FFCP PHASE1:Mm9::chr2:92232492..92232553,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19099 | |EntrezGene=19099 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9WVI9,A2AHH3,Q3UI81,Q6GQW8 | |UniProt=Q9WVI9,A2AHH3,Q3UI81,Q6GQW8 | ||
|association_with_transcript=286bp_to_ENSMUST00000168929,NM_001202445,NM_001202446,uc008kxv.2,uc008kxw.2_5end | |association_with_transcript=286bp_to_ENSMUST00000168929,NM_001202445,NM_001202446,uc008kxv.2,uc008kxw.2_5end | ||
|cluster_id=chr2:92232492..92232553,- | |||
|description=CAGE_peak_3_at_Mapk8ip1_5end | |description=CAGE_peak_3_at_Mapk8ip1_5end | ||
|id=chr2:92232492..92232553,- | |id=chr2:92232492..92232553,- | ||
|ontology_enrichment_celltype=CL:0000221!2.05e-11!44;CL:0000133!2.05e-11!44;CL:0002319!6.65e-11!43;CL:0000540!1.54e-10!33;CL:0000047!1.54e-10!33;CL:0000031!1.54e-10!33;CL:0000404!1.54e-10!33;CL:0000055!1.59e-07!50;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.37e-14,44;CL:0000133,9.37e-14,44;CL:0002319,4.18e-13,43;CL:0000540,1.12e-12,33;CL:0000047,1.12e-12,33;CL:0000031,1.12e-12,33;CL:0000404,1.12e-12,33;CL:0000393,3.98e-09,39;CL:0000211,3.98e-09,39;CL:0000107,1.61e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.78e-20!73;UBERON:0005743!1.78e-20!73;UBERON:0000073!4.56e-20!75;UBERON:0001016!4.56e-20!75;UBERON:0004121!2.00e-18!102;UBERON:0000924!2.00e-18!102;UBERON:0006601!2.00e-18!102;UBERON:0002346!2.33e-14!71;UBERON:0003075!2.33e-14!71;UBERON:0007284!2.33e-14!71;UBERON:0000033!4.44e-13!63;UBERON:0001049!3.41e-11!52;UBERON:0005068!3.41e-11!52;UBERON:0006241!3.41e-11!52;UBERON:0007135!3.41e-11!52;UBERON:0000955!1.12e-10!50;UBERON:0006238!1.12e-10!50;UBERON:0002616!2.84e-10!49;UBERON:0003056!7.19e-10!49;UBERON:0000468!1.63e-09!333;UBERON:0003080!7.04e-08!40;UBERON:0002780!2.12e-07!39;UBERON:0001890!2.12e-07!39;UBERON:0006240!2.12e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-22,73;UBERON:0001016,2.83e-21,75;UBERON:0004121,4.61e-20,95;UBERON:0000924,4.61e-20,95;UBERON:0006601,4.61e-20,95;UBERON:0002346,3.75e-15,64;UBERON:0003075,3.75e-15,64;UBERON:0007284,3.75e-15,64;UBERON:0010371,7.17e-14,73;UBERON:0000073,4.01e-12,54;UBERON:0001049,6.52e-11,52;UBERON:0005068,6.52e-11,52;UBERON:0006241,6.52e-11,52;UBERON:0007135,6.52e-11,52;UBERON:0003056,1.70e-09,49;UBERON:0000955,1.59e-08,47;UBERON:0006238,1.59e-08,47;UBERON:0010314,2.17e-08,92;UBERON:0002616,4.40e-08,46;UBERON:0001894,1.29e-07,10;UBERON:0006222,1.29e-07,10;UBERON:0003080,1.57e-07,40;UBERON:0002410,1.61e-07,9;UBERON:0002780,5.60e-07,39;UBERON:0001890,5.60e-07,39;UBERON:0006240,5.60e-07,39 | |||
|phase1_expression=9.12848428497326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,10.6832326626419,2.63623419281366,1.36100929351998,2.09979632438044,0,0,0,0,0,0.286533439938757,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,4.49400165777607,5.76327457982332,0.518448061542388,1.21505344498522,1.05162480675691,4.57041575046086,5.30084498283872,0.979926393719632,1.24599112323707,0,6.60695285996332,4.59674417106676,5.52983519722476,2.50583946687368,1.64677758484337,3.12548022334056,5.862842979029,0,1.5279824777681,2.94628585473668,2.70506193518296,1.67759501242771,0.454357159999104,0.453429360640713,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0,0,0.593768556259299,1.04091196059682,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,3.07357014900077,0.662524555381181,0.969750506270444,0,0.878342391034642,0.628340120440365,0,0,0,0,5.39246301857362,1.83000241127451,1.00523481690292,0.347648640384553,0.767146371990992,4.98691306942944,2.43361894601636,1.01839363850316,0.373220911830279,0,0.841767423545896,2.47228841629137,4.36813998423599,2.52086981727489,1.05493372485001,1.42876648217788,1.5373646434182,1.3118241438362,3.62184719034622,3.88022387279116,0.756424320671277,1.23165786914764,1.7535658594206,0.556094498451196,2.43776516565517,1.23469281844766,1.79130840136644,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.985004784474571,0.729619285912702,0.877199924551994,1.3173006917463,1.74468344388483,1.26173969138476,1.13195073617213,0,0,3.41261200856374,0.696710015581316,0.515469845288373,0.403367049246685,0,0.380451252225118,0,1.15289268306808,