FFCP PHASE1:Hg19::chr1:33366931..33367007,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.86e-31!254;CL:0000220!3.84e-15!246;CL:0002321!4.45e-15!248;CL:0000076!5.71e-12!62;CL:0002076!5.40e-11!43;CL:0000223!5.07e-09!59;CL:0002368!1.03e-07!13;CL:1000497!3.84e-07!18;CL:0002518!3.84e-07!18 | |ontology_enrichment_celltype=CL:0000066!3.86e-31!254;CL:0000220!3.84e-15!246;CL:0002321!4.45e-15!248;CL:0000076!5.71e-12!62;CL:0002076!5.40e-11!43;CL:0000223!5.07e-09!59;CL:0002368!1.03e-07!13;CL:1000497!3.84e-07!18;CL:0002518!3.84e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.99e-08;42!CL:0002368;1.06e-07;13!CL:1000497;1.15e-07;17!CL:0002518;1.15e-07;17 | |ontology_enrichment_celltype_v019=CL:0002076;1.99e-08;42!CL:0002368;1.06e-07;13!CL:1000497;1.15e-07;17!CL:0002518;1.15e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.48e-31,253;CL:0002321,8.81e-15,250;CL:0000076,8.52e-12,63;CL:0002076,2.59e-11,42;CL:0000223,6.97e-09,58;CL:0002368,9.72e-08,13;CL:1000497,1.10e-07,17;CL:0002518,1.10e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.23e-08!143;DOID:305!2.46e-08!106 | |ontology_enrichment_disease=DOID:0050687!2.23e-08!143;DOID:305!2.46e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.79e-08,143;DOID:305,5.00e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.74e-21!169;UBERON:0000925!1.74e-21!169;UBERON:0006595!1.74e-21!169;UBERON:0000475!2.59e-18!365;UBERON:0000481!4.23e-17!347;UBERON:0001007!7.60e-16!155;UBERON:0001555!7.60e-16!155;UBERON:0007026!7.60e-16!155;UBERON:0002100!6.42e-15!216;UBERON:0000064!5.58e-14!219;UBERON:0000464!2.78e-13!104;UBERON:0003104!4.57e-13!238;UBERON:0009142!4.57e-13!238;UBERON:0000483!7.69e-13!309;UBERON:0000468!1.23e-12!659;UBERON:0000119!1.99e-12!312;UBERON:0000077!1.09e-11!130;UBERON:0000466!1.79e-11!126;UBERON:0004111!3.61e-11!241;UBERON:0000467!6.57e-11!625;UBERON:0009569!7.19e-11!113;UBERON:0000480!9.93e-11!626;UBERON:0004921!1.57e-10!129;UBERON:0004185!1.57e-10!129;UBERON:0005177!3.49e-10!107;UBERON:0001008!3.53e-10!45;UBERON:0000922!5.89e-10!612;UBERON:0006554!7.92e-10!44;UBERON:0002050!1.37e-09!605;UBERON:0005423!1.37e-09!605;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0003064!9.42e-09!37;UBERON:0000477!1.51e-08!286;UBERON:0005911!2.55e-08!82;UBERON:0005157!2.61e-08!51;UBERON:0000915!3.01e-08!52;UBERON:0000062!3.63e-08!511;UBERON:0005178!5.24e-08!34;UBERON:0002224!5.24e-08!34;UBERON:0003102!6.76e-08!95;UBERON:0005153!9.25e-08!37;UBERON:0000161!1.40e-07!35;UBERON:0005181!1.41e-07!35;UBERON:0001004!4.14e-07!72;UBERON:0002553!7.26e-07!70;UBERON:0000058!8.33e-07!26;UBERON:0005256!9.44e-07!143 | |ontology_enrichment_uberon=UBERON:0004119!1.74e-21!169;UBERON:0000925!1.74e-21!169;UBERON:0006595!1.74e-21!169;UBERON:0000475!2.59e-18!365;UBERON:0000481!4.23e-17!347;UBERON:0001007!7.60e-16!155;UBERON:0001555!7.60e-16!155;UBERON:0007026!7.60e-16!155;UBERON:0002100!6.42e-15!216;UBERON:0000064!5.58e-14!219;UBERON:0000464!2.78e-13!104;UBERON:0003104!4.57e-13!238;UBERON:0009142!4.57e-13!238;UBERON:0000483!7.69e-13!309;UBERON:0000468!1.23e-12!659;UBERON:0000119!1.99e-12!312;UBERON:0000077!1.09e-11!130;UBERON:0000466!1.79e-11!126;UBERON:0004111!3.61e-11!241;UBERON:0000467!6.57e-11!625;UBERON:0009569!7.19e-11!113;UBERON:0000480!9.93e-11!626;UBERON:0004921!1.57e-10!129;UBERON:0004185!1.57e-10!129;UBERON:0005177!3.49e-10!107;UBERON:0001008!3.53e-10!45;UBERON:0000922!5.89e-10!612;UBERON:0006554!7.92e-10!44;UBERON:0002050!1.37e-09!605;UBERON:0005423!1.37e-09!605;UBERON:0000923!2.08e-09!604;UBERON:0005291!2.08e-09!604;UBERON:0006598!2.08e-09!604;UBERON:0002532!2.08e-09!604;UBERON:0003064!9.42e-09!37;UBERON:0000477!1.51e-08!286;UBERON:0005911!2.55e-08!82;UBERON:0005157!2.61e-08!51;UBERON:0000915!3.01e-08!52;UBERON:0000062!3.63e-08!511;UBERON:0005178!5.24e-08!34;UBERON:0002224!5.24e-08!34;UBERON:0003102!6.76e-08!95;UBERON:0005153!9.25e-08!37;UBERON:0000161!1.40e-07!35;UBERON:0005181!1.41e-07!35;UBERON:0001004!4.14e-07!72;UBERON:0002553!7.26e-07!70;UBERON:0000058!8.33e-07!26;UBERON:0005256!9.44e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0005911;2.65e-08;36!UBERON:0006554;4.32e-08;30!UBERON:0001008;4.32e-08;30!UBERON:0001555;1.85e-07;54!UBERON:0005178;3.08e-07;34!UBERON:0002224;3.08e-07;34!UBERON:0005181;5.74e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0005911;2.65e-08;36!UBERON:0006554;4.32e-08;30!UBERON:0001008;4.32e-08;30!UBERON:0001555;1.85e-07;54!UBERON:0005178;3.08e-07;34!UBERON:0002224;3.08e-07;34!UBERON:0005181;5.74e-07;35 | ||
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|short_description=p1@TMEM54 | |short_description=p1@TMEM54 | ||
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Revision as of 01:07, 17 November 2012
Short description: | p1@TMEM54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329151, ENST00000373463, ENST00000474144, NM_033504, uc001bwi.1, uc001bwj.1, uc001bwk.1_5end |
EntrezGene: | TMEM54 |
HGNC: | 24143 |
UniProt: | Q969K7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.48e-31 | 253 |
embryonic cell | 8.81e-15 | 250 |
squamous epithelial cell | 8.52e-12 | 63 |
endo-epithelial cell | 2.59e-11 | 42 |
endodermal cell | 6.97e-09 | 58 |
respiratory epithelial cell | 9.72e-08 | 13 |
kidney cell | 1.10e-07 | 17 |
kidney epithelial cell | 1.10e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.33e-19 | 160 |
endoderm | 3.33e-19 | 160 |
presumptive endoderm | 3.33e-19 | 160 |
digestive system | 5.85e-14 | 145 |
digestive tract | 5.85e-14 | 145 |
primitive gut | 5.85e-14 | 145 |
trunk | 7.70e-14 | 199 |
renal system | 8.95e-13 | 48 |
urinary system structure | 2.09e-12 | 47 |
epithelium | 3.83e-12 | 306 |
cell layer | 9.64e-12 | 309 |
anatomical conduit | 3.50e-11 | 240 |
trunk region element | 4.52e-11 | 101 |
subdivision of trunk | 9.32e-11 | 112 |
subdivision of digestive tract | 1.13e-08 | 118 |
embryo | 1.26e-08 | 592 |
surface structure | 1.49e-08 | 99 |
epithelial fold | 1.50e-08 | 47 |
thoracic segment of trunk | 3.33e-08 | 52 |
endo-epithelium | 4.99e-08 | 82 |
thoracic cavity element | 6.00e-08 | 34 |
thoracic cavity | 6.00e-08 | 34 |
orifice | 7.76e-08 | 36 |
epithelial bud | 8.76e-08 | 37 |
developing anatomical structure | 9.44e-08 | 581 |
thoracic segment organ | 1.61e-07 | 35 |
respiratory system | 4.15e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.79e-08 | 143 |
carcinoma | 5.00e-08 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.