FFCP PHASE1:Hg19::chr4:146704036..146704062,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000213!3.15e-16!57;CL:0000215!3.15e-16!57;CL:0005020!2.47e-11!6;CL:0002138!2.47e-11!6;CL:0005022!2.47e-11!6;CL:0000115!1.34e-09!35;CL:0002536!1.54e-09!2;CL:0002139!1.71e-09!24;CL:0000077!2.30e-09!19;CL:0002078!8.54e-09!44;CL:0002537!1.70e-08!5;CL:0000076!6.62e-08!62 | |ontology_enrichment_celltype=CL:0000213!3.15e-16!57;CL:0000215!3.15e-16!57;CL:0005020!2.47e-11!6;CL:0002138!2.47e-11!6;CL:0005022!2.47e-11!6;CL:0000115!1.34e-09!35;CL:0002536!1.54e-09!2;CL:0002139!1.71e-09!24;CL:0000077!2.30e-09!19;CL:0002078!8.54e-09!44;CL:0002537!1.70e-08!5;CL:0000076!6.62e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.10e-28;5!CL:0002138;2.21e-23;6!CL:0000349;2.84e-20;19!CL:0002379;6.47e-17;1!CL:0002188;3.54e-13;5!CL:0000115;8.21e-10;36!CL:1000746;1.11e-09;7!CL:1000612;1.11e-09;7!CL:0002536;4.34e-09;2!CL:0000213;4.43e-07;58!CL:0000215;4.43e-07;58 | |ontology_enrichment_celltype_v019=CL:0002537;2.10e-28;5!CL:0002138;2.21e-23;6!CL:0000349;2.84e-20;19!CL:0002379;6.47e-17;1!CL:0002188;3.54e-13;5!CL:0000115;8.21e-10;36!CL:1000746;1.11e-09;7!CL:1000612;1.11e-09;7!CL:0002536;4.34e-09;2!CL:0000213;4.43e-07;58!CL:0000215;4.43e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.59e-28,5;CL:0005020,3.13e-23,6;CL:0002138,3.13e-23,6;CL:0005022,3.13e-23,6;CL:0000349,2.52e-20,19;CL:0002379,6.47e-17,1;CL:0002188,3.88e-13,5;CL:0000115,1.51e-10,36;CL:1000746,1.18e-09,7;CL:1000612,1.18e-09,7;CL:0000213,3.50e-09,58;CL:0000215,3.50e-09,58;CL:0002536,4.34e-09,2;CL:0002078,1.96e-08,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.21e-23;6 | |ontology_enrichment_development_v019=CL:0005022;2.21e-23;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;6.47e-17;1!DOID:3565;6.47e-17;1 | |ontology_enrichment_disease_v019=DOID:3620;6.47e-17;1!DOID:3565;6.47e-17;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,6.47e-17,1;DOID:3565,6.47e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.87e-28!14;UBERON:0000158!5.87e-28!14;UBERON:0000478!1.89e-15!24;UBERON:0000305!2.10e-15!7;UBERON:0003124!3.18e-14!7;UBERON:0004871!1.96e-13!8;UBERON:0004923!6.38e-11!57;UBERON:0001987!1.29e-09!4;UBERON:0004340!1.29e-09!4;UBERON:0001473!1.66e-08!8;UBERON:0004536!1.66e-08!8;UBERON:0006558!1.66e-08!8;UBERON:0002465!8.36e-07!10 | |ontology_enrichment_uberon=UBERON:0005631!5.87e-28!14;UBERON:0000158!5.87e-28!14;UBERON:0000478!1.89e-15!24;UBERON:0000305!2.10e-15!7;UBERON:0003124!3.18e-14!7;UBERON:0004871!1.96e-13!8;UBERON:0004923!6.38e-11!57;UBERON:0001987!1.29e-09!4;UBERON:0004340!1.29e-09!4;UBERON:0001473!1.66e-08!8;UBERON:0004536!1.66e-08!8;UBERON:0006558!1.66e-08!8;UBERON:0002465!8.36e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.36e-38;10!UBERON:0000158;2.36e-38;10!UBERON:0000305;1.51e-35;7!UBERON:0001473;1.02e-17;8!UBERON:0004536;1.02e-17;8!UBERON:0006558;1.02e-17;8!UBERON:0000478;4.53e-16;24!UBERON:0002465;2.61e-14;10!UBERON:0000074;1.11e-09;7!UBERON:0001229;1.11e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.36e-38;10!UBERON:0000158;2.36e-38;10!UBERON:0000305;1.51e-35;7!UBERON:0001473;1.02e-17;8!UBERON:0004536;1.02e-17;8!UBERON:0006558;1.02e-17;8!UBERON:0000478;4.53e-16;24!UBERON:0002465;2.61e-14;10!UBERON:0000074;1.11e-09;7!UBERON:0001229;1.11e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.16e-35,7;UBERON:0004871,2.87e-31,8;UBERON:0005631,1.58e-27,14;UBERON:0000158,1.58e-27,14;UBERON:0001473,1.32e-17,8;UBERON:0004536,1.32e-17,8;UBERON:0006558,1.32e-17,8;UBERON:0000478,4.12e-16,24;UBERON:0002465,3.20e-14,10;UBERON:0010532,1.18e-09,7;UBERON:0000074,1.18e-09,7;UBERON:0001229,1.18e-09,7;UBERON:0001230,1.18e-09,7;UBERON:0003220,1.18e-09,7;UBERON:0005749,1.18e-09,7;UBERON:0004199,1.18e-09,7;UBERON:0004209,1.18e-09,7;UBERON:0004198,1.18e-09,7;UBERON:0005103,1.47e-08,8;UBERON:0000083,1.47e-08,8;UBERON:0009201,1.47e-08,8;UBERON:0006553,1.47e-08,8;UBERON:0003074,1.47e-08,8;UBERON:0003060,1.47e-08,8;UBERON:0000080,1.05e-07,9;UBERON:0002120,1.05e-07,9;UBERON:0004875,1.05e-07,9;UBERON:0005721,1.05e-07,9;UBERON:0005754,1.05e-07,9;UBERON:0007297,1.05e-07,9 | |||
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| ||
|short_description=p@chr4:146704036..146704062,- | |short_description=p@chr4:146704036..146704062,- | ||
}} | }} |
Revision as of 02:06, 21 November 2012
Short description: | p@chr4:146704036..146704062, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:146704036..146704062, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.59e-28 | 5 |
lymphangioblast | 3.13e-23 | 6 |
endothelial cell of lymphatic vessel | 3.13e-23 | 6 |
vascular lymphangioblast | 3.13e-23 | 6 |
extraembryonic cell | 2.52e-20 | 19 |
meningothelial cell | 6.47e-17 | 1 |
glomerular endothelial cell | 3.88e-13 | 5 |
endothelial cell | 1.51e-10 | 36 |
glomerular cell | 1.18e-09 | 7 |
kidney corpuscule cell | 1.18e-09 | 7 |
lining cell | 3.50e-09 | 58 |
barrier cell | 3.50e-09 | 58 |
amniotic epithelial cell | 4.34e-09 | 2 |
meso-epithelial cell | 1.96e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.16e-35 | 7 |
somatic layer of lateral plate mesoderm | 2.87e-31 | 8 |
extraembryonic membrane | 1.58e-27 | 14 |
membranous layer | 1.58e-27 | 14 |
lymphatic vessel | 1.32e-17 | 8 |
lymph vasculature | 1.32e-17 | 8 |
lymphatic part of lymphoid system | 1.32e-17 | 8 |
extraembryonic structure | 4.12e-16 | 24 |
lymphoid system | 3.20e-14 | 10 |
primitive nephron | 1.18e-09 | 7 |
renal glomerulus | 1.18e-09 | 7 |
renal corpuscle | 1.18e-09 | 7 |
glomerular capsule | 1.18e-09 | 7 |
metanephric mesenchyme | 1.18e-09 | 7 |
glomerular tuft | 1.18e-09 | 7 |
S-shaped body | 1.18e-09 | 7 |
renal vesicle | 1.18e-09 | 7 |
comma-shaped body | 1.18e-09 | 7 |
mesonephric epithelium | 1.47e-08 | 8 |
mesonephric tubule | 1.47e-08 | 8 |
nephric duct | 1.47e-08 | 8 |
renal duct | 1.47e-08 | 8 |
mesonephric duct | 1.47e-08 | 8 |
pronephric duct | 1.47e-08 | 8 |
mesonephros | 1.05e-07 | 9 |
pronephros | 1.05e-07 | 9 |
nephrogenic cord | 1.05e-07 | 9 |
pronephric mesoderm | 1.05e-07 | 9 |
rostral part of nephrogenic cord | 1.05e-07 | 9 |
presumptive pronephric mesoderm | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.47e-17 | 1 |
meningioma | 6.47e-17 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.