FFCP PHASE1:Hg19::chr17:62340720..62340728,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |ontology_enrichment_celltype_v019=CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.28e-23;1!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!UBERON:0003056;1.21e-08;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.28e-23;1!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!UBERON:0003056;1.21e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.95e-16!94;UBERON:0001016!2.95e-16!94;UBERON:0001893!3.82e-16!34;UBERON:0002020!6.07e-16!34;UBERON:0003528!6.07e-16!34;UBERON:0001869!9.07e-16!32;UBERON:0001049!1.22e-15!57;UBERON:0005068!1.22e-15!57;UBERON:0006241!1.22e-15!57;UBERON:0007135!1.22e-15!57;UBERON:0007023!5.12e-15!115;UBERON:0002791!5.34e-15!33;UBERON:0002616!1.23e-14!59;UBERON:0001017!1.71e-14!82;UBERON:0005743!3.79e-14!86;UBERON:0003075!2.23e-13!86;UBERON:0007284!2.23e-13!86;UBERON:0002346!3.05e-13!90;UBERON:0000955!3.05e-13!69;UBERON:0006238!3.05e-13!69;UBERON:0000924!3.98e-13!173;UBERON:0006601!3.98e-13!173;UBERON:0004121!4.42e-13!169;UBERON:0002780!2.71e-12!41;UBERON:0001890!2.71e-12!41;UBERON:0006240!2.71e-12!41;UBERON:0003080!7.50e-12!42;UBERON:0002619!8.34e-12!22;UBERON:0000956!6.13e-10!25;UBERON:0000203!6.13e-10!25;UBERON:0003056!1.01e-09!61;UBERON:0001950!1.75e-09!20;UBERON:0000064!1.96e-09!219;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0000033!5.26e-08!123;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129 | |ontology_enrichment_uberon=UBERON:0000073!2.95e-16!94;UBERON:0001016!2.95e-16!94;UBERON:0001893!3.82e-16!34;UBERON:0002020!6.07e-16!34;UBERON:0003528!6.07e-16!34;UBERON:0001869!9.07e-16!32;UBERON:0001049!1.22e-15!57;UBERON:0005068!1.22e-15!57;UBERON:0006241!1.22e-15!57;UBERON:0007135!1.22e-15!57;UBERON:0007023!5.12e-15!115;UBERON:0002791!5.34e-15!33;UBERON:0002616!1.23e-14!59;UBERON:0001017!1.71e-14!82;UBERON:0005743!3.79e-14!86;UBERON:0003075!2.23e-13!86;UBERON:0007284!2.23e-13!86;UBERON:0002346!3.05e-13!90;UBERON:0000955!3.05e-13!69;UBERON:0006238!3.05e-13!69;UBERON:0000924!3.98e-13!173;UBERON:0006601!3.98e-13!173;UBERON:0004121!4.42e-13!169;UBERON:0002780!2.71e-12!41;UBERON:0001890!2.71e-12!41;UBERON:0006240!2.71e-12!41;UBERON:0003080!7.50e-12!42;UBERON:0002619!8.34e-12!22;UBERON:0000956!6.13e-10!25;UBERON:0000203!6.13e-10!25;UBERON:0003056!1.01e-09!61;UBERON:0001950!1.75e-09!20;UBERON:0000064!1.96e-09!219;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0000033!5.26e-08!123;UBERON:0000153!1.16e-07!129;UBERON:0007811!1.16e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.28e-23;1!UBERON:0001785;3.28e-23;1!UBERON:0002464;3.28e-23;1!UBERON:0004904;3.28e-23;1!UBERON:0001021;3.28e-23;1!UBERON:0001954;2.59e-12;2!UBERON:0003714;2.59e-12;2!UBERON:0005162;2.59e-12;2!UBERON:0000122;2.59e-12;2!UBERON:0003022;2.59e-12;2!UBERON:0002421;2.59e-12;2!UBERON:0002600;2.59e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000941;3.28e-23;1!UBERON:0001785;3.28e-23;1!UBERON:0002464;3.28e-23;1!UBERON:0004904;3.28e-23;1!UBERON:0001021;3.28e-23;1!UBERON:0001954;2.59e-12;2!UBERON:0003714;2.59e-12;2!UBERON:0005162;2.59e-12;2!UBERON:0000122;2.59e-12;2!UBERON:0003022;2.59e-12;2!UBERON:0002421;2.59e-12;2!UBERON:0002600;2.59e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.10e-23,1;UBERON:0001785,4.10e-23,1;UBERON:0002464,4.10e-23,1;UBERON:0004904,4.10e-23,1;UBERON:0001021,4.10e-23,1;UBERON:0003902,4.10e-23,1;UBERON:0005425,4.10e-23,1;UBERON:0001954,2.32e-12,2;UBERON:0003022,2.32e-12,2;UBERON:0002421,2.32e-12,2;UBERON:0002600,2.32e-12,2;UBERON:0003714,2.90e-12,2;UBERON:0005162,2.90e-12,2;UBERON:0000122,2.90e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003135,4.08e-09,11;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4;UBERON:0001781,9.11e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.63723844372141,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.540911356951966,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.463840490809256,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0.110929051536852,0.558867626472451,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0.756215088665154,0.207471757392654,0,1.42769420259154,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0.240724100067505,0,0,0,0.157771562193185,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,2.5006970412019,3.48353369203032,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.63723844372141,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.540911356951966,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.463840490809256,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0.110929051536852,0.558867626472451,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0.756215088665154,0.207471757392654,0,1.42769420259154,0.196295437002051,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0.240724100067505,0,0,0,0.157771562193185,0.271965960763659,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,2.5006970412019,3.48353369203032,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@TEX2 | |short_description=p11@TEX2 | ||
}} | }} |
Revision as of 22:48, 19 November 2012
Short description: | p11@TEX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TEX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000258991, NM_018469, uc002jed.2, uc002jee.2_5end |
EntrezGene: | TEX2 |
HGNC: | 30884 |
UniProt: | Q8IWB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.10e-23 | 1 |
cranial nerve | 4.10e-23 | 1 |
nerve trunk | 4.10e-23 | 1 |
nerve connecting eye with brain | 4.10e-23 | 1 |
nerve | 4.10e-23 | 1 |
retinal neural layer | 4.10e-23 | 1 |
presumptive neural retina | 4.10e-23 | 1 |
Ammon's horn | 2.32e-12 | 2 |
lobe parts of cerebral cortex | 2.32e-12 | 2 |
hippocampal formation | 2.32e-12 | 2 |
limbic lobe | 2.32e-12 | 2 |
neural tissue | 2.90e-12 | 2 |
multi cell component structure | 2.90e-12 | 2 |
neuron projection bundle | 2.90e-12 | 2 |
testis | 3.54e-12 | 8 |
male reproductive organ | 4.08e-09 | 11 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
layer of retina | 9.11e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.