FFCP PHASE1:Hg19::chr10:63995871..63995888,-: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000790;9.94e-39;18!CL:0000051;2.38e-09;53 | |ontology_enrichment_development_v019=CL:0000790;9.94e-39;18!CL:0000051;2.38e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.32e-10!15;UBERON:0000179!2.32e-10!15;UBERON:0000463!2.32e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!2.32e-10!15;UBERON:0000179!2.32e-10!15;UBERON:0000463!2.32e-10!15 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.91e-19,15;UBERON:0000179,2.91e-19,15;UBERON:0000463,2.91e-19,15;UBERON:0002370,2.35e-08,4;UBERON:0005058,2.35e-08,4;UBERON:0009113,2.35e-08,4;UBERON:0003295,2.35e-08,4;UBERON:0005562,2.35e-08,4 | |||
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| ||
|short_description=p4@RTKN2 | |short_description=p4@RTKN2 | ||
}} | }} |
Revision as of 06:21, 20 November 2012
Short description: | p4@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RTKN2_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 133bp_to_ENST00000315289, uc009xpf.1_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q5SVY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.45e-39 | 18 |
alpha-beta T cell | 9.45e-39 | 18 |
immature T cell | 9.45e-39 | 18 |
mature T cell | 9.45e-39 | 18 |
immature alpha-beta T cell | 9.45e-39 | 18 |
T cell | 1.66e-30 | 25 |
pro-T cell | 1.66e-30 | 25 |
CD8-positive, alpha-beta T cell | 6.11e-23 | 11 |
CD4-positive, alpha-beta T cell | 1.85e-20 | 6 |
lymphoid lineage restricted progenitor cell | 3.88e-18 | 52 |
lymphocyte | 1.05e-17 | 53 |
common lymphoid progenitor | 1.05e-17 | 53 |
naive T cell | 2.90e-11 | 3 |
single nucleate cell | 1.86e-10 | 3 |
mononuclear cell | 1.86e-10 | 3 |
nongranular leukocyte | 4.51e-10 | 115 |
natural killer cell | 5.89e-10 | 3 |
pro-NK cell | 5.89e-10 | 3 |
leukocyte | 1.93e-09 | 136 |
regulatory T cell | 2.60e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.60e-08 | 2 |
naive regulatory T cell | 2.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.91e-19 | 15 |
haemolymphatic fluid | 2.91e-19 | 15 |
organism substance | 2.91e-19 | 15 |
thymus | 2.35e-08 | 4 |
hemolymphoid system gland | 2.35e-08 | 4 |
thymic region | 2.35e-08 | 4 |
pharyngeal gland | 2.35e-08 | 4 |
thymus primordium | 2.35e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.