FFCP PHASE1:Mm9::chr4:122673278..122673336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16918 | |EntrezGene=16918 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UIE0 | |UniProt=Q3UIE0 | ||
|association_with_transcript=0bp_to_uc008uop.1_5end | |association_with_transcript=0bp_to_uc008uop.1_5end | ||
|cluster_id=chr4:122673278..122673336,+ | |||
|description=CAGE_peak_1_at_Mycl1_5end | |description=CAGE_peak_1_at_Mycl1_5end | ||
|id=chr4:122673278..122673336,+ | |id=chr4:122673278..122673336,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.09e-11!23;CL:0000337!3.09e-11!23;CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-11,23;CL:0000337,1.09e-11,23;CL:0000540,2.81e-08,33;CL:0000047,2.81e-08,33;CL:0000031,2.81e-08,33;CL:0000404,2.81e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.15e-14!63;UBERON:0003056!2.70e-14!49;UBERON:0002346!1.45e-13!71;UBERON:0003075!1.45e-13!71;UBERON:0007284!1.45e-13!71;UBERON:0004121!1.91e-13!102;UBERON:0000924!1.91e-13!102;UBERON:0006601!1.91e-13!102;UBERON:0001049!2.12e-13!52;UBERON:0005068!2.12e-13!52;UBERON:0006241!2.12e-13!52;UBERON:0007135!2.12e-13!52;UBERON:0001017!1.74e-12!73;UBERON:0005743!1.74e-12!73;UBERON:0002020!1.46e-11!34;UBERON:0000073!1.96e-11!75;UBERON:0001016!1.96e-11!75;UBERON:0003080!3.52e-11!40;UBERON:0002780!5.00e-11!39;UBERON:0001890!5.00e-11!39;UBERON:0006240!5.00e-11!39;UBERON:0000955!1.03e-10!50;UBERON:0006238!1.03e-10!50;UBERON:0002616!1.32e-10!49;UBERON:0002791!4.89e-09!29;UBERON:0003528!4.89e-09!29;UBERON:0001893!4.89e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.31e-18,73;UBERON:0002346,1.32e-16,64;UBERON:0003075,1.32e-16,64;UBERON:0007284,1.32e-16,64;UBERON:0004121,1.74e-15,95;UBERON:0000924,1.74e-15,95;UBERON:0006601,1.74e-15,95;UBERON:0003056,1.27e-14,49;UBERON:0001049,1.06e-13,52;UBERON:0005068,1.06e-13,52;UBERON:0006241,1.06e-13,52;UBERON:0007135,1.06e-13,52;UBERON:0000073,2.38e-13,54;UBERON:0001017,1.40e-12,73;UBERON:0002020,9.50e-12,34;UBERON:0001016,1.73e-11,75;UBERON:0003080,2.25e-11,40;UBERON:0000955,2.71e-11,47;UBERON:0006238,2.71e-11,47;UBERON:0002780,3.25e-11,39;UBERON:0001890,3.25e-11,39;UBERON:0006240,3.25e-11,39;UBERON:0002616,3.45e-11,46;UBERON:0003528,3.98e-09,29;UBERON:0002791,3.98e-09,29;UBERON:0001893,3.98e-09,29 | |||
|phase1_expression=10.5698239089164,6.97950815278722,15.0149748998547,1.81478526784098,3.00537437967808,10.2406355866253,12.6150825921584,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,2.04103896362567,1.19149141441062,0.522399578277871,8.31960598525715,6.42345986988076,10.3361753540704,9.90752591165872,10.9890328669803,6.08074942260396,4.03248207615889,7.98229838359097,0.635030673459631,0,0,8.95440021228951,11.802659820453,9.18762103180661,0,0,0,0,0,0,0.755380907853464,0.405507724878058,4.03802854755699,2.34717403304412,3.92445281484804,0.878744730937887,0.194429899074283,1.25987779462826,0,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,35.8100135721488,25.3915670050576,24.719424736741,1.0165335962074,0,0,0,0.7104801149461,3.29560121570245,4.2264013585371,25.7150238525025,39.1517221161903,36.1758933524377,15.1395021734016,8.83474163806454,29.0303194139441,21.2776945660485,34.0110951045708,1.10115880999389,3.06449611404451,2.61131106535614,32.8396856448183,28.2696818731446,30.7338888628488,4.18774498502071,5.6276261003168,5.04234217663473,9.42811473515737,8.68467252874528,23.8591290656385,0.227178579999552,0.226714680320357,0.289864488701678,0.860423876981386,0.679971333707751,1.07940638327563,2.59910566979068,5.82434953226536,1.40444420131752,0,0,0,7.88723150749411,0,0,0,3.68034769719064,2.28023878927589,2.52762222507392,2.16949371466214,0.776813650941515,0.742210695324124,2.25530924795977,0.608930956624282,2.30615497256059,0.452167921657868,1.05829836422134,0.251333182659351,0.247194967734374,1.73519228303894,0.884610551949874,0.970601099684455,0.662524555381181,0,1.86391761218122,1.17112318804619,2.93225389538837,3.83185582812887,0.479260498023681,0,0.381210681219194,4.04434726393021,2.28750301409313,31.2879336761032,4.34560800480691,4.09144731728529,2.90903262383384,5.51620294430376,4.27725328171328,0.995255764880744,2.27450482590307,1.68353484709179,9.88915366516548,10.8053989083732,11.884100567153,6.0281927134286,19.1182562615231,11.914575