FFCP PHASE1:Mm9::chr5:81449906..81449917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319387 | |EntrezGene=319387 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_ENSMUST00000148923_5end | |association_with_transcript=-103bp_to_ENSMUST00000148923_5end | ||
|cluster_id=chr5:81449906..81449917,+ | |||
|description=CAGE_peak_14_at_Lphn3_5end | |description=CAGE_peak_14_at_Lphn3_5end | ||
|id=chr5:81449906..81449917,+ | |id=chr5:81449906..81449917,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.46e-12!33;CL:0000047!1.46e-12!33;CL:0000031!1.46e-12!33;CL:0000404!1.46e-12!33;CL:0000221!9.44e-10!44;CL:0000133!9.44e-10!44;CL:0000117!1.39e-09!23;CL:0000337!1.39e-09!23;CL:0002319!1.71e-09!43;CL:0000393!1.17e-08!39;CL:0000211!1.17e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.80e-09,23;CL:0000337,2.80e-09,23;CL:0002612,1.25e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.52e-18!75;UBERON:0001016!4.52e-18!75;UBERON:0001017!1.00e-16!73;UBERON:0005743!1.00e-16!73;UBERON:0004121!4.37e-16!102;UBERON:0000924!4.37e-16!102;UBERON:0006601!4.37e-16!102;UBERON:0002346!1.66e-12!71;UBERON:0003075!1.66e-12!71;UBERON:0007284!1.66e-12!71;UBERON:0001049!1.56e-11!52;UBERON:0005068!1.56e-11!52;UBERON:0006241!1.56e-11!52;UBERON:0007135!1.56e-11!52;UBERON:0000033!2.05e-11!63;UBERON:0000955!4.00e-10!50;UBERON:0006238!4.00e-10!50;UBERON:0003056!1.21e-09!49;UBERON:0002616!1.54e-09!49;UBERON:0003080!6.65e-08!40;UBERON:0002020!1.84e-07!34;UBERON:0002780!2.14e-07!39;UBERON:0001890!2.14e-07!39;UBERON:0006240!2.14e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.57e-13,75;UBERON:0000073,8.16e-13,54;UBERON:0001049,3.93e-12,52;UBERON:0005068,3.93e-12,52;UBERON:0006241,3.93e-12,52;UBERON:0007135,3.93e-12,52;UBERON:0002346,1.47e-11,64;UBERON:0003075,1.47e-11,64;UBERON:0007284,1.47e-11,64;UBERON:0004121,2.39e-11,95;UBERON:0000924,2.39e-11,95;UBERON:0006601,2.39e-11,95;UBERON:0002240,5.77e-11,6;UBERON:0005174,5.77e-11,6;UBERON:0001137,5.77e-11,6;UBERON:0001017,8.55e-11,73;UBERON:0010371,1.41e-09,73;UBERON:0003076,1.54e-09,12;UBERON:0003057,1.54e-09,12;UBERON:0002020,8.88e-09,34;UBERON:0001948,9.23e-09,5;UBERON:0002315,9.23e-09,5;UBERON:0002257,1.25e-08,3;UBERON:0000955,9.39e-08,47;UBERON:0006238,9.39e-08,47 | |||
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| ||
|short_description=p14@Lphn3 | |short_description=p14@Lphn3 | ||
}} | }} |
Latest revision as of 06:06, 26 September 2015
Short description: | p14@Lphn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Lphn3_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENSMUST00000148923_5end |
EntrezGene: | Lphn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.80e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.80e-09 | 23 |
neuron of the ventral spinal cord | 1.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.57e-13 | 75 |
regional part of nervous system | 8.16e-13 | 54 |
neural tube | 3.93e-12 | 52 |
neural rod | 3.93e-12 | 52 |
future spinal cord | 3.93e-12 | 52 |
neural keel | 3.93e-12 | 52 |
neurectoderm | 1.47e-11 | 64 |
neural plate | 1.47e-11 | 64 |
presumptive neural plate | 1.47e-11 | 64 |
ectoderm-derived structure | 2.39e-11 | 95 |
ectoderm | 2.39e-11 | 95 |
presumptive ectoderm | 2.39e-11 | 95 |
spinal cord | 5.77e-11 | 6 |
dorsal region element | 5.77e-11 | 6 |
dorsum | 5.77e-11 | 6 |
central nervous system | 8.55e-11 | 73 |
ecto-epithelium | 1.41e-09 | 73 |
posterior neural tube | 1.54e-09 | 12 |
chordal neural plate | 1.54e-09 | 12 |
gray matter | 8.88e-09 | 34 |
regional part of spinal cord | 9.23e-09 | 5 |
gray matter of spinal cord | 9.23e-09 | 5 |
ventral horn of spinal cord | 1.25e-08 | 3 |
brain | 9.39e-08 | 47 |
future brain | 9.39e-08 | 47 |