FFCP PHASE1:Mm9::chr17:30366106..30366115,-: Difference between revisions
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|id=chr17:30366106..30366115,- | |id=chr17:30366106..30366115,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.06e-49!10;UBERON:0000411!1.06e-49!10;UBERON:0001950!1.06e-49!10;UBERON:0002619!1.91e-34!17;UBERON:0000956!7.85e-33!21;UBERON:0001869!7.85e-33!21;UBERON:0000203!7.85e-33!21;UBERON:0002791!2.58e-23!29;UBERON:0003528!2.58e-23!29;UBERON:0001893!2.58e-23!29;UBERON:0002780!7.04e-20!39;UBERON:0001890!7.04e-20!39;UBERON:0006240!7.04e-20!39;UBERON:0002020!1.24e-19!34;UBERON:0003080!2.46e-19!40;UBERON:0002616!5.87e-18!49;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0003056!1.96e-15!49;UBERON:0001049!1.97e-14!52;UBERON:0005068!1.97e-14!52;UBERON:0006241!1.97e-14!52;UBERON:0007135!1.97e-14!52;UBERON:0000033!1.65e-13!63;UBERON:0001017!2.27e-11!73;UBERON:0005743!2.27e-11!73;UBERON:0000073!5.20e-11!75;UBERON:0001016!5.20e-11!75;UBERON:0002346!4.85e-10!71;UBERON:0003075!4.85e-10!71;UBERON:0007284!4.85e-10!71;UBERON:0007811!2.51e-09!86;UBERON:0000153!2.39e-08!94;UBERON:0004121!1.61e-07!102;UBERON:0000924!1.61e-07!102;UBERON:0006601!1.61e-07!102 | |ontology_enrichment_uberon=UBERON:0002021!1.06e-49!10;UBERON:0000411!1.06e-49!10;UBERON:0001950!1.06e-49!10;UBERON:0002619!1.91e-34!17;UBERON:0000956!7.85e-33!21;UBERON:0001869!7.85e-33!21;UBERON:0000203!7.85e-33!21;UBERON:0002791!2.58e-23!29;UBERON:0003528!2.58e-23!29;UBERON:0001893!2.58e-23!29;UBERON:0002780!7.04e-20!39;UBERON:0001890!7.04e-20!39;UBERON:0006240!7.04e-20!39;UBERON:0002020!1.24e-19!34;UBERON:0003080!2.46e-19!40;UBERON:0002616!5.87e-18!49;UBERON:0000955!1.47e-17!50;UBERON:0006238!1.47e-17!50;UBERON:0003056!1.96e-15!49;UBERON:0001049!1.97e-14!52;UBERON:0005068!1.97e-14!52;UBERON:0006241!1.97e-14!52;UBERON:0007135!1.97e-14!52;UBERON:0000033!1.65e-13!63;UBERON:0001017!2.27e-11!73;UBERON:0005743!2.27e-11!73;UBERON:0000073!5.20e-11!75;UBERON:0001016!5.20e-11!75;UBERON:0002346!4.85e-10!71;UBERON:0003075!4.85e-10!71;UBERON:0007284!4.85e-10!71;UBERON:0007811!2.51e-09!86;UBERON:0000153!2.39e-08!94;UBERON:0004121!1.61e-07!102;UBERON:0000924!1.61e-07!102;UBERON:0006601!1.61e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.50e-56,10;UBERON:0000411,6.50e-56,10;UBERON:0001950,6.50e-56,10;UBERON:0002619,7.52e-33,17;UBERON:0000956,1.47e-26,21;UBERON:0001869,1.47e-26,21;UBERON:0000203,1.47e-26,21;UBERON:0003528,3.64e-19,29;UBERON:0002791,3.64e-19,29;UBERON:0001893,3.64e-19,29;UBERON:0002020,2.66e-16,34;UBERON:0002780,3.61e-14,39;UBERON:0001890,3.61e-14,39;UBERON:0006240,3.61e-14,39;UBERON:0003080,8.33e-14,40;UBERON:0002616,5.90e-12,46;UBERON:0000955,1.08e-11,47;UBERON:0006238,1.08e-11,47;UBERON:0003056,3.37e-11,49;UBERON:0001049,1.58e-10,52;UBERON:0005068,1.58e-10,52;UBERON:0006241,1.58e-10,52;UBERON:0007135,1.58e-10,52;UBERON:0000073,4.02e-10,54;UBERON:0001851,5.62e-10,1;UBERON:0005889,5.62e-10,1;UBERON:0002346,1.81e-08,64;UBERON:0003075,1.81e-08,64;UBERON:0007284,1.81e-08,64;UBERON:0010371,2.32e-07,73;UBERON:0001017,2.32e-07,73;UBERON:0001016,3.77e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,1.79000820131231,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,4.14292712856459,6.30185064783336,4.46818274093588,0.685082519770642,6.0431511791176,2.02506750069542,0.45032120322422,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,1.79000820131231,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,4.14292712856459,6.30185064783336,4.46818274093588,0.685082519770642,6.0431511791176,2.02506750069542,0.45032120322422,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:30366106..30366115,- | |short_description=p@chr17:30366106..30366115,- | ||
}} | }} |
Revision as of 14:16, 14 November 2012
Short description: | p@chr17:30366106..30366115, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:30366106..30366115, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.50e-56 | 10 |
visual cortex | 6.50e-56 | 10 |
neocortex | 6.50e-56 | 10 |
regional part of cerebral cortex | 7.52e-33 | 17 |
cerebral cortex | 1.47e-26 | 21 |
cerebral hemisphere | 1.47e-26 | 21 |
pallium | 1.47e-26 | 21 |
brain grey matter | 3.64e-19 | 29 |
regional part of telencephalon | 3.64e-19 | 29 |
telencephalon | 3.64e-19 | 29 |
gray matter | 2.66e-16 | 34 |
regional part of forebrain | 3.61e-14 | 39 |
forebrain | 3.61e-14 | 39 |
future forebrain | 3.61e-14 | 39 |
anterior neural tube | 8.33e-14 | 40 |
regional part of brain | 5.90e-12 | 46 |
brain | 1.08e-11 | 47 |
future brain | 1.08e-11 | 47 |
pre-chordal neural plate | 3.37e-11 | 49 |
neural tube | 1.58e-10 | 52 |
neural rod | 1.58e-10 | 52 |
future spinal cord | 1.58e-10 | 52 |
neural keel | 1.58e-10 | 52 |
regional part of nervous system | 4.02e-10 | 54 |
cortex | 5.62e-10 | 1 |
zygote cortex | 5.62e-10 | 1 |
neurectoderm | 1.81e-08 | 64 |
neural plate | 1.81e-08 | 64 |
presumptive neural plate | 1.81e-08 | 64 |
ecto-epithelium | 2.32e-07 | 73 |
central nervous system | 2.32e-07 | 73 |
nervous system | 3.77e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.