FFCP PHASE1:Mm9::chr10:79229617..79229695,-: Difference between revisions
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|id=chr10:79229617..79229695,- | |id=chr10:79229617..79229695,- | ||
|ontology_enrichment_celltype=CL:0002319!5.68e-14!43;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0000117!2.61e-11!23;CL:0000337!2.61e-11!23;CL:0000055!3.23e-11!50;CL:0002321!6.96e-11!70;CL:0000220!6.96e-11!70;CL:0000540!8.92e-11!33;CL:0000047!8.92e-11!33;CL:0000031!8.92e-11!33;CL:0000404!8.92e-11!33;CL:0000393!5.68e-09!39;CL:0000211!5.68e-09!39;CL:0000548!9.32e-09!115;CL:0000004!9.32e-09!115;CL:0000255!9.32e-09!115;CL:0002371!2.52e-07!118 | |ontology_enrichment_celltype=CL:0002319!5.68e-14!43;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0000117!2.61e-11!23;CL:0000337!2.61e-11!23;CL:0000055!3.23e-11!50;CL:0002321!6.96e-11!70;CL:0000220!6.96e-11!70;CL:0000540!8.92e-11!33;CL:0000047!8.92e-11!33;CL:0000031!8.92e-11!33;CL:0000404!8.92e-11!33;CL:0000393!5.68e-09!39;CL:0000211!5.68e-09!39;CL:0000548!9.32e-09!115;CL:0000004!9.32e-09!115;CL:0000255!9.32e-09!115;CL:0002371!2.52e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.68e-14,43;CL:0000221,3.66e-13,44;CL:0000133,3.66e-13,44;CL:0000117,2.61e-11,23;CL:0000337,2.61e-11,23;CL:0002321,6.96e-11,70;CL:0000540,8.92e-11,33;CL:0000047,8.92e-11,33;CL:0000031,8.92e-11,33;CL:0000404,8.92e-11,33;CL:0000393,5.68e-09,39;CL:0000211,5.68e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-17!73;UBERON:0005743!1.77e-17!73;UBERON:0000073!2.72e-17!75;UBERON:0001016!2.72e-17!75;UBERON:0002020!1.02e-14!34;UBERON:0002791!1.85e-12!29;UBERON:0003528!1.85e-12!29;UBERON:0001893!1.85e-12!29;UBERON:0001049!8.14e-12!52;UBERON:0005068!8.14e-12!52;UBERON:0006241!8.14e-12!52;UBERON:0007135!8.14e-12!52;UBERON:0004121!8.97e-12!102;UBERON:0000924!8.97e-12!102;UBERON:0006601!8.97e-12!102;UBERON:0000955!2.63e-11!50;UBERON:0006238!2.63e-11!50;UBERON:0002616!5.19e-11!49;UBERON:0000956!9.92e-10!21;UBERON:0001869!9.92e-10!21;UBERON:0000203!9.92e-10!21;UBERON:0003080!1.73e-09!40;UBERON:0002780!1.96e-09!39;UBERON:0001890!1.96e-09!39;UBERON:0006240!1.96e-09!39;UBERON:0000153!4.44e-09!94;UBERON:0007811!1.57e-08!86;UBERON:0002619!3.44e-08!17;UBERON:0000033!1.53e-07!63;UBERON:0002346!6.40e-07!71;UBERON:0003075!6.40e-07!71;UBERON:0007284!6.40e-07!71;UBERON:0003056!9.30e-07!49 | |ontology_enrichment_uberon=UBERON:0001017!1.77e-17!73;UBERON:0005743!1.77e-17!73;UBERON:0000073!2.72e-17!75;UBERON:0001016!2.72e-17!75;UBERON:0002020!1.02e-14!34;UBERON:0002791!1.85e-12!29;UBERON:0003528!1.85e-12!29;UBERON:0001893!1.85e-12!29;UBERON:0001049!8.14e-12!52;UBERON:0005068!8.14e-12!52;UBERON:0006241!8.14e-12!52;UBERON:0007135!8.14e-12!52;UBERON:0004121!8.97e-12!102;UBERON:0000924!8.97e-12!102;UBERON:0006601!8.97e-12!102;UBERON:0000955!2.63e-11!50;UBERON:0006238!2.63e-11!50;UBERON:0002616!5.19e-11!49;UBERON:0000956!9.92e-10!21;UBERON:0001869!9.92e-10!21;UBERON:0000203!9.92e-10!21;UBERON:0003080!1.73e-09!40;UBERON:0002780!1.96e-09!39;UBERON:0001890!1.96e-09!39;UBERON:0006240!1.96e-09!39;UBERON:0000153!4.44e-