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,0,4.1726938209678,2.28497025219458,1.1270773567308,2.03651327845314,2.13347735884388,0.631222379012867,0.505892296994058,0.442830443938806,0.627994911365499,0.370191491765402,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.518054945597687,0,0,0,0,0,8.34863067936518,5.04010252346474,0.163934945376675,6.05930225290495,6.62567260774139,5.85658116444958,13.5716740571663,2.15071918157297,3.56477878531831,2.26461224631066,7.69140333182299,8.47541987942804,6.7198922250909,3.21321316421807,0.425820255624806,2.13678724400706,1.79175655288934,1.31976098378028,1.32745138339963,1.21390318077491,0,0.943025398779491,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0.632073515871632,1.05418608574999,0,8.17055053809091,2.34079422240703,1.16422815404479,3.21505552547388,14.7192393923087,11.5939731441346,11.5184314421485,11.2652031172402,0.23467170806371,0,0,0.16488625294148,1.45317984026315,0.422190474497091,0.119372344003136,0.164140899745061,0.291480836629851,7.78786268444141,0,1.857481811669,1.85194527369712,0,0,0,0,0,0.138199973804424,0,1.26534397432454,0.813277868507395,0.324016022465404,0.836353184057875,0.218362563746178,0.134864346384821,0.909188012978695,0.26175594198403,0.129614973291793,0,0,2.0932316446157,0.992750942742586,1.55560950675238,1.42075805825504,0.675824501963113,0.704143431874524,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0.810900861160657,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0,0,0.579568782096571,0.563047426353546,0.73260649706906,0,0.501572104035363,2.82375921308533,0.460325236507177,2.29158205375759,0.68741272937475,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,1.81256963593682,1.03552062350364,4.8780053364563,2.39414924040619,3.41467211508268,2.18796045361465,3.5634237646757,2.5738091183002,2.44471400581777,3.09052585858341,4.1719497246936,3.79045817645696,4.30914809813408,3.39527414494937,4.21386783614471,3.45735822986294,3.4461281373368,1.90517476513229,2.66533949673168,2.50781986602817,0.824171801606613,2.79677948255355,5.14303878578123,3.19456451086807,4.29185141905178,3.19762116591123,2.4468438907986,2.19997980518359,4.024415403201,3.15683653725411,3.80251518768413,2.24456908663095,1.66089025373844,2.56111654176465,2.45538625901814,2.63392630016142,1.54325288784913,3.49734809113124,2.33931608445408,2.14871054048298,3.06061331310149,2.8676884485537,1.62307484934295 | |phase1_expression=9.12848428497326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,10.6832326626419,2.63623419281366,1.36100929351998,2.09979632438044,0,0,0,0,0,0.286533439938757,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0,0,0,4.49400165777607,5.76327457982332,0.518448061542388,1.21505344498522,1.05162480675691,4.57041575046086,5.30084498283872,0.979926393719632,1.24599112323707,0,6.60695285996332,4.59674417106676,5.52983519722476,2.50583946687368,1.64677758484337,3.12548022334056,5.862842979029,0,1.5279824777681,2.94628585473668,2.70506193518296,1.67759501242771,0.454357159999104,0.453429360640713,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0,0,0.593768556259299,1.04091196059682,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,3.07357014900077,0.662524555381181,0.969750506270444,0,0.878342391034642,0.628340120440365,0,0,0,0,5.39246301857362,1.83000241127451,1.00523481690292,0.347648640384553,0.767146371990992,4.98691306942944,2.43361894601636,1.01839363850316,0.373220911830279,0,0.841767423545896,2.47228841629137,4.36813998423599,2.52086981727489,1.05493372485001,1.42876648217788,1.5373646434182,1.3118241438362,3.62184719034622,3.88022387279116,0.756424320671277,1.23165786914764,1.7535658594206,0.556094498451196,2.43776516565517,1.23469281844766,1.79130840136644,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.985004784474571,0.729619285912702,0.877199924551994,1.3173006917463,1.74468344388483,1.26173969138476,1.13195073617213,0,0,3.41261200856374,0.696710015581316,0.515469845288373,0.403367049246685,0,0.380451252225118,0,1.15289268306808,0.502670417600539,0.596869416123452,0.58489226135736,0,0.216138049874694,0,4.1726938209678,2.28497025219458,1.1270773567308,2.03651327845314,2.13347735884388,0.631222379