FFCP PHASE1:Mm9::chr2:155518091..155518100,-: Difference between revisions
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|id=chr2:155518091..155518100,- | |id=chr2:155518091..155518100,- | ||
|ontology_enrichment_celltype=CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23 | |ontology_enrichment_celltype=CL:0000117!6.43e-10!23;CL:0000337!6.43e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.43e-10,23;CL:0000337,6.43e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.09e-17!63;UBERON:0001049!3.38e-17!52;UBERON:0005068!3.38e-17!52;UBERON:0006241!3.38e-17!52;UBERON:0007135!3.38e-17!52;UBERON:0000955!7.13e-17!50;UBERON:0006238!7.13e-17!50;UBERON:0002616!2.93e-16!49;UBERON:0001017!4.05e-16!73;UBERON:0005743!4.05e-16!73;UBERON:0000073!7.31e-16!75;UBERON:0001016!7.31e-16!75;UBERON:0002346!2.40e-14!71;UBERON:0003075!2.40e-14!71;UBERON:0007284!2.40e-14!71;UBERON:0002020!2.56e-14!34;UBERON:0004121!2.95e-14!102;UBERON:0000924!2.95e-14!102;UBERON:0006601!2.95e-14!102;UBERON:0003080!9.76e-13!40;UBERON:0003056!1.24e-12!49;UBERON:0002791!2.62e-12!29;UBERON:0003528!2.62e-12!29;UBERON:0001893!2.62e-12!29;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0000956!4.01e-08!21;UBERON:0001869!4.01e-08!21;UBERON:0000203!4.01e-08!21;UBERON:0002619!4.48e-07!17 | |ontology_enrichment_uberon=UBERON:0000033!3.09e-17!63;UBERON:0001049!3.38e-17!52;UBERON:0005068!3.38e-17!52;UBERON:0006241!3.38e-17!52;UBERON:0007135!3.38e-17!52;UBERON:0000955!7.13e-17!50;UBERON:0006238!7.13e-17!50;UBERON:0002616!2.93e-16!49;UBERON:0001017!4.05e-16!73;UBERON:0005743!4.05e-16!73;UBERON:0000073!7.31e-16!75;UBERON:0001016!7.31e-16!75;UBERON:0002346!2.40e-14!71;UBERON:0003075!2.40e-14!71;UBERON:0007284!2.40e-14!71;UBERON:0002020!2.56e-14!34;UBERON:0004121!2.95e-14!102;UBERON:0000924!2.95e-14!102;UBERON:0006601!2.95e-14!102;UBERON:0003080!9.76e-13!40;UBERON:0003056!1.24e-12!49;UBERON:0002791!2.62e-12!29;UBERON:0003528!2.62e-12!29;UBERON:0001893!2.62e-12!29;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0000956!4.01e-08!21;UBERON:0001869!4.01e-08!21;UBERON:0000203!4.01e-08!21;UBERON:0002619!4.48e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.16e-18,54;UBERON:0001049,3.51e-17,52;UBERON:0005068,3.51e-17,52;UBERON:0006241,3.51e-17,52;UBERON:0007135,3.51e-17,52;UBERON:0001017,4.18e-16,73;UBERON:0001016,7.54e-16,75;UBERON:0000955,5.44e-15,47;UBERON:0006238,5.44e-15,47;UBERON:0002346,5.94e-15,64;UBERON:0003075,5.94e-15,64;UBERON:0007284,5.94e-15,64;UBERON:0004121,1.84e-14,95;UBERON:0000924,1.84e-14,95;UBERON:0006601,1.84e-14,95;UBERON:0002616,2.14e-14,46;UBERON:0002020,2.56e-14,34;UBERON:0003080,9.76e-13,40;UBERON:0003056,1.23e-12,49;UBERON:0010371,2.31e-12,73;UBERON:0003528,2.62e-12,29;UBERON:0002791,2.62e-12,29;UBERON:0001893,2.62e-12,29;UBERON:0002780,4.32e-12,39;UBERON:0001890,4.32e-12,39;UBERON:0006240,4.32e-12,39;UBERON:0010314,5.54e-09,92;UBERON:0000956,4.01e-08,21;UBERON:0001869,4.01e-08,21;UBERON:0000203,4.01e-08,21;UBERON:0002619,4.48e-07,17 | |||
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| ||
|short_description=p3@Trpc4ap | |short_description=p3@Trpc4ap | ||
}} | }} |
Revision as of 03:02, 14 November 2012
Short description: | p3@Trpc4ap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trpc4ap_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 17bp_to_ENSMUST00000130755_5end |
EntrezGene: | Trpc4ap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.43e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.16e-18 | 54 |
neural tube | 3.51e-17 | 52 |
neural rod | 3.51e-17 | 52 |
future spinal cord | 3.51e-17 | 52 |
neural keel | 3.51e-17 | 52 |
central nervous system | 4.18e-16 | 73 |
nervous system | 7.54e-16 | 75 |
brain | 5.44e-15 | 47 |
future brain | 5.44e-15 | 47 |
neurectoderm | 5.94e-15 | 64 |
neural plate | 5.94e-15 | 64 |
presumptive neural plate | 5.94e-15 | 64 |
ectoderm-derived structure | 1.84e-14 | 95 |
ectoderm | 1.84e-14 | 95 |
presumptive ectoderm | 1.84e-14 | 95 |
regional part of brain | 2.14e-14 | 46 |
gray matter | 2.56e-14 | 34 |
anterior neural tube | 9.76e-13 | 40 |
pre-chordal neural plate | 1.23e-12 | 49 |
ecto-epithelium | 2.31e-12 | 73 |
brain grey matter | 2.62e-12 | 29 |
regional part of telencephalon | 2.62e-12 | 29 |
telencephalon | 2.62e-12 | 29 |
regional part of forebrain | 4.32e-12 | 39 |
forebrain | 4.32e-12 | 39 |
future forebrain | 4.32e-12 | 39 |
structure with developmental contribution from neural crest | 5.54e-09 | 92 |
cerebral cortex | 4.01e-08 | 21 |
cerebral hemisphere | 4.01e-08 | 21 |
pallium | 4.01e-08 | 21 |
regional part of cerebral cortex | 4.48e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.