FFCP PHASE1:Hg19::chr14:106653357..106653369,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!7.66e-14!25;CL:0000827!7.66e-14!25;CL:0000842!1.14e-10!3;CL:0002127!3.87e-09!1;CL:0000914!3.87e-09!1;CL:0000911!3.87e-09!1;CL:0000814!3.87e-09!1;CL:0002042!3.87e-09!1;CL:0002039!3.87e-09!1;CL:0002040!3.87e-09!1;CL:0002041!3.87e-09!1;CL:0000946!7.18e-09!1;CL:0000786!7.18e-09!1;CL:0000980!7.18e-09!1;CL:0000224!3.22e-08!4;CL:0000838!4.26e-08!52;CL:0000542!6.36e-08!53;CL:0000051!6.36e-08!53 | |ontology_enrichment_celltype=CL:0000084!7.66e-14!25;CL:0000827!7.66e-14!25;CL:0000842!1.14e-10!3;CL:0002127!3.87e-09!1;CL:0000914!3.87e-09!1;CL:0000911!3.87e-09!1;CL:0000814!3.87e-09!1;CL:0002042!3.87e-09!1;CL:0002039!3.87e-09!1;CL:0002040!3.87e-09!1;CL:0002041!3.87e-09!1;CL:0000946!7.18e-09!1;CL:0000786!7.18e-09!1;CL:0000980!7.18e-09!1;CL:0000224!3.22e-08!4;CL:0000838!4.26e-08!52;CL:0000542!6.36e-08!53;CL:0000051!6.36e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.06e-34;1!CL:0000911;7.06e-34;1!CL:0000814;7.06e-34;1!CL:0000084;1.44e-12;25!CL:0000791;2.70e-08;18!CL:0000789;2.70e-08;18!CL:0002419;2.70e-08;18 | |ontology_enrichment_celltype_v019=CL:0002127;7.06e-34;1!CL:0000911;7.06e-34;1!CL:0000814;7.06e-34;1!CL:0000084;1.44e-12;25!CL:0000791;2.70e-08;18!CL:0000789;2.70e-08;18!CL:0002419;2.70e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.05e-34,1;CL:0000914,5.05e-34,1;CL:0000911,5.05e-34,1;CL:0000814,5.05e-34,1;CL:0002042,5.05e-34,1;CL:0002039,5.05e-34,1;CL:0002040,5.05e-34,1;CL:0002041,5.05e-34,1;CL:0000893,9.07e-18,2;CL:0002489,9.07e-18,2;CL:0000809,9.07e-18,2;CL:0000808,9.07e-18,2;CL:0000894,9.07e-18,2;CL:0000806,9.07e-18,2;CL:0000807,9.07e-18,2;CL:0000805,9.07e-18,2;CL:0002425,9.07e-18,2;CL:0000084,1.44e-12,25;CL:0000827,1.44e-12,25;CL:0000791,2.61e-08,18;CL:0000789,2.61e-08,18;CL:0002420,2.61e-08,18;CL:0002419,2.61e-08,18;CL:0000790,2.61e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002425;1.07e-17;2!CL:0000790;2.70e-08;18 | |ontology_enrichment_development_v019=CL:0002425;1.07e-17;2!CL:0000790;2.70e-08;18 | ||
|ontology_enrichment_disease=DOID:2531!2.76e-08!51;DOID:0060083!2.76e-08!51;DOID:0060058!2.37e-07!10 | |ontology_enrichment_disease=DOID:2531!2.76e-08!51;DOID:0060083!2.76e-08!51;DOID:0060058!2.37e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr14:106653357..106653369,+ | |short_description=p@chr14:106653357..106653369,+ | ||
}} | }} |
Revision as of 03:15, 19 November 2012
Short description: | p@chr14:106653357..106653369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:106653357..106653369, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.05e-34 | 1 |
immature NK T cell | 5.05e-34 | 1 |
effector T cell | 5.05e-34 | 1 |
mature NK T cell | 5.05e-34 | 1 |
immature NK T cell stage IV | 5.05e-34 | 1 |
immature NK T cell stage I | 5.05e-34 | 1 |
immature NK T cell stage II | 5.05e-34 | 1 |
immature NK T cell stage III | 5.05e-34 | 1 |
thymocyte | 9.07e-18 | 2 |
double negative thymocyte | 9.07e-18 | 2 |
double-positive, alpha-beta thymocyte | 9.07e-18 | 2 |
DN4 thymocyte | 9.07e-18 | 2 |
DN1 thymic pro-T cell | 9.07e-18 | 2 |
DN2 thymocyte | 9.07e-18 | 2 |
DN3 thymocyte | 9.07e-18 | 2 |
immature single positive thymocyte | 9.07e-18 | 2 |
early T lineage precursor | 9.07e-18 | 2 |
T cell | 1.44e-12 | 25 |
pro-T cell | 1.44e-12 | 25 |
mature alpha-beta T cell | 2.61e-08 | 18 |
alpha-beta T cell | 2.61e-08 | 18 |
immature T cell | 2.61e-08 | 18 |
mature T cell | 2.61e-08 | 18 |
immature alpha-beta T cell | 2.61e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.79e-75 | 7 |
immune organ | 1.79e-75 | 7 |
thymus | 2.01e-74 | 4 |
hemolymphoid system gland | 2.01e-74 | 4 |
thymic region | 2.01e-74 | 4 |
pharyngeal gland | 2.01e-74 | 4 |
thymus primordium | 2.01e-74 | 4 |
pharyngeal epithelium | 5.37e-50 | 6 |
neck | 2.06e-30 | 10 |
gland of gut | 2.06e-30 | 10 |
chordate pharynx | 2.06e-30 | 10 |
pharyngeal region of foregut | 2.06e-30 | 10 |
pharynx | 9.75e-28 | 11 |
entire pharyngeal arch endoderm | 9.75e-28 | 11 |
early pharyngeal endoderm | 9.75e-28 | 11 |
mixed endoderm/mesoderm-derived structure | 7.78e-19 | 29 |
pharyngeal arch system | 2.64e-17 | 18 |
upper respiratory tract | 1.94e-16 | 19 |
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
respiratory system epithelium | 2.06e-11 | 28 |
endocrine gland | 2.81e-09 | 35 |
endocrine system | 2.28e-07 | 45 |
segment of respiratory tract | 4.40e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.