FFCP PHASE1:Mm9::chr11:105898274..105898286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71833 | |EntrezGene=71833 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_ENSMUST00000106891_5end | |association_with_transcript=60bp_to_ENSMUST00000106891_5end | ||
|cluster_id=chr11:105898274..105898286,+ | |||
|description=CAGE_peak_3_at_Dcaf7_5end | |description=CAGE_peak_3_at_Dcaf7_5end | ||
|id=chr11:105898274..105898286,+ | |id=chr11:105898274..105898286,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.14e-13!33;CL:0000047!1.14e-13!33;CL:0000031!1.14e-13!33;CL:0000404!1.14e-13!33;CL:0000393!4.75e-10!39;CL:0000211!4.75e-10!39;CL:0000117!1.51e-08!23;CL:0000337!1.51e-08!23;CL:0000221!1.89e-08!44;CL:0000133!1.89e-08!44;CL:0002319!5.43e-08!43 | |ontology_enrichment_celltype=CL:0000540!1.14e-13!33;CL:0000047!1.14e-13!33;CL:0000031!1.14e-13!33;CL:0000404!1.14e-13!33;CL:0000393!4.75e-10!39;CL:0000211!4.75e-10!39;CL:0000117!1.51e-08!23;CL:0000337!1.51e-08!23;CL:0000221!1.89e-08!44;CL:0000133!1.89e-08!44;CL:0002319!5.43e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-13,33;CL:0000047,1.30e-13,33;CL:0000031,1.30e-13,33;CL:0000404,1.30e-13,33;CL:0000393,6.88e-10,39;CL:0000211,6.88e-10,39;CL:0000117,1.82e-08,23;CL:0000337,1.82e-08,23;CL:0000221,2.77e-08,44;CL:0000133,2.77e-08,44;CL:0002319,7.91e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.35e-20!73;UBERON:0005743!4.35e-20!73;UBERON:0002346!3.17e-19!71;UBERON:0003075!3.17e-19!71;UBERON:0007284!3.17e-19!71;UBERON:0000073!1.57e-18!75;UBERON:0001016!1.57e-18!75;UBERON:0004121!1.71e-17!102;UBERON:0000924!1.71e-17!102;UBERON:0006601!1.71e-17!102;UBERON:0000033!1.35e-14!63;UBERON:0001049!2.92e-14!52;UBERON:0005068!2.92e-14!52;UBERON:0006241!2.92e-14!52;UBERON:0007135!2.92e-14!52;UBERON:0003056!4.63e-14!49;UBERON:0000955!2.02e-12!50;UBERON:0006238!2.02e-12!50;UBERON:0002616!3.48e-12!49;UBERON:0003080!5.83e-12!40;UBERON:0002780!1.21e-11!39;UBERON:0001890!1.21e-11!39;UBERON:0006240!1.21e-11!39;UBERON:0002020!3.24e-10!34;UBERON:0000153!2.05e-08!94;UBERON:0007811!1.14e-07!86;UBERON:0002791!2.94e-07!29;UBERON:0003528!2.94e-07!29;UBERON:0001893!2.94e-07!29 | |ontology_enrichment_uberon=UBERON:0001017!4.35e-20!73;UBERON:0005743!4.35e-20!73;UBERON:0002346!3.17e-19!71;UBERON:0003075!3.17e-19!71;UBERON:0007284!3.17e-19!71;UBERON:0000073!1.57e-18!75;UBERON:0001016!1.57e-18!75;UBERON:0004121!1.71e-17!102;UBERON:0000924!1.71e-17!102;UBERON:0006601!1.71e-17!102;UBERON:0000033!1.35e-14!63;UBERON:0001049!2.92e-14!52;UBERON:0005068!2.92e-14!52;UBERON:0006241!2.92e-14!52;UBERON:0007135!2.92e-14!52;UBERON:0003056!4.63e-14!49;UBERON:0000955!2.02e-12!50;UBERON:0006238!2.02e-12!50;UBERON:0002616!3.48e-12!49;UBERON:0003080!5.83e-12!40;UBERON:0002780!1.21e-11!39;UBERON:0001890!1.21e-11!39;UBERON:0006240!1.21e-11!39;UBERON:0002020!3.24e-10!34;UBERON:0000153!2.05e-08!94;UBERON:0007811!1.14e-07!86;UBERON:0002791!2.94e-07!29;UBERON:0003528!2.94e-07!29;UBERON:0001893!2.94e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.86e-20,73;UBERON:0001016,2.20e-18,75;UBERON:0002346,3.68e-18,64;UBERON:0003075,3.68e-18,64;UBERON:0007284,3.68e-18,64;UBERON:0004121,2.82e-16,95;UBERON:0000924,2.82e-16,95;UBERON:0006601,2.82e-16,95;UBERON:0000073,2.50e-15,54;UBERON:0010371,1.38e-14,73;UBERON:0001049,3.12e-14,52;UBERON:0005068,3.12e-14,52;UBERON:0006241,3.12e-14,52;UBERON:0007135,3.12e-14,52;UBERON:0003056,4.99e-14,49;UBERON:0010314,3.16e-13,92;UBERON:0003080,6.51e-12,40;UBERON:0002780,1.36e-11,39;UBERON:0001890,1.36e-11,39;UBERON:0006240,1.36e-11,39;UBERON:0000955,2.49e-11,47;UBERON:0006238,2.49e-11,47;UBERON:0002616,4.25e-11,46;UBERON:0002020,3.70e-10,34;UBERON:0003528,3.41e-07,29;UBERON:0002791,3.41e-07,29;UBERON:0001893,3.41e-07,29 | |||
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|phase1_expression=9.44878197918284,1.04692622291808,3.18499467572675,0.30246421130683,2.50447864973174,0.839396359559449,1.63528848416868,0.516493293766305,4.08287294239834,6.08567768437183,0.513653904676515,0.797721589953364,1.19840510951844,0.262261207256992,1.99865857089398,1.82227740650843,2.09868563438444,2.05050407482854,2.33094537129756,0.42438965179803,2.12608225377674,3.77305614563364,5.48519557191764,2.71987118748791,1.14704640533585,2.8711598205751,1.29228598847722,0.861884930743556,0.950117097281869,0.252030129759931,0.886922042621219,8.89042942843484,5.53558308826113,0,1.1554064790051,0.997407872150954,0.816677425049476,0,1.5626706890476,2.09409497589519,0,0.683045484958446,0.971020706062307,1.6366586336825,2.12891555560981,2.56965453026354,2.34717403304412,1.52617609466313,3.07560655828261,1.74986909166855,0.979904951377538,0,2.51673909086605,2.90144856804538,5.71359458542189,0.771778308107841,0.85960031981627,1.54701627683233,12.7459370341547,13.2247744818008,10.1413024560989,1.35537812827653,0,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,3.62913643079672,2.56511282830212,3.15487442027073,28.2794474559766,17.8903518170807,3.1847607795888,2.58782771749238,0.919218786610021,6.60695285996332,5.74593021383345,5.22262213071228,12.0016521834476,12.0763689555181,9.89735404057844,5.862842979029,6.75315132038016,6.72312290217964,22.6864010814724,21.6404954814636,15.6575534493252,0.681535739998656,1.058001841495,2.31891590961342,0,0.679971333707751,2.15881276655127,0,0.896053774194671,0.842666520790511,0.852151612890289,0.779358013808606,0.70667914902068,8.87313544593087,2.56652954828636,0,0,1.08245520505607,0.253359865475099,0.505524445014783,0.45673551887624,2.58937883647172,2.67195850316685,4.8575891494518,6.08930956624282,3.22861696158482,4.22023393547343,5.87943535678524,2.63899841792318,3.70792451601561,0.289198713839823,2.65383165584962,2.26473589926373,1.32504911076236,2.42437626567611,0,1.46390398505774,3.56059401582874,0.510914110417183,4.55297473122497,6.59893004092748,5.33694953706872,5.54225365797844,3.66000482254901,5.52879149296603,4.86708096538374,6.13717097592793,4.57133698031032,6.32740925964255,2.24046600470696,1.24406970610093,1.76905930903572,1.68353484709179,6.50602214813519,4.59804208866946,4.32149111532838,6.17889753126432,5.64702942956021,7.04625461566674,5.528401749024,5.43277078551933,8.62271971731369,5.67318240503458,3.87092473160687,3.5071317188412,3.61461423993277,2.089512999133,2.46938563689532,5.9710280045548,2.80885274925294,4.63226232806487,3.6941254921427,3.52113813310353,6.80125573945179,3.6012412292203,3.31442629819294,1.57411385397923,1.85120535464854,1.62773761325285,1.87791380979733,2.10177616260905,2.13927804887525,0.985004784474571,1.05389452409612,1.02339991197733,0.439100230582101,0.805238512562231,5.46753866266731,6.5858951922742,0.330418782983798,0.793351699990633,9.17139477301506,3.71578674976702,2.57734922644187,2.62188582010345,2.44615848229357,2.66315876557583,1.42358718463353,2.47048432086016,2.01068167040216,1.79060824837036,1.16978452271472,0,1.72910439899755,0.597423819763102,5.31070122668629,4.91268604221834,5.63538678365402,4.2766778847516,4.84881217919064,4.34842083319975,2.90888070771584,1.91893192373483,1.8839847340965,1.97435462274881,0.592905254174298,1.50160595144485,2.75182593158484,1.34917267430912,0.811440485554012,2.65294875727659,0.50925170356284,2.01387296215567,1.29708181420028,1.09824565275233,7.18841032636773,1.86070473834252,1.5601883655728,1.51547326768267,0.358794827043824,0.964887042726734,1.10851914099963,3.22135400009824,4.23708938749267,3.22515662972857,2.58159273117352,3.01511263395268,2.85652369063216,1.17080188714679,3.78324345854858,2.21464689648775,3.50800491046472,0.655453258862952,1.72684981865896,0.867894351489069,6.03165135757089,0,0,0.275936746304732,5.29816946959713,4.57125577709592,2.13115428989678,0.757412781613119,8.83423014365519,8.58965237452605,8.83235930704476,11.709471099675,7.5751549188014,8.77537245445381,12.9539424535966,7.01414058987149,5.53402889125133,4.81981974632711,2.41298144854057,4.62970569534864,4.23506094319298,2.14461159864296,1.32745138339963,4.61283208694465,2.11626489875326,2.82907619633847,2.06711325016541,2.15204603560749,4.39328098385976,1.81766864738753,1.78248689192361,0.948110273807448,0,0,6.46835250932197,7.74262704334634,8.79639049722731,11.1455258216428,8.86701168211368,6.24290861607247,7.40470592709544,13.700922710157,1.87737366450968,1.27099242518292,1.32317038832977,0.49465875882444,1.13025098687134,1.02531972377865,1.43246812803764,1.80554989719567,0.874442509889552,3.33765543618917,2.22132145037209,3.30218988741156,2.40752885580625,1.13021074202815,0.956859594047176,0.915112692826091,7.81900777971734,10.4963589242744,9.81219814011409,0,6.16855187483214,3.65975040828328,3.56417624711944,1.88179466413022,2.83871332870031,1.07891477107857,1.65306911450672,1.57053565190418,0.518459893167171,1.24267862617385,9.01908701894705,4.485496381319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| ||
|short_description=p3@Dcaf7 | |short_description=p3@Dcaf7 | ||
}} | }} |
Latest revision as of 19:59, 26 September 2015
Short description: | p3@Dcaf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dcaf7_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENSMUST00000106891_5end |
EntrezGene: | Dcaf7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.30e-13 | 33 |
neuronal stem cell | 1.30e-13 | 33 |
neuroblast | 1.30e-13 | 33 |
electrically signaling cell | 1.30e-13 | 33 |
electrically responsive cell | 6.88e-10 | 39 |
electrically active cell | 6.88e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.82e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-08 | 23 |
ectodermal cell | 2.77e-08 | 44 |
neurectodermal cell | 2.77e-08 | 44 |
neural cell | 7.91e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.86e-20 | 73 |
nervous system | 2.20e-18 | 75 |
neurectoderm | 3.68e-18 | 64 |
neural plate | 3.68e-18 | 64 |
presumptive neural plate | 3.68e-18 | 64 |
ectoderm-derived structure | 2.82e-16 | 95 |
ectoderm | 2.82e-16 | 95 |
presumptive ectoderm | 2.82e-16 | 95 |
regional part of nervous system | 2.50e-15 | 54 |
ecto-epithelium | 1.38e-14 | 73 |
neural tube | 3.12e-14 | 52 |
neural rod | 3.12e-14 | 52 |
future spinal cord | 3.12e-14 | 52 |
neural keel | 3.12e-14 | 52 |
pre-chordal neural plate | 4.99e-14 | 49 |
structure with developmental contribution from neural crest | 3.16e-13 | 92 |
anterior neural tube | 6.51e-12 | 40 |
regional part of forebrain | 1.36e-11 | 39 |
forebrain | 1.36e-11 | 39 |
future forebrain | 1.36e-11 | 39 |
brain | 2.49e-11 | 47 |
future brain | 2.49e-11 | 47 |
regional part of brain | 4.25e-11 | 46 |
gray matter | 3.70e-10 | 34 |
brain grey matter | 3.41e-07 | 29 |
regional part of telencephalon | 3.41e-07 | 29 |
telencephalon | 3.41e-07 | 29 |