Personal tools

FFCP PHASE1:Mm9::chr4:48598099..48598117,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230157
|EntrezGene=230157
|HGNC=
|HGNC=
|MCL_coexpression_id=335
|TSSclassifier=NA
|UniProt=Q6PFE7
|UniProt=Q6PFE7
|association_with_transcript=34bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end
|association_with_transcript=34bp_to_ENSMUST00000107703,NM_021436,uc008svk.1,uc008svl.1_5end
|cluster_id=chr4:48598099..48598117,+
|description=CAGE_peak_6_at_Tmeff1_5end
|description=CAGE_peak_6_at_Tmeff1_5end
|id=chr4:48598099..48598117,+
|id=chr4:48598099..48598117,+
|ontology_enrichment_celltype=CL:0000540!1.90e-14!33;CL:0000047!1.90e-14!33;CL:0000031!1.90e-14!33;CL:0000404!1.90e-14!33;CL:0000393!5.65e-13!39;CL:0000211!5.65e-13!39;CL:0000117!8.28e-13!23;CL:0000337!8.28e-13!23;CL:0002319!4.31e-11!43;CL:0000221!6.13e-11!44;CL:0000133!6.13e-11!44;CL:0000055!1.00e-09!50
|ontology_enrichment_celltype=CL:0000540!1.90e-14!33;CL:0000047!1.90e-14!33;CL:0000031!1.90e-14!33;CL:0000404!1.90e-14!33;CL:0000393!5.65e-13!39;CL:0000211!5.65e-13!39;CL:0000117!8.28e-13!23;CL:0000337!8.28e-13!23;CL:0002319!4.31e-11!43;CL:0000221!6.13e-11!44;CL:0000133!6.13e-11!44;CL:0000055!1.00e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.03e-20,23;CL:0000337,3.03e-20,23;CL:0000540,6.44e-18,33;CL:0000047,6.44e-18,33;CL:0000031,6.44e-18,33;CL:0000404,6.44e-18,33;CL:0000393,4.81e-15,39;CL:0000211,4.81e-15,39;CL:0002319,3.91e-13,43;CL:0000221,1.18e-12,44;CL:0000133,1.18e-12,44;CL:0002609,8.59e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.60e-18!73;UBERON:0005743!5.60e-18!73;UBERON:0000073!1.83e-17!75;UBERON:0001016!1.83e-17!75;UBERON:0004121!1.89e-17!102;UBERON:0000924!1.89e-17!102;UBERON:0006601!1.89e-17!102;UBERON:0002346!3.46e-15!71;UBERON:0003075!3.46e-15!71;UBERON:0007284!3.46e-15!71;UBERON:0003056!6.46e-14!49;UBERON:0000033!1.93e-13!63;UBERON:0002020!3.35e-12!34;UBERON:0001049!4.80e-12!52;UBERON:0005068!4.80e-12!52;UBERON:0006241!4.80e-12!52;UBERON:0007135!4.80e-12!52;UBERON:0003080!8.80e-11!40;UBERON:0000955!1.38e-10!50;UBERON:0006238!1.38e-10!50;UBERON:0002780!1.57e-10!39;UBERON:0001890!1.57e-10!39;UBERON:0006240!1.57e-10!39;UBERON:0002616!1.91e-10!49;UBERON:0002791!1.32e-09!29;UBERON:0003528!1.32e-09!29;UBERON:0001893!1.32e-09!29;UBERON:0000956!9.90e-07!21;UBERON:0001869!9.90e-07!21;UBERON:0000203!9.90e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.66e-18,49;UBERON:0002346,1.30e-17,64;UBERON:0003075,1.30e-17,64;UBERON:0007284,1.30e-17,64;UBERON:0001017,1.33e-17,73;UBERON:0004121,2.77e-17,95;UBERON:0000924,2.77e-17,95;UBERON:0006601,2.77e-17,95;UBERON:0001016,8.37e-17,75;UBERON:0002020,1.04e-16,34;UBERON:0000073,8.22e-16,54;UBERON:0010371,5.80e-15,73;UBERON:0001049,1.50e-14,52;UBERON:0005068,1.50e-14,52;UBERON:0006241,1.50e-14,52;UBERON:0007135,1.50e-14,52;UBERON:0002780,3.12e-14,39;UBERON:0001890,3.12e-14,39;UBERON:0006240,3.12e-14,39;UBERON:0003080,1.11e-13,40;UBERON:0003528,2.58e-13,29;UBERON:0002791,2.58e-13,29;UBERON:0001893,2.58e-13,29;UBERON:0010314,1.72e-12,92;UBERON:0002616,6.26e-12,46;UBERON:0000955,1.65e-11,47;UBERON:0006238,1.65e-11,47;UBERON:0000956,9.21e-09,21;UBERON:0001869,9.21e-09,21;UBERON:0000203,9.21e-09,21
