FFCP PHASE1:Mm9::chr1:136456734..136456757,+: Difference between revisions
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|id=chr1:136456734..136456757,+ | |id=chr1:136456734..136456757,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.52e-10!33;CL:0000047!1.52e-10!33;CL:0000031!1.52e-10!33;CL:0000404!1.52e-10!33;CL:0000393!8.73e-09!39;CL:0000211!8.73e-09!39;CL:0000117!5.83e-08!23;CL:0000337!5.83e-08!23 | |ontology_enrichment_celltype=CL:0000540!1.52e-10!33;CL:0000047!1.52e-10!33;CL:0000031!1.52e-10!33;CL:0000404!1.52e-10!33;CL:0000393!8.73e-09!39;CL:0000211!8.73e-09!39;CL:0000117!5.83e-08!23;CL:0000337!5.83e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-10,33;CL:0000047,1.52e-10,33;CL:0000031,1.52e-10,33;CL:0000404,1.52e-10,33;CL:0000393,8.73e-09,39;CL:0000211,8.73e-09,39;CL:0000117,5.83e-08,23;CL:0000337,5.83e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.27e-11!102;UBERON:0000924!2.27e-11!102;UBERON:0006601!2.27e-11!102;UBERON:0001017!2.58e-11!73;UBERON:0005743!2.58e-11!73;UBERON:0000073!1.42e-10!75;UBERON:0001016!1.42e-10!75;UBERON:0003056!2.99e-10!49;UBERON:0002346!4.75e-10!71;UBERON:0003075!4.75e-10!71;UBERON:0007284!4.75e-10!71;UBERON:0000033!4.84e-10!63;UBERON:0002780!1.20e-09!39;UBERON:0001890!1.20e-09!39;UBERON:0006240!1.20e-09!39;UBERON:0000955!2.37e-09!50;UBERON:0006238!2.37e-09!50;UBERON:0003080!2.39e-09!40;UBERON:0002616!6.79e-09!49;UBERON:0000153!7.06e-09!94;UBERON:0001049!1.09e-08!52;UBERON:0005068!1.09e-08!52;UBERON:0006241!1.09e-08!52;UBERON:0007135!1.09e-08!52;UBERON:0007811!2.23e-08!86;UBERON:0002020!2.61e-08!34;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29 | |ontology_enrichment_uberon=UBERON:0004121!2.27e-11!102;UBERON:0000924!2.27e-11!102;UBERON:0006601!2.27e-11!102;UBERON:0001017!2.58e-11!73;UBERON:0005743!2.58e-11!73;UBERON:0000073!1.42e-10!75;UBERON:0001016!1.42e-10!75;UBERON:0003056!2.99e-10!49;UBERON:0002346!4.75e-10!71;UBERON:0003075!4.75e-10!71;UBERON:0007284!4.75e-10!71;UBERON:0000033!4.84e-10!63;UBERON:0002780!1.20e-09!39;UBERON:0001890!1.20e-09!39;UBERON:0006240!1.20e-09!39;UBERON:0000955!2.37e-09!50;UBERON:0006238!2.37e-09!50;UBERON:0003080!2.39e-09!40;UBERON:0002616!6.79e-09!49;UBERON:0000153!7.06e-09!94;UBERON:0001049!1.09e-08!52;UBERON:0005068!1.09e-08!52;UBERON:0006241!1.09e-08!52;UBERON:0007135!1.09e-08!52;UBERON:0007811!2.23e-08!86;UBERON:0002020!2.61e-08!34;UBERON:0002791!5.26e-08!29;UBERON:0003528!5.26e-08!29;UBERON:0001893!5.26e-08!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-11,73;UBERON:0004121,2.82e-11,95;UBERON:0000924,2.82e-11,95;UBERON:0006601,2.82e-11,95;UBERON:0010371,9.60e-11,73;UBERON:0001016,1.42e-10,75;UBERON:0003056,2.99e-10,49;UBERON:0002346,3.76e-10,64;UBERON:0003075,3.76e-10,64;UBERON:0007284,3.76e-10,64;UBERON:0002780,1.20e-09,39;UBERON:0001890,1.20e-09,39;UBERON:0006240,1.20e-09,39;UBERON:0000073,2.36e-09,54;UBERON:0003080,2.39e-09,40;UBERON:0000955,4.55e-09,47;UBERON:0006238,4.55e-09,47;UBERON:0001049,1.09e-08,52;UBERON:0005068,1.09e-08,52;UBERON:0006241,1.09e-08,52;UBERON:0007135,1.09e-08,52;UBERON:0002616,1.31e-08,46;UBERON:0002020,2.61e-08,34;UBERON:0003528,5.26e-08,29;UBERON:0002791,5.26e-08,29;UBERON:0001893,5.26e-08,29;UBERON:0010314,4.16e-07,92 | |||
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| ||
|short_description=p3@Kdm5b | |short_description=p3@Kdm5b | ||
}} | }} |
Revision as of 14:42, 14 November 2012
Short description: | p3@Kdm5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kdm5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2153 |
Association with transcript: | 0bp_to_ENSMUST00000047714, ENSMUST00000163900, NM_152895, uc007csf.2, uc007csg.2, uc011wsg.1_5end |
EntrezGene: | Kdm5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.52e-10 | 33 |
neuronal stem cell | 1.52e-10 | 33 |
neuroblast | 1.52e-10 | 33 |
electrically signaling cell | 1.52e-10 | 33 |
electrically responsive cell | 8.73e-09 | 39 |
electrically active cell | 8.73e-09 | 39 |
CNS neuron (sensu Vertebrata) | 5.83e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.83e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.58e-11 | 73 |
ectoderm-derived structure | 2.82e-11 | 95 |
ectoderm | 2.82e-11 | 95 |
presumptive ectoderm | 2.82e-11 | 95 |
ecto-epithelium | 9.60e-11 | 73 |
nervous system | 1.42e-10 | 75 |
pre-chordal neural plate | 2.99e-10 | 49 |
neurectoderm | 3.76e-10 | 64 |
neural plate | 3.76e-10 | 64 |
presumptive neural plate | 3.76e-10 | 64 |
regional part of forebrain | 1.20e-09 | 39 |
forebrain | 1.20e-09 | 39 |
future forebrain | 1.20e-09 | 39 |
regional part of nervous system | 2.36e-09 | 54 |
anterior neural tube | 2.39e-09 | 40 |
brain | 4.55e-09 | 47 |
future brain | 4.55e-09 | 47 |
neural tube | 1.09e-08 | 52 |
neural rod | 1.09e-08 | 52 |
future spinal cord | 1.09e-08 | 52 |
neural keel | 1.09e-08 | 52 |
regional part of brain | 1.31e-08 | 46 |
gray matter | 2.61e-08 | 34 |
brain grey matter | 5.26e-08 | 29 |
regional part of telencephalon | 5.26e-08 | 29 |
telencephalon | 5.26e-08 | 29 |
structure with developmental contribution from neural crest | 4.16e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.