012867,0.505892296994058,0.442830443938806,0.627994911365499,0.370191491765402,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.648540907100142,0,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0.478364305972461,0.327726629431476,0.518054945597687,0,0,0,0,0,8.34863067936518,5.04010252346474,0.163934945376675,6.05930225290495,6.62567260774139,5.85658116444958,13.5716740571663,2.15071918157297,3.56477878531831,2.26461224631066,7.69140333182299,8.47541987942804,6.7198922250909,3.21321316421807,0.425820255624806,2.13678724400706,1.79175655288934,1.31976098378028,1.32745138339963,1.21390318077491,0,0.943025398779491,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0.632073515871632,1.05418608574999,0,8.17055053809091,2.34079422240703,1.16422815404479,3.21505552547388,14.7192393923087,11.5939731441346,11.5184314421485,11.2652031172402,0.23467170806371,0,0,0.16488625294148,1.45317984026315,0.422190474497091,0.119372344003136,0.164140899745061,0.291480836629851,7.78786268444141,0,1.857481811669,1.85194527369712,0,0,0,0,0,0.138199973804424,0,1.26534397432454,0.813277868507395,0.324016022465404,0.836353184057875,0.218362563746178,0.134864346384821,0.909188012978695,0.26175594198403,0.129614973291793,0,0,2.0932316446157,0.992750942742586,1.55560950675238,1.42075805825504,0.675824501963113,0.704143431874524,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0.810900861160657,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.453460767230423,0,0,0,0.579568782096571,0.563047426353546,0.73260649706906,0,0.501572104035363,2.82375921308533,0.460325236507177,2.29158205375759,0.68741272937475,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,1.81256963593682,1.03552062350364,4.8780053364563,2.39414924040619,3.41467211508268,2.18796045361465,3.5634237646757,2.5738091183002,2.44471400581777,3.09052585858341,4.1719497246936,3.79045817645696,4.30914809813408,3.39527414494937,4.21386783614471,3.45735822986294,3.4461281373368,1.90517476513229,2.66533949673168,2.50781986602817,0.824171801606613,2.79677948255355,5.14303878578123,3.19456451086807,4.29185141905178,3.19762116591123,2.4468438907986,2.19997980518359,4.024415403201,3.15683653725411,3.80251518768413,2.24456908663095,1.66089025373844,2.56111654176465,2.45538625901814,2.63392630016142,1.54325288784913,3.49734809113124,2.33931608445408,2.14871054048298,3.06061331310149,2.8676884485537,1.62307484934295 | ||
|short_description=p3@Mapk8ip1 | |short_description=p3@Mapk8ip1 | ||
}} | }} |
Latest revision as of 03:21, 27 September 2015
Short description: | p3@Mapk8ip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mapk8ip1_5end |
Coexpression cluster: | NA |
Association with transcript: | 286bp_to_ENSMUST00000168929, NM_001202445, NM_001202446, uc008kxv.2, uc008kxw.2_5end |
EntrezGene: | Mapk8ip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.37e-14 | 44 |
neurectodermal cell | 9.37e-14 | 44 |
neural cell | 4.18e-13 | 43 |
neuron | 1.12e-12 | 33 |
neuronal stem cell | 1.12e-12 | 33 |
neuroblast | 1.12e-12 | 33 |
electrically signaling cell | 1.12e-12 | 33 |
electrically responsive cell | 3.98e-09 | 39 |
electrically active cell | 3.98e-09 | 39 |
autonomic neuron | 1.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.76e-22 | 73 |
nervous system | 2.83e-21 | 75 |
ectoderm-derived structure | 4.61e-20 | 95 |
ectoderm | 4.61e-20 | 95 |
presumptive ectoderm | 4.61e-20 | 95 |
neurectoderm | 3.75e-15 | 64 |
neural plate | 3.75e-15 | 64 |
presumptive neural plate | 3.75e-15 | 64 |
ecto-epithelium | 7.17e-14 | 73 |
regional part of nervous system | 4.01e-12 | 54 |
neural tube | 6.52e-11 | 52 |
neural rod | 6.52e-11 | 52 |
future spinal cord | 6.52e-11 | 52 |
neural keel | 6.52e-11 | 52 |
pre-chordal neural plate | 1.70e-09 | 49 |
brain | 1.59e-08 | 47 |
future brain | 1.59e-08 | 47 |
structure with developmental contribution from neural crest | 2.17e-08 | 92 |
regional part of brain | 4.40e-08 | 46 |
diencephalon | 1.29e-07 | 10 |
future diencephalon | 1.29e-07 | 10 |
anterior neural tube | 1.57e-07 | 40 |
autonomic nervous system | 1.61e-07 | 9 |
regional part of forebrain | 5.60e-07 | 39 |
forebrain | 5.60e-07 | 39 |
future forebrain | 5.60e-07 | 39 |