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,1.03134418455488,4.85559506063035,6.34789175126439,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,4.45865332926454,4.3201900266141,3.99617426567626,2.28520787523043,0.883474163806454,4.89963196859816,4.2172007248024,5.51531271966013,1.10115880999389,1.14918604276669,0.768032666281217,8.17694983927202,8.87430142943374,7.8137005583514,1.3959149950069,0,1.68078072554491,2.06240009831567,2.70506193518296,5.59198337475902,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.11418387971906,0,0,1.04091196059682,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,2.63874139437015,0.521472960576829,0.767146371990992,1.0389402227978,2.27137768294861,0.305518091550949,0,0,0.210441855886474,2.34216797332867,2.29902104433473,1.62055916824814,1.20563854268572,1.42876648217788,1.15302348256365,1.12442069471675,0.517406741478031,1.29340795759705,1.51284864134255,1.05570674498369,0.43839146485515,0.278047249225598,0,0.205782136407943,1.39323986772945,0,0,0,1.24275463521301,1.17263029990548,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,1.05144974282064,4.42489833230923,0,0,1.70630600428187,1.39342003116263,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,0,0.610953983535943,0.387904974335251,0.561086559122548,0.252946148497029,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.975668239288994,0.472905432318573,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.481651769963376,1.17211686592203,0.819674726883377,0,0.315508219416257,0.390438744296638,0.861693590931196,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,1.75353514746787,1.58115111178609,0.642642632843614,0.141940085208269,0.35613120733451,1.46598263418218,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,1.8006109403131,1.55230420539305,0.857348140126369,1.41872186913819,0.535106452806212,0.329098041204242,0,0,1.0591603543191,0,0,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,1.73984796469624,0.406638934253697,1.08005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,9.58277995763124,1.04661582230785,0.496375471371293,0.972255941720238,0.516639293910924,0.675824501963113,0.234714477291508,0.2604087696879,0.838874755405687,0.966336483304024,6.91272015018877,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.538283139656854,0.503653849092235,0,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,2.07104124700728,1.66059756134683,2.39414924040619,1.87806966329548,0.486213434136588,1.04806581313991,0.367687016900028,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,1.08842759088278,0.976402972245426,1.90517476513229,0.695305955669133,0.964546102318525,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.953744759789284,1.16277133305863,0.658765662907314,0.761531471025089,1.09756783723664,1.05227884575137,0.407412341537585,1.12228454331548,0.949080144993393,0.788035859004508,0.409231043169689,0.77468420592983,0.771626443924566,1.49886346762768,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,1.03134418455488,4.85559506063035,6.34789175126439,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,4.45865332926454,4.3201900266141,3.99617426567626,2.28520787523043,0.883474163806454,4.89963196859816,4.2172007248024,5.51531271966013,1.10115880999389,1.14918604276669,0.768032666281217,8.17694983927202,8.87430142943374,7.8137005583514,1.3959149950069,0,1.68078072554491,2.06240009831567,2.70506193518296,5.59198337475902,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.11418387971906,0,0,1.04091196059682,0.608930956624282,0.691846491768175,0.60289056221049,0.470354828542819,0.125666591329675,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,2.63874139437015,0.521472960576829,0.767146371990992,1.0389402227978,2.27137768294861,0.305518091550949,0,0,0.210441855886474,2.34216797332867,2.29902104433473,1.62055916824814,1.20563854268572,1.42876648217788,1.15302348256365,1.12442069471675,0.517406741478031,1.29340795759705,1.51284864134255,1.05570674498369,0.43839146485515,0.278047249225598,0,0.205782136407943,1.39323986772945