FFCP PHASE1:Mm9::chr10:59812066..59812073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74048 | |EntrezGene=74048 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z7B7 | |UniProt=D3Z7B7 | ||
|association_with_transcript=0bp_to_ENSMUST00000105459,uc007fey.1_5end | |association_with_transcript=0bp_to_ENSMUST00000105459,uc007fey.1_5end | ||
|cluster_id=chr10:59812066..59812073,+ | |||
|description=CAGE_peak_2_at_4632428N05Rik_5end | |description=CAGE_peak_2_at_4632428N05Rik_5end | ||
|id=chr10:59812066..59812073,+ | |id=chr10:59812066..59812073,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.45e-13,3;CL:0000893,6.25e-11,6;CL:0002489,6.25e-11,6;CL:0000898,6.25e-11,6;CL:0000809,6.25e-11,6;CL:0000810,6.25e-11,6;CL:0000895,6.25e-11,6;CL:0000808,6.25e-11,6;CL:0000894,6.25e-11,6;CL:0000806,6.25e-11,6;CL:0000807,6.25e-11,6;CL:0000805,6.25e-11,6;CL:0002425,6.25e-11,6;CL:0002436,6.25e-11,6;CL:0002427,6.25e-11,6;CL:0002428,6.25e-11,6;CL:0002429,6.25e-11,6;CL:0002433,6.25e-11,6;CL:0002431,6.25e-11,6;CL:0002432,6.25e-11,6;CL:0000624,3.06e-08,8;CL:0000791,2.43e-07,9;CL:0000789,2.43e-07,9;CL:0002420,2.43e-07,9;CL:0002419,2.43e-07,9;CL:0000790,2.43e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.29e-14,3;DOID:4045,3.29e-14,3;DOID:0050686,2.49e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.41e-10,29;UBERON:0005057,3.41e-10,29;UBERON:0000981,4.42e-10,4;UBERON:0003608,4.42e-10,4;UBERON:0003826,4.42e-10,4;UBERON:0008202,4.42e-10,4;UBERON:0004381,4.42e-10,4;UBERON:0007273,4.42e-10,4;UBERON:0010912,4.42e-10,4;UBERON:0002513,4.42e-10,4;UBERON:0004375,4.42e-10,4;UBERON:0010740,4.42e-10,4;UBERON:0010363,4.42e-10,4;UBERON:0003860,4.42e-10,4;UBERON:0002428,4.42e-10,4;UBERON:0010742,4.42e-10,4;UBERON:0002495,4.42e-10,4;UBERON:0003464,4.42e-10,4;UBERON:0003606,4.42e-10,4;UBERON:0005893,4.42e-10,4;UBERON:0009749,4.42e-10,4;UBERON:0010712,4.42e-10,4;UBERON:0010886,4.42e-10,4;UBERON:0005254,4.42e-10,4;UBERON:0010885,4.42e-10,4;UBERON:0010881,4.42e-10,4;UBERON:0010882,4.42e-10,4;UBERON:0007844,4.42e-10,4;UBERON:0001441,4.42e-10,4;UBERON:0011249,4.42e-10,4;UBERON:0002091,4.42e-10,4;UBERON:0003285,4.42e-10,4;UBERON:0004288,4.42e-10,4;UBERON:0010129,4.42e-10,4;UBERON:0006234,4.42e-10,4;UBERON:0002390,2.13e-09,45;UBERON:0003061,2.13e-09,45;UBERON:0002193,1.06e-08,48;UBERON:0002405,1.06e-08,48;UBERON:0000926,1.71e-08,120;UBERON:0004120,1.71e-08,120;UBERON:0006603,1.71e-08,120;UBERON:0003081,3.12e-08,87;UBERON:0000077,3.15e-08,35;UBERON:0005418,3.68e-08,5;UBERON:0002472,3.68e-08,5;UBERON:0008784,3.68e-08,5;UBERON:0006058,3.68e-08,5;UBERON:0004709,3.68e-08,5;UBERON:0002529,3.68e-08,5;UBERON:0010538,3.68e-08,5;UBERON:0005420,3.68e-08,5;UBERON:0010758,3.68e-08,5;UBERON:0000978,3.68e-08,5;UBERON:0002103,3.68e-08,5;UBERON:0000376,3.68e-08,5;UBERON:0000154,3.68e-08,5;UBERON:0010709,3.68e-08,5;UBERON:0005730,3.68e-08,5;UBERON:0002370,4.33e-08,23;UBERON:0000974,4.33e-08,23;UBERON:0004807,4.33e-08,23;UBERON:0005058,4.33e-08,23;UBERON:0003351,4.33e-08,23;UBERON:0009113,4.33e-08,23;UBERON:0003295,4.33e-08,23;UBERON:0009722,4.33e-08,23;UBERON:0005562,4.33e-08,23;UBERON:0007690,4.33e-08,23;UBERON:0006562,1.01e-07,24;UBERON:0003408,1.01e-07,24;UBERON:0001557,1.01e-07,24;UBERON:0001042,1.01e-07,24;UBERON:0008814,1.01e-07,24;UBERON:0009145,1.01e-07,24;UBERON:0002204,1.10e-07,32;UBERON:0000075,7.13e-07,6;UBERON:0005856,7.13e-07,6;UBERON:0005866,7.13e-07,6;UBERON:0005863,7.13e-07,6;UBERON:0000072,8.87e