}}
}}

Latest revision as of 02:49, 27 September 2015

Short description:p2@Nr1h3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nr1h3_5end
Coexpression cluster:MCL_coexpression_mm9:3373
Association with transcript: 95bp_to_ENSMUST00000111355_5end
EntrezGene:Nr1h3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nr1h3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H934.44
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B223.12
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H18.43
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A47.21
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G221.19
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H19.30
spleen, neonate N25.CNhs11099.1354-25G330.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
foregut2.01e-2280
exocrine gland3.06e-2025
exocrine system3.06e-2025
subdivision of trunk9.41e-1966
endo-epithelium9.92e-1969
liver2.23e-1822
epithelial sac2.23e-1822
digestive gland2.23e-1822
epithelium of foregut-midgut junction2.23e-1822
anatomical boundary2.23e-1822
hepatobiliary system2.23e-1822
foregut-midgut junction2.23e-1822
hepatic diverticulum2.23e-1822
liver primordium2.23e-1822
septum transversum2.23e-1822
liver bud2.23e-1822
trunk region element2.72e-1779
digestive tract diverticulum2.98e-1723
sac2.98e-1723
trunk2.16e-1390
subdivision of digestive tract1.33e-11114
endoderm-derived structure2.70e-11118
endoderm2.70e-11118
presumptive endoderm2.70e-11118
abdomen element2.74e-1149
abdominal segment element2.74e-1149
abdominal segment of trunk2.74e-1149
abdomen2.74e-1149
digestive system3.87e-11116
digestive tract3.87e-11116
primitive gut3.87e-11116
epithelial bud4.92e-1117
lung6.05e-1114
respiratory tube6.05e-1114
respiration organ6.05e-1114
pair of lungs6.05e-1114
lung primordium6.05e-1114
lung bud6.05e-1114
primordium1.79e-10134
gut epithelium3.65e-1055
gland4.83e-1065
endocrine gland3.13e-0960
endocrine system6.59e-0972
epithelial fold1.07e-0820
thoracic cavity element2.57e-0817
thoracic segment organ2.57e-0817
thoracic cavity2.57e-0817
thoracic segment of trunk2.57e-0817
respiratory primordium2.57e-0817
endoderm of foregut2.57e-0817
respiratory system1.20e-0742
hemolymphoid system1.74e-0748
immune system1.74e-0748
hematopoietic system2.13e-0745
blood island2.13e-0745
respiratory tract4.03e-0741
unilaminar epithelium5.32e-0766
trunk mesenchyme7.36e-0745
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