,0,0,0,1.24275463521301,1.17263029990548,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,1.05144974282064,4.42489833230923,0,0,1.70630600428187,1.39342003116263,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.456994050438915,0,0.610953983535943,0.387904974335251,0.561086559122548,0.252946148497029,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.162964976442026,0.339490171550376,0.704070744865506,0.502518772325447,0.476087281772027,0.975668239288994,0.472905432318573,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0.481651769963376,1.17211686592203,0.819674726883377,0,0.315508219416257,0.390438744296638,0.861693590931196,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,1.75353514746787,1.58115111178609,0.642642632843614,0.141940085208269,0.35613120733451,1.46598263418218,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,1.8006109403131,1.55230420539305,0.857348140126369,1.41872186913819,0.535106452806212,0.329098041204242,0,0,1.0591603543191,0,0,0,0.180938774784468,0.238744688006273,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,1.73984796469624,0.406638934253697,1.08005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,9.58277995763124,1.04661582230785,0.496375471371293,0.972255941720238,0.516639293910924,0.675824501963113,0.234714477291508,0.2604087696879,0.838874755405687,0.966336483304024,6.91272015018877,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.538283139656854,0.503653849092235,0,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,0,1.35096360967266,0.906284817968409,2.07104124700728,1.66059756134683,2.39414924040619,1.87806966329548,0.486213434136588,1.04806581313991,0.367687016900028,0.888986911206461,1.03017528619447,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,1.08842759088278,0.976402972245426,1.90517476513229,0.695305955669133,0.964546102318525,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.953744759789284,1.16277133305863,0.658765662907314,0.761531471025089,1.09756783723664,1.05227884575137,0.407412341537585,1.12228454331548,0.949080144993393,0.788035859004508,0.409231043169689,0.77468420592983,0.771626443924566,1.49886346762768,0.701794825336225,1.07435527024149,0.191288332068843,0,0
|short_description=p6@Tmeff1
|short_description=p6@Tmeff1
}}
}}

Latest revision as of 01:54, 27 September 2015

Short description:p6@Tmeff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Tmeff1_5end
Coexpression cluster:MCL_coexpression_mm9:335
Association with transcript: 34bp_to_ENSMUST00000107703, NM_021436, uc008svk.1, uc008svl.1_5end
EntrezGene:Tmeff1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Tmeff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.66e-1849
neurectoderm1.30e-1764
neural plate1.30e-1764
presumptive neural plate1.30e-1764
central nervous system1.33e-1773
ectoderm-derived structure2.77e-1795
ectoderm2.77e-1795
presumptive ectoderm2.77e-1795
nervous system8.37e-1775
gray matter1.04e-1634
regional part of nervous system8.22e-1654
ecto-epithelium5.80e-1573
neural tube1.50e-1452
neural rod1.50e-1452
future spinal cord1.50e-1452
neural keel1.50e-1452
regional part of forebrain3.12e-1439
forebrain3.12e-1439
future forebrain3.12e-1439
anterior neural tube1.11e-1340
brain grey matter2.58e-1329
regional part of telencephalon2.58e-1329
telencephalon2.58e-1329
structure with developmental contribution from neural crest1.72e-1292
regional part of brain6.26e-1246
brain1.65e-1147
future brain1.65e-1147
cerebral cortex9.21e-0921
cerebral hemisphere9.21e-0921
pallium9.21e-0921
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:48598099..48598117,%2B&oldid=4286219"