09!94;UBERON:0007811!1.57e-08!86;UBERON:0002619!3.44e-08!17;UBERON:0000033!1.53e-07!63;UBERON:0002346!6.40e-07!71;UBERON:0003075!6.40e-07!71;UBERON:0007284!6.40e-07!71;UBERON:0003056!9.30e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.77e-17,73;UBERON:0001016,2.72e-17,75;UBERON:0002020,1.02e-14,34;UBERON:0004121,1.37e-14,95;UBERON:0000924,1.37e-14,95;UBERON:0006601,1.37e-14,95;UBERON:0000073,3.76e-13,54;UBERON:0003528,1.85e-12,29;UBERON:0002791,1.85e-12,29;UBERON:0001893,1.85e-12,29;UBERON:0001049,8.14e-12,52;UBERON:0005068,8.14e-12,52;UBERON:0006241,8.14e-12,52;UBERON:0007135,8.14e-12,52;UBERON:0000955,5.19e-10,47;UBERON:0006238,5.19e-10,47;UBERON:0000956,9.92e-10,21;UBERON:0001869,9.92e-10,21;UBERON:0000203,9.92e-10,21;UBERON:0002616,1.00e-09,46;UBERON:0003080,1.73e-09,40;UBERON:0002346,1.93e-09,64;UBERON:0003075,1.93e-09,64;UBERON:0007284,1.93e-09,64;UBERON:0002780,1.96e-09,39;UBERON:0001890,1.96e-09,39;UBERON:0006240,1.96e-09,39;UBERON:0010371,2.20e-09,73;UBERON:0002619,3.44e-08,17;UBERON:0003056,9.30e-07,49 | |||
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| ||
|short_description=p1@Rnf126 | |short_description=p1@Rnf126 | ||
}} | }} |
Revision as of 00:59, 15 November 2012
Short description: | p1@Rnf126 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rnf126_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000047203, uc007fzr.2, uc011xia.1_5end |
EntrezGene: | Rnf126 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.68e-14 | 43 |
ectodermal cell | 3.66e-13 | 44 |
neurectodermal cell | 3.66e-13 | 44 |
CNS neuron (sensu Vertebrata) | 2.61e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-11 | 23 |
embryonic cell | 6.96e-11 | 70 |
neuron | 8.92e-11 | 33 |
neuronal stem cell | 8.92e-11 | 33 |
neuroblast | 8.92e-11 | 33 |
electrically signaling cell | 8.92e-11 | 33 |
electrically responsive cell | 5.68e-09 | 39 |
electrically active cell | 5.68e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.77e-17 | 73 |
nervous system | 2.72e-17 | 75 |
gray matter | 1.02e-14 | 34 |
ectoderm-derived structure | 1.37e-14 | 95 |
ectoderm | 1.37e-14 | 95 |
presumptive ectoderm | 1.37e-14 | 95 |
regional part of nervous system | 3.76e-13 | 54 |
brain grey matter | 1.85e-12 | 29 |
regional part of telencephalon | 1.85e-12 | 29 |
telencephalon | 1.85e-12 | 29 |
neural tube | 8.14e-12 | 52 |
neural rod | 8.14e-12 | 52 |
future spinal cord | 8.14e-12 | 52 |
neural keel | 8.14e-12 | 52 |
brain | 5.19e-10 | 47 |
future brain | 5.19e-10 | 47 |
cerebral cortex | 9.92e-10 | 21 |
cerebral hemisphere | 9.92e-10 | 21 |
pallium | 9.92e-10 | 21 |
regional part of brain | 1.00e-09 | 46 |
anterior neural tube | 1.73e-09 | 40 |
neurectoderm | 1.93e-09 | 64 |
neural plate | 1.93e-09 | 64 |
presumptive neural plate | 1.93e-09 | 64 |
regional part of forebrain | 1.96e-09 | 39 |
forebrain | 1.96e-09 | 39 |
future forebrain | 1.96e-09 | 39 |
ecto-epithelium | 2.20e-09 | 73 |
regional part of cerebral cortex | 3.44e-08 | 17 |
pre-chordal neural plate | 9.30e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.