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.83025338797167,1.87251621057595,1.02730780935303,1.03703806693937,0,0,0,0.607425802169478,0,0.473193248037357,0,0.42438965179803,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,33.9010620896895,11.720030167857,29.8408534065065,59.9996117791635,40.9827290975067,45.6379731849284,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,3.9554654502679,4.2628806896766,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,0.35333957451034,0,3.84979432242953,2.54805239706646,7.11066703153331,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,5.30766331169925,0.323533699894818,1.76673214768315,2.42437626567611,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,1.49288364732112,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.19609616558497,0.412773735926445,1.11116716421827,0,0,0.457556346413045,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,1.83025338797167,1.87251621057595,1.02730780935303,1.03703806693937,0,0,0,0.607425802169478,0,0.473193248037357,0,0.42438965179803,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,33.9010620896895,11.720030167857,29.8408534065065,59.9996117791635,40.9827290975067,45.6379731849284,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,3.9554654502679,4.2628806896766,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,0.35333957451034,0,3.84979432242953,2.54805239706646,7.11066703153331,0,0,0,0,0.517875767294343,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,5.30766331169925,0.323533699894818,1.76673214768315,2.42437626567611,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,1.49288364732112,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.923765950833023,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,1.19609616558497,0.412773735926445,1.11116716421827,0,0,0.457556346413045,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.463735671240843 | ||
|short_description=p2@4632428N05Rik | |short_description=p2@4632428N05Rik | ||
}} | }} |
Latest revision as of 03:35, 26 September 2015
Short description: | p2@4632428N05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4632428N05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000105459, uc007fey.1_5end |
EntrezGene: | 4632428N05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.45e-13 | 3 |
thymocyte | 6.25e-11 | 6 |
double negative thymocyte | 6.25e-11 | 6 |
naive T cell | 6.25e-11 | 6 |
double-positive, alpha-beta thymocyte | 6.25e-11 | 6 |
CD4-positive, alpha-beta thymocyte | 6.25e-11 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.25e-11 | 6 |
DN4 thymocyte | 6.25e-11 | 6 |
DN1 thymic pro-T cell | 6.25e-11 | 6 |
DN2 thymocyte | 6.25e-11 | 6 |
DN3 thymocyte | 6.25e-11 | 6 |
immature single positive thymocyte | 6.25e-11 | 6 |
early T lineage precursor | 6.25e-11 | 6 |
mature CD4 single-positive thymocyte | 6.25e-11 | 6 |
resting double-positive thymocyte | 6.25e-11 | 6 |
double-positive blast | 6.25e-11 | 6 |
CD69-positive double-positive thymocyte | 6.25e-11 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 6.25e-11 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.25e-11 | 6 |
CD24-positive, CD4 single-positive thymocyte | 6.25e-11 | 6 |
CD4-positive, alpha-beta T cell | 3.06e-08 | 8 |
mature alpha-beta T cell | 2.43e-07 | 9 |
alpha-beta T cell | 2.43e-07 | 9 |
immature T cell | 2.43e-07 | 9 |
mature T cell | 2.43e-07 | 9 |
immature alpha-beta T cell | 2.43e-07 | 9 |
Ontology term | p-value | n |
---|