986491,13.0245397138023,2.06962696591213,5.6047678162539,5.29497024469894,7.5658983390498,8.11024209982027,8.89751197521913,2.78601733217733,4.93877127379064,1.79130840136644,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.402619256281115,12.8276868624118,43.425746424058,0.660837565967596,0.793351699990633,1.70630600428187,3.48355007790658,2.19074684247559,3.42861991859682,2.00140239460383,1.52180500890047,5.69434873853414,1.97638745668813,1.75934646160189,2.58643413653496,3.50935356814416,2.69645822596266,1.72910439899755,3.78368419183298,3.41402221715547,1.71372768914593,0,2.64746726198909,1.35766741017338,2.17421041659988,0.948548056863859,0.295220295959204,0.31399745568275,0.370191491765402,1.48226313543574,0.667380422864376,0.393117990226406,0.449724224769707,0,0.72353147925725,1.01850340712568,0.287696137450811,0.648540907100142,1.64736847912849,8.62609239164127,3.34926852901653,4.99260276983297,5.80931419278357,2.69096120282868,3.37710464954357,1.84753190166605,3.41084541186873,2.93336957595647,2.03694102930226,0.234690248288502,1.00503754465089,1.42826184531608,1.17080188714679,1.41871629695572,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,1.15719246865209,0,0,0,0.827810238914197,2.40825884981688,5.27452589664914,0,1.00988370881749,2.2085575359138,1.56175497718655,2.80050417052639,0.716906393857656,0.668396022247182,1.98153571552183,1.21443210502468,1.46127928955656,1.58115111178609,3.53453448063988,2.83880170416537,1.42452482933804,3.4206261464251,2.47455184458803,1.32745138339963,2.42780636154981,2.11626489875326,0.188605079755898,2.06711325016541,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,8.8229936075342,9.31382523235832,6.00143698088458,4.78818630834139,3.74574516964348,4.60737257685939,6.39376393140658,1.17335854031855,0.42366414172764,6.17479514553893,5.44124634706884,6.13564821444441,5.30753739367772,12.4147237763262,7.87876318776294,2.62332752966866,2.59595422814714,0.854354403989263,0.619160603889667,0.185194527369712,0.565105371014073,0.27338845544205,0.915112692826091,0,0.139951452323658,0.138199973804424,0.954670618015114,3.47969592939249,5.28630614529807,2.91614420218863,2.92723614420256,2.62035076495413,4.04593039154462,4.05001933054146,0.523511883968059,1.68499465279331,2.4853572523477,0,3.28936401296753,2.97825282822776,3.50012139019286,1.93739735216597,3.54807863530634,4.22486059124714,3.25510962109875,3.04092098834561,0.483168241652012,0,0.948033361884535,1.62180172232131,1.1298205288131,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.381034033274999,0.201652370273681,0.0974578807397524,0,0.701261413089414,2.94749498699775,3.32978930061097,1.16628013592318,1.34307693091263,8.50034213741638,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| ||
|short_description=p1@Mycl1 | |short_description=p1@Mycl1 | ||
}} | }} |
Latest revision as of 07:18, 26 September 2015
Short description: | p1@Mycl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mycl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_uc008uop.1_5end |
EntrezGene: | Mycl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.09e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-11 | 23 |
neuron | 2.81e-08 | 33 |
neuronal stem cell | 2.81e-08 | 33 |
neuroblast | 2.81e-08 | 33 |
electrically signaling cell | 2.81e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.31e-18 | 73 |
neurectoderm | 1.32e-16 | 64 |
neural plate | 1.32e-16 | 64 |
presumptive neural plate | 1.32e-16 | 64 |
ectoderm-derived structure | 1.74e-15 | 95 |
ectoderm | 1.74e-15 | 95 |
presumptive ectoderm | 1.74e-15 | 95 |
pre-chordal neural plate | 1.27e-14 | 49 |
neural tube | 1.06e-13 | 52 |
neural rod | 1.06e-13 | 52 |
future spinal cord | 1.06e-13 | 52 |
neural keel | 1.06e-13 | 52 |
regional part of nervous system | 2.38e-13 | 54 |
central nervous system | 1.40e-12 | 73 |
gray matter | 9.50e-12 | 34 |
nervous system | 1.73e-11 | 75 |
anterior neural tube | 2.25e-11 | 40 |
brain | 2.71e-11 | 47 |
future brain | 2.71e-11 | 47 |
regional part of forebrain | 3.25e-11 | 39 |
forebrain | 3.25e-11 | 39 |
future forebrain | 3.25e-11 | 39 |
regional part of brain | 3.45e-11 | 46 |
brain grey matter | 3.98e-09 | 29 |
regional part of telencephalon | 3.98e-09 | 29 |
telencephalon | 3.98e-09 | 29 |