FFCP PHASE1:Hg19::chr1:156084522..156084529,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000144!2.07e-32!625;CL:0002371!7.28e-32!591;CL:0000012!2.38e-31!682;CL:0000548!8.46e-31!679;CL:0000004!8.46e-31!679;CL:0000255!8.46e-31!679;CL:0000055!1.68e-25!180;CL:0000003!4.01e-18!722;CL:0000222!2.91e-17!119;CL:0000057!4.25e-15!75;CL:0000723!1.60e-13!436;CL:0000063!2.30e-13!578;CL:0000183!2.46e-13!59;CL:0000048!2.59e-13!430;CL:0000034!2.06e-12!444;CL:0000220!7.86e-12!246;CL:0000680!1.22e-11!57;CL:0000056!1.22e-11!57;CL:0000355!1.22e-11!57;CL:0000187!2.08e-11!54;CL:0002321!3.51e-11!248;CL:0000393!6.82e-09!60;CL:0000211!6.82e-09!60;CL:0000192!8.93e-09!42;CL:0000514!8.93e-09!42;CL:0002320!1.57e-07!365;CL:0002620!8.30e-07!23;CL:0000359!9.04e-07!32 | |ontology_enrichment_celltype=CL:0000144!2.07e-32!625;CL:0002371!7.28e-32!591;CL:0000012!2.38e-31!682;CL:0000548!8.46e-31!679;CL:0000004!8.46e-31!679;CL:0000255!8.46e-31!679;CL:0000055!1.68e-25!180;CL:0000003!4.01e-18!722;CL:0000222!2.91e-17!119;CL:0000057!4.25e-15!75;CL:0000723!1.60e-13!436;CL:0000063!2.30e-13!578;CL:0000183!2.46e-13!59;CL:0000048!2.59e-13!430;CL:0000034!2.06e-12!444;CL:0000220!7.86e-12!246;CL:0000680!1.22e-11!57;CL:0000056!1.22e-11!57;CL:0000355!1.22e-11!57;CL:0000187!2.08e-11!54;CL:0002321!3.51e-11!248;CL:0000393!6.82e-09!60;CL:0000211!6.82e-09!60;CL:0000192!8.93e-09!42;CL:0000514!8.93e-09!42;CL:0002320!1.57e-07!365;CL:0002620!8.30e-07!23;CL:0000359!9.04e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.30e-07;55!CL:0000192;4.85e-07;43 | |ontology_enrichment_celltype_v019=CL:0000187;3.30e-07;55!CL:0000192;4.85e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.56e-18,121;CL:0000057,6.89e-15,76;CL:0000723,1.87e-14,433;CL:0000048,3.06e-14,427;CL:0000034,3.11e-13,441;CL:0000680,3.47e-12,58;CL:0000056,3.47e-12,58;CL:0000355,3.47e-12,58;CL:0000187,5.91e-12,55;CL:0002321,1.12e-11,250;CL:0000192,2.69e-09,43;CL:0000514,2.69e-09,43;CL:0000393,3.17e-09,61;CL:0000211,3.17e-09,61;CL:0002320,5.08e-08,361;CL:0002620,7.79e-07,23;CL:0000359,8.49e-07,32;CL:0000213,8.58e-07,58;CL:0000215,8.58e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000355;3.78e-07;58!CL:0000514;4.85e-07;43 | |ontology_enrichment_development_v019=CL:0000355;3.78e-07;58!CL:0000514;4.85e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.46e-15!448;UBERON:0004120!3.46e-15!448;UBERON:0006603!3.46e-15!448;UBERON:0000914!5.61e-15!83;UBERON:0002329!5.61e-15!83;UBERON:0003077!5.61e-15!83;UBERON:0003059!5.61e-15!83;UBERON:0007282!5.61e-15!83;UBERON:0009618!5.61e-15!83;UBERON:0007285!5.61e-15!83;UBERON:0004290!1.17e-13!70;UBERON:0000486!5.03e-13!82;UBERON:0002204!2.23e-12!167;UBERON:0003081!4.99e-11!216;UBERON:0005256!5.25e-11!143;UBERON:0004872!5.54e-11!84;UBERON:0001134!1.76e-10!61;UBERON:0002036!1.76e-10!61;UBERON:0003082!1.76e-10!61;UBERON:0002049!3.12e-10!79;UBERON:0007798!3.12e-10!79;UBERON:0001981!7.41e-10!60;UBERON:0007500!7.41e-10!60;UBERON:0004537!7.41e-10!60;UBERON:0006965!7.41e-10!60;UBERON:0001637!9.44e-10!42;UBERON:0003509!9.44e-10!42;UBERON:0004572!9.44e-10!42;UBERON:0002385!1.09e-09!63;UBERON:0001015!1.09e-09!63;UBERON:0000383!1.09e-09!63;UBERON:0000055!1.48e-09!69;UBERON:0003914!2.91e-09!118;UBERON:0002199!4.60e-08!45;UBERON:0002416!4.60e-08!45;UBERON:0002100!6.99e-08!216;UBERON:0003102!1.50e-07!95;UBERON:0004535!1.94e-07!110;UBERON:0002384!2.60e-07!375;UBERON:0004573!2.79e-07!33;UBERON:0004571!2.79e-07!33;UBERON:0003104!3.14e-07!238;UBERON:0009142!3.14e-07!238;UBERON:0001009!3.53e-07!113;UBERON:0000490!6.28e-07!138;UBERON:0002097!7.72e-07!40 | |ontology_enrichment_uberon=UBERON:0000926!3.46e-15!448;UBERON:0004120!3.46e-15!448;UBERON:0006603!3.46e-15!448;UBERON:0000914!5.61e-15!83;UBERON:0002329!5.61e-15!83;UBERON:0003077!5.61e-15!83;UBERON:0003059!5.61e-15!83;UBERON:0007282!5.61e-15!83;UBERON:0009618!5.61e-15!83;UBERON:0007285!5.61e-15!83;UBERON:0004290!1.17e-13!70;UBERON:0000486!5.03e-13!82;UBERON:0002204!2.23e-12!167;UBERON:0003081!4.99e-11!216;UBERON:0005256!5.25e-11!143;UBERON:0004872!5.54e-11!84;UBERON:0001134!1.76e-10!61;UBERON:0002036!1.76e-10!61;UBERON:0003082!1.76e-10!61;UBERON:0002049!3.12e-10!79;UBERON:0007798!3.12e-10!79;UBERON:0001981!7.41e-10!60;UBERON:0007500!7.41e-10!60;UBERON:0004537!7.41e-10!60;UBERON:0006965!7.41e-10!60;UBERON:0001637!9.44e-10!42;UBERON:0003509!9.44e-10!42;UBERON:0004572!9.44e-10!42;UBERON:0002385!1.09e-09!63;UBERON:0001015!1.09e-09!63;UBERON:0000383!1.09e-09!63;UBERON:0000055!1.48e-09!69;UBERON:0003914!2.91e-09!118;UBERON:0002199!4.60e-08!45;UBERON:0002416!4.60e-08!45;UBERON:0002100!6.99e-08!216;UBERON:0003102!1.50e-07!95;UBERON:0004535!1.94e-07!110;UBERON:0002384!2.60e-07!375;UBERON:0004573!2.79e-07!33;UBERON:0004571!2.79e-07!33;UBERON:0003104!3.14e-07!238;UBERON:0009142!3.14e-07!238;UBERON:0001009!3.53e-07!113;UBERON:0000490!6.28e-07!138;UBERON:0002097!7.72e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.37e-07;42!UBERON:0003509;2.37e-07;42!UBERON:0004572;2.37e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0001637;2.37e-07;42!UBERON:0003509;2.37e-07;42!UBERON:0004572;2.37e-07;42 | ||
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| ||
|short_description=p5@LMNA | |short_description=p5@LMNA | ||
}} | }} |
Revision as of 22:16, 20 November 2012
Short description: | p5@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LMNA_5end |
Coexpression cluster: | C1839_Mast_immature_Fibroblast_Mesenchymal_Hair_tenocyte_Keratocytes |
Association with transcript: | 5bp_to_ENST00000292302_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | Q5TCJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.56e-18 | 121 |
fibroblast | 6.89e-15 | 76 |
somatic stem cell | 1.87e-14 | 433 |
multi fate stem cell | 3.06e-14 | 427 |
stem cell | 3.11e-13 | 441 |
muscle precursor cell | 3.47e-12 | 58 |
myoblast | 3.47e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.47e-12 | 58 |
muscle cell | 5.91e-12 | 55 |
embryonic cell | 1.12e-11 | 250 |
smooth muscle cell | 2.69e-09 | 43 |
smooth muscle myoblast | 2.69e-09 | 43 |
electrically responsive cell | 3.17e-09 | 61 |
electrically active cell | 3.17e-09 | 61 |
connective tissue cell | 5.08e-08 | 361 |
skin fibroblast | 7.79e-07 | 23 |
vascular associated smooth muscle cell | 8.49e-07 | 32 |
lining cell | 8.58e-07 | 58 |
barrier cell | 8.58e-07